| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_021214 | 358,511 | 0 | G | A | 33.5% | 232.5 / 65.7 | 159 | intergenic (‑93/‑92) | TMARI_RS01730/TMARI_RS01735 | hypothetical protein/DUF2089 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (14/91); new base A (53/0); total (68/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-29 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 160 total aligned reads displayed.
CATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCT > NC_021214/358276‑358745 | cATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAgggg > 1:328881/1‑239 (MQ=255) aTCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGc < 1:902899/239‑1 (MQ=255) gAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGCGACg > 1:247907/1‑239 (MQ=255) aaTATTAAGCACAAAATACGAAGTAAGAATTATCTTTTCCTTTCCTGTCCTATCTTCTCGCTGAGAATGGCTATAAACACATCTACCGGTATCACAACAAACATTTTCCGCACCTCCTTTTTGAGAATAATGCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAAACTCGTTTCGCGG‑CAGGAAAAGGGGCACCg < 2:788315/238‑1 (MQ=255) aGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGAGGAGAAG‑aaaaaaac > 2:372639/1‑235 (MQ=255) cacaAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGGAGGGGAAAAGGGGGaaaa‑aaaaaacaa > 2:1303273/1‑234 (MQ=255) aaaaTAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGGAAAG‑aaaaaactttcaa > 2:1082632/1‑230 (MQ=255) aaTAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTGAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGCAACG‑AAAAAC‑CTTTC‑AG‑aa > 1:836653/1‑239 (MQ=255) aataatTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAAGGGAAAG‑AAAAACACTAAC‑AA‑AAAAAt‑ttttt > 2:736065/1‑239 (MQ=255) aataatTATCTGTTCCTTTTCTGTCCTAACTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAt‑tttttt < 2:670393/239‑1 (MQ=255) ttATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATTGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTAGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGgaga < 1:1287982/239‑1 (MQ=255) ttATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGgaga < 1:1095979/239‑1 (MQ=255) ttATCTGTTCCTTTTCTGTCCTAGATTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATAAACACAAACATTTTTCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATAACGATTAACGG‑CGGAGAAAGAGGAAGAT‑AAAAAC‑CGTAC‑AG‑CAAAATGTTTTTTgggg > 2:752013/1‑237 (MQ=255) tATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGCAACG‑AAAAAC‑CTTAC‑AG‑AAAAAA‑TTTTTTTgagaa > 1:459852/1‑238 (MQ=255) tCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTTGTTTCACGG‑CGGGAAAAGGGGAAACG‑AAAAAA‑ATTAA‑AG‑AAAAAA‑TTTTTTGGGGACtt > 1:268971/1‑239 (MQ=255) ttCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAATC‑CTTAC‑AA‑AAAAAT‑TTTTTTTGTGACTTGAC‑a > 1:1052223/1‑239 (MQ=255) tCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑a < 1:132241/238‑1 (MQ=255) tCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCAGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCGCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑a < 2:1257599/238‑1 (MQ=255) cTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGCAACG‑AAAAAA‑CTTAA‑AG‑AAAAAA‑TTTTTTGGTGAGTTGAC‑aaaa > 2:419773/1‑239 (MQ=255) cTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGGCACG‑AAAAAA‑CTTAC‑AG‑AAAAAA‑TTTTTTTTGGACTTGAC‑aaaaaaatt > 1:911927/1‑234 (MQ=255) cTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAACGAGGAACC‑AAAAAC‑ATTACAAC‑AAAAAA‑TTTTTTTGTG‑CTTGAC‑aaaaaaatt > 2:543405/1‑234 (MQ=255) gTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGGAAAG‑AAAAAC‑CTTTC‑AA‑AAAAAA‑TTTTTTTGTGAATTTAA‑AAAAAAttttg > 1:216964/1‑237 (MQ=255) gTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGAGGGAAAG‑AAAATG‑CTTTC‑AT‑AAAAAT‑TTTTTTTGAGTCTTTTC‑CAAATAattag > 1:965949/1‑237 (MQ=255) aTCTTCTCGCTGTGAATGGCTATCAACCCATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAata < 2:916758/239‑1 (MQ=255) aTCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAata < 2:685590/239‑1 (MQ=255) aTCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAata < 1:79272/239‑1 (MQ=255) cttctCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATAtt < 1:1157406/239‑1 (MQ=255) tcGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGGAAAG‑AAAAAC‑CATAC‑AGAAAAAAT‑TTTTTTTGGGAC‑TGACAAAAAAATTTGGTaaattttta > 2:615037/1‑232 (MQ=255) cGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTaaa < 1:1157632/239‑1 (MQ=255) agCTGTGACTGGCTATCAACACATCTACCAGTATCAACACAAACATTTTCCTCACCTCCTTATTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAATGAAAATCGCGTTTCACGT‑CGGGAAAAGGGGCAGCG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTaaa < 2:336657/238‑1 (MQ=255) gcggtgAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCTTCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTaaaa < 2:756942/236‑1 (MQ=255) gCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTaaaa < 1:680964/239‑1 (MQ=255) gAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGTAAAAAGGGCAAAA‑AAAAAC‑CCTTA‑AA‑AAAAAT‑TTTTTTTTCACGATGAC‑AAAATATTTTTTGATATACTAAAATA‑ttt > 1:1066626/1‑239 (MQ=255) gAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAAAC‑CTTAC‑AG‑AAAAAA‑TTTTTTGGTGACTTGAC‑ACAAAATTTGATATTATTTTCAAATA‑ttt > 2:46668/1‑239 (MQ=255) tATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGATAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCagg < 2:896704/238‑1 (MQ=255) tATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGCAACGAAAAAAC‑CTTCT‑GA‑AAAAAT‑TTTTTTGGA‑AATTTAA‑AAAAAATTTTGGAATATTTTAAAAAA‑TTTTTTagga > 1:620309/1‑239 (MQ=255) aTCAACACATCTACCGGTATCAACACAAACATTTTCCTCCCCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCaggag < 2:412177/239‑1 (MQ=255) tCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAAAG‑AAAAAA‑CTTTC‑AA‑AAAAAA‑TTTTTTTGGGACCTTAC‑AAAATAATTTGTTATATTTTTAAATA‑TTTTTCaggggg > 1:486708/1‑239 (MQ=255) cAACACATCTTCCGGTCTCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGt < 1:222116/239‑1 (MQ=255) cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGt < 2:834426/239‑1 (MQ=255) cAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGt < 1:1112072/239‑1 (MQ=255) aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTg < 2:1168723/239‑1 (MQ=255) aaCACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTg < 1:517093/239‑1 (MQ=255) caTCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACaa < 2:328881/239‑1 (MQ=255) tCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAata‑t < 1:1168770/220‑1 (MQ=255) tCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACaaaa < 1:766745/239‑1 (MQ=255) aTCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGCAACG‑AAAAAA‑CTTTC‑AA‑AAAAAT‑TTTTTTTGTGACTTGAC‑AAAATATTTTGTAATATTCTAAAATA‑TTTTTCATGAGGTGACAAAAT‑AATTTGc > 1:721042/1‑238 (MQ=255) tCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGccc < 1:816092/239‑1 (MQ=255) cAACACAAACATTTTCCTCACCTCCATTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCa < 1:1147689/239‑1 (MQ=255) acaAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGGACA‑AAAAAC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTTAC‑AAAAAATTTTGTAATATTTTCAAAAA‑TTTTGTAGGAGGTGAAAAAAT‑ATGTTGGCCAAga > 1:374172/1‑237 (MQ=255) aaaCATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGcc < 2:46431/239‑1 (MQ=255) aaaCATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAAGTATATGTAAAGAAAATCTCGTTTCACGG‑CGAGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGcc < 2:185753/239‑1 (MQ=255) tCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAAAG‑AAAAAC‑ATTTC‑AC‑AAAAAA‑TTTTTTGGAGGAGTGAC‑AAAAAAATTTGTAATATTCTAAAAAA‑TTTTTTAGGAGGGGACAAAATAATTTTGTCCAATGGCCCGTTcgt > 2:306080/1‑237 (MQ=255) tCACCTCCTTGTTTATAATAAGTCTACTCTTTCACATAAGAGTGTACCTGCGGTGTATTACAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAAGCTCGTTTCTCGG‑CGGGAAAAGGGCCAACG‑AAAATC‑CTTAC‑AT‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAAGTGACAAAAT‑ATGTTGCCCAATTGCCCGGTCTGTGGa < 2:774903/239‑1 (MQ=255) cctTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGaa < 1:211747/239‑1 (MQ=255) tttGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑a < 1:1397654/239‑1 (MQ=255) agaATAATTCGCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAAGATGCTAAAATA‑GTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGt < 2:283901/239‑1 (MQ=255) aataatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGCAAAG‑AAAAAC‑CTTAC‑AG‑AAAAAA‑TTTTTTGGAGAAATGAC‑AAAAAAATTGGTAATATTCTAAAAAATTTTTGAAGTGGGGGACAAAAT‑‑TGTTGTCCAAAGGCCCGGTCTGGGGGAAGAAAATG‑ATaataa > 2:583668/1‑235 (MQ=255) ataatTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGGAACA‑AAAAAA‑CTTAA‑AA‑AAAAAA‑TTTTTTTTGGAATTTAC‑AAAAAATTTTGTAATATTTTTAAAAA‑TTTTTTTGGAGGTGGAAAAAA‑ATTTTGTCCACATGTCCCGTTTTTGGGAAAAAAAAA‑ATAATTaa > 2:176474/1‑238 (MQ=255) aaaatTCTGAGCGTACACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAAGTCTAACTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAG‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATAGTCGAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGGGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTa < 2:1346959/236‑1 (MQ=255) aTCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCa < 1:783908/239‑1 (MQ=255) tttCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTg < 1:1188159/239‑1 (MQ=255) tCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTTGAGACTTTAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTTCAGGAGGTGACAAAAA‑AATTTGCCCAAATGCCCGGTCTGTGGGAAAGAAATG‑ATAGTTACAGAGCTTTACTGCa > 1:1018303/1‑239 (MQ=255) cacaTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAAGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCaa < 1:635894/239‑1 (MQ=255) cacaTAAGAGTGTACCACCGGTGTATGAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCaa < 2:215694/239‑1 (MQ=255) caTAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCagga < 1:1233332/167‑1 (MQ=255) gagTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCg < 1:1243532/191‑1 (MQ=255) gagTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAAAC‑CTTTC‑AG‑AAAAAA‑TTTTTTTGGGAATTTAC‑AAAAAATTTTGTAATATTTTAAAAAA‑TTTTTTAGGAGGTGACAAAAA‑ATATTGCCCCAATGCCCGGGCTGTGGGAAAGAAAAG‑ATATTTAAAGAGCTTCACTGCCAAAAAGAt > 1:776804/1‑239 (MQ=255) gtgtACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGCAAAG‑AAAAAA‑CTTAC‑AG‑AAAAAT‑TTTTTTTGAGACTTTAC‑AAAAAATTTGGTAAAATTCTAAAAAA‑TTTTTTAGGAGGGGACAAAAA‑ATGTTGCCCAAATGCCCGGTCTGTGGGAAAGAAATG‑ATAGGTACAAAGATTCACTGCaaaaaaaagga > 1:1259415/1‑232 (MQ=255) gtACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAAAC‑CTTAC‑AG‑AAAAAA‑TTTTTTTGAGACTTGAC‑AAAAAATTTTGTAATATTTTAAAAAA‑ATTTTCAGGAGGGGACAAAAA‑AAGTTTCCCAAATGCCCCGTCTGTGGGAAAGAAAAG‑ATAGTTACAAAGCTTCACTGCAAAAAAGATGA‑gg > 1:435875/1‑239 (MQ=255) gtACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATGATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑g < 2:1155879/238‑1 (MQ=255) accaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGt < 1:1315154/238‑1 (MQ=255) accaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGt < 1:787630/238‑1 (MQ=255) accacaGGTATAGTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGTGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCATGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGt < 2:1009095/238‑1 (MQ=255) ccaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCa < 1:1260988/239‑1 (MQ=255) ccaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCa < 2:775919/239‑1 (MQ=255) ccaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCa < 1:928087/239‑1 (MQ=255) ccaccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCa < 1:625222/239‑1 (MQ=255) caccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGcc < 1:779290/181‑1 (MQ=255) ccGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGGAAAAGGGCAAAG‑AAAAAC‑CTTAC‑AG‑AAAAAA‑TTTTTTTGAGACTTGAC‑AAAAAATTTGGTAATATTTTAAAATA‑ATTTTCCGGAGGTGACAAAAA‑ATGTTTGCCAAATGGCCGGGCTGGGGAAAAGAAATG‑ATAGGTAAAGAGCTTCACCGCAAAAAAAATggagtgcacg > 1:858305/1‑230 (MQ=255) cGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGTGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTa < 1:1100374/205‑1 (MQ=255) gtgtATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAAAA‑CTTAC‑AG‑AAAAAT‑TTTTTTTGGGACTTTAC‑AAAAAATTTGGGAATATTTTAAAAAA‑TTTTTTAGGAGGGGACAAAAT‑ATGTTGTCCCAATGCCCGGGCTGTGGGAAAGAAAAG‑ATAAGTAAAAAACTTTACTGCAAAAAAGAAGA‑GGTGACCggtg > 1:1037351/1‑236 (MQ=255) gtgtATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAAAA‑CTTAA‑AA‑AAAAAA‑TTTTTTTGAGAATTGAC‑AAAAAATTTTGGAAAATTCTAAAAAA‑TTTTTCATGGGGGGAGAAAAA‑ATATTTCCCAAATGCCCGGTATGTGGGAAAAAAATGAAAAGTTA‑AGAGCTTACAAGCAAAAAAGATGA‑GGGCACCgcgg > 2:442908/1‑236 (MQ=255) gtgtATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAAGGGAAAG‑AAAAAA‑ATTAA‑AG‑AAAAAA‑TTTTTTTGAGACTTGAC‑AAAAAATTTGTTAATATTTTAAAAAA‑ATTTTCAGGGGGGGGTAAAAT‑AAGTTGTCCAAATTCCCGGCCGTTGGGAAAAAAATG‑ATATTTACAAAGATTCCATCTAAAAAAGATGA‑gggaacactgc > 2:22156/1‑230 (MQ=255) ttAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGa < 1:740013/239‑1 (MQ=255) ttAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGa < 1:600749/239‑1 (MQ=255) aaTCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGttt < 1:1111002/239‑1 (MQ=255) aTTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTTGAGACTTGAC‑AAAAAATTTGGTAATATTCTAAAATA‑TTTTTCAGGAGGTGACAAAAT‑ATTTTTCCCAAGAGCCCGGGCTGTGGGAAAAAAATG‑ATAGTTACAGAACTTTCCTGCCAAAAAGATGG‑GGGCACCGGGCGGGGAAGGTTCAGGGCGGGTCCGtttggtt > 1:515410/1‑234 (MQ=255) aTTATATGTAAAGAAAATCTCGTCTCACGG‑CGGGAAAAGGGGGAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTTAC‑AAAAAATTTGGTAATATTCTAAAATA‑TTTTTCAGGAGGGGACAAAAT‑ATGTTGCCCAAATGCCCGGGCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCCAAAAAGATGA‑GGTCACCCGGCGAGGACGTTTTAGAGGGAGGCCGTTCGAtt > 1:926553/1‑239 (MQ=255) tatGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTtct < 1:752013/239‑1 (MQ=255) tGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGGAACG‑AAAAAC‑CTTAC‑AG‑AAAAAT‑TTTTTTTGAGACTTTAC‑AAAATATTTTGGAATATTTTAAAAAA‑TTATGCAGGAGGGGACAAAAT‑ATGTTGCCCCAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGGCACCGTGCGAGGACGTTTCAGAGGGGGGCCGTTCGAtttttttg > 1:118384/1‑235 (MQ=255) tGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAAGGGGGAAG‑AAAAAC‑CTTTA‑AG‑AAAAAT‑TTTTTTTTGGACGTTAA‑AAAAAATTTTGTTATATTTTAAAAAA‑ATTTTTAGGGGGGGAAAAAAA‑AATTTTTCCAAGAGCCCCGTCTGTGTGAAAGAAAAG‑AAAATTATAAGGGTTTACTGCAAAGGAGATGAGGGTACCCGTGC‑AGGGAGTTTCTGAGCAGGGCCGTTTGGTTTTTTCg > 2:87715/1‑239 (MQ=255) aaaGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGAt < 1:225858/238‑1 (MQ=255) aaaTCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGAc < 1:345943/239‑1 (MQ=255) aaaTCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGAc < 1:138832/239‑1 (MQ=255) tcGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCt < 1:748201/239‑1 (MQ=255) cGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAANG‑NTAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTc < 2:96392/239‑1 (MQ=255) ttCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGa < 1:1032899/238‑1 (MQ=255) gAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGAtt < 1:165448/238‑1 (MQ=255) aaaGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCt < 1:737060/238‑1 (MQ=255) | CATCGGAATATTAAGCACAAAATAAGAATTAATAATTATCTGTTCCTTTTCTGTCCTATCTTCTCGCTGTGAATGGCTATCAACACATCTACCGGTATCAACACAAACATTTTCCTCACCTCCTTTTTGAGAATAATTCTCATCTTTCACATAAGAGTGTACCACCGGTGTATTAAAAATCAAATAAGGCAATACTAATTATATGTAAAGAAAATCTCGTTTCACGG‑CGGGAAAAGGGGCAACG‑AAAATC‑CTTAC‑AG‑AAAAAT‑TTTTTTGGAGACTTGAC‑AAAATATTTGGTAATATTCTAAAATA‑TTTTGCAGGAGGTGACAAAAT‑ATGTTGCCCAAGTGCCCGGTCTGTGGAAAAGAAATG‑ATAGTTACAGAGCTTCACTGCAAAAGAGATGA‑GGTCACCGTGCGAGGACGTTTCAGAGCGAGTCCGTTCGATTTTCTCGATAAAGACGAGCTCGAGTTCGTGATTCT > NC_021214/358276‑358745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |