New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 3426096315 (1.000)3 (0.010)
+ACGGAACGGC		 3/232 NT 1.1% intergenic (‑120/+217) ctpB/ftsX carboxy‑terminal processing protease CtpB/permease‑like cell division protein FtsX
?NZ_CP034943 3426305 = 290 (0.920)intergenic (‑329/+8) ctpB/ftsX carboxy‑terminal processing protease CtpB/permease‑like cell division protein FtsX
Rejected: Frequency below/above cutoff threshold.

Only 100 of 324 total aligned reads displayed.

TTTCAACATTCGCTGTGCTTCGATGCTTGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATGATCCTTG  >  NZ_CP034943/3426166‑3426444
                                                                                                                                           |                                                                                                                                            
tttCAACATTCGCTGTGCTTCGATGCTTGTTTGGTCCTAGAGTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCAAAACCGTATTAGTTATGATTCTGTCAACATAGTGTAAACGCACCGAGAACGGGACGttt                                                                                                                                              >  1:4864987/1‑140 (MQ=38)
  tCAACATTCGCTGTGCTTCGATGCTTGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGttttt                                                                                                                                            <  2:2453580/140‑1 (MQ=255)
  tCAACATTCGCTGTGCTTCGATGCTTGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGttttt                                                                                                                                            <  2:4129845/140‑1 (MQ=255)
            cTGTGCTTCGATGCGTGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAACAATGACAAAATCCCAAACCGTTTTAGTTAGGATTCTGTCAACAGTCCGGAAACGCCCCGAGAACGCGACGTTTTTTTC‑TTTtata                                                                                                                                 <  2:1690337/140‑1 (MQ=255)
                         cTTGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACtt                                                                                                                    >  2:4006550/1‑140 (MQ=255)
                           tGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTA‑TTTTATACTCGCAGaaaatagc                                                                                                                  >  1:2050680/1‑135 (MQ=255)
                            gTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACTGGACGTTTTTTTC‑TTTTATACTCGCAGAAACGTGCg                                                                                                                 >  2:3420798/1‑140 (MQ=255)
                            gTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTA‑TTTTATACTCGCAGAAACTTGCg                                                                                                                 >  1:638401/1‑140 (MQ=255)
                            gTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACAGTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCg                                                                                                                 >  1:5007578/1‑140 (MQ=255)
                               tGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGAt                                                                                                              <  1:10781/140‑1 (MQ=255)
                                gCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAACAGCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCGGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAACCTTGCGGATg                                                                                                             <  2:526674/140‑1 (MQ=255)
                                gCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAACTCCTAACCCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATg                                                                                                             <  1:4379553/140‑1 (MQ=255)
                                 cTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTG‑TTTTATACTCGCAGAAACTTGCGGATgg                                                                                                            >  1:1784837/1‑140 (MQ=255)
                                 cTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATgg                                                                                                            >  1:1348097/1‑140 (MQ=255)
                                 cTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATgg                                                                                                            >  1:2621177/1‑140 (MQ=255)
                                  tCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGa                                                                                                           <  1:2314438/140‑1 (MQ=255)
                                    cTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAg                                                                                                         >  2:1375173/1‑140 (MQ=255)
                                     tAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGt                                                                                                        <  2:4904378/140‑1 (MQ=255)
                                      aGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTc                                                                                                       >  2:81049/1‑140 (MQ=255)
                                       gACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCa                                                                                                      <  2:2527867/140‑1 (MQ=255)
                                       gACGTCGGGTTTTTAATCACGCTAAAAAAATGACAAACTCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCa                                                                                                      <  1:1605918/140‑1 (MQ=255)
                                         cTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGa                                                                                                    <  2:2351135/140‑1 (MQ=255)
                                         cTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGa                                                                                                    <  1:4588688/140‑1 (MQ=255)
                                          ttCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGAc                                                                                                   <  1:4252366/140‑1 (MQ=255)
                                           tCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACt                                                                                                  <  2:2132511/140‑1 (MQ=255)
                                           tCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACt                                                                                                  <  1:733851/140‑1 (MQ=255)
                                           tCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACt                                                                                                  <  2:2985473/140‑1 (MQ=255)
                                            ccggTTTTTAGTCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGTATTGTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTAATTTG‑TGTTATAATCGCAGAAACTTGCGGATTGAAGTCAGACtt                                                                                                 >  2:1007623/3‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGAcat                                                                                                 >  1:1003824/1‑138 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:2299233/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:931521/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  1:1315856/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:4254654/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:4061800/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:3844232/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:2966551/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACtt                                                                                                 >  2:192618/1‑140 (MQ=255)
                                            cGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTGTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACt                                                                                                  >  2:2625565/1‑139 (MQ=255)
                                            aaaacctagagatagtatatgtaaaggatggagatttcatgtaatcatagaagaaaaagaaggcaaatgaaaagccgtcccgaaaacggaacggcTTTTTCACTTTATACTCGCAGAAACTTGCGGATGGAAGt                                                                                                        <  1:569948‑M2/39‑1 (MQ=255)
                                              ggTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcc                                                                                               <  1:4632056/140‑1 (MQ=255)
                                              ggTTTTTAATCACGATAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcc                                                                                               <  1:1669051/140‑1 (MQ=255)
                                                tttttAATCACGCTAGAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATCCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  1:149287/140‑1 (MQ=255)
                                                tttttAATCACGCTAAAAAAATGACAAAATCCTAAACGCTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCGCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  1:1877516/140‑1 (MQ=255)
                                                tttttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAGGTCAGACTTcccc                                                                                             <  1:3197802/140‑1 (MQ=255)
                                                tttttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  1:4176865/140‑1 (MQ=255)
                                                tttttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  1:3430622/140‑1 (MQ=255)
                                                tttttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  1:3006306/140‑1 (MQ=255)
                                                tatttACTCACGCTAAAAAAATGCCAAAATCCTAAACCGTATGACTGAGGATTCTGTCAACATTCTCGCAACGCCCCGAGAACGGGACGATTTTTTC‑TATTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  2:2929755/138‑1 (MQ=255)
                                                 ttttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACTTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCa                                                                                            <  2:2687499/140‑1 (MQ=255)
                                                 ttttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCa                                                                                            <  2:3802500/140‑1 (MQ=255)
                                                  tttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCAt                                                                                           <  1:3458299/140‑1 (MQ=255)
                                                  tttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCAt                                                                                           <  1:4675912/140‑1 (MQ=255)
                                                  tttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCAt                                                                                           <  1:4201607/140‑1 (MQ=255)
                                                  tttAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCAt                                                                                           <  1:2800105/140‑1 (MQ=255)
                                                    tAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATAc                                                                                         <  1:1709716/140‑1 (MQ=255)
                                                         aCGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  2:3898372/131‑1 (MQ=255)
                                                         aCGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             >  1:3898372/1‑131 (MQ=255)
                                                         aCGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACAGTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCaa                                                                                    >  2:4058023/1‑140 (MQ=255)
                                                                 aaaaTGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTgcg                                                                            <  1:3142875/140‑1 (MQ=255)
                                                                     tGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGa                                                                        <  1:3347432/140‑1 (MQ=255)
                                                                     tGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGa                                                                        <  1:4753353/140‑1 (MQ=255)
                                                                       aCAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACCTTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGAtt                                                                      <  2:2073645/140‑1 (MQ=255)
                                                                       aCAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGAtt                                                                      <  2:3625744/140‑1 (MQ=255)
                                                                        aaaaaTCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTg                                                                     <  1:3791433/139‑1 (MQ=255)
                                                                            aTCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGcaac                                                                 <  1:2683043/140‑1 (MQ=255)
                                                                               cTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAg                                                              <  1:249924/140‑1 (MQ=255)
                                                                               cTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAg                                                              <  1:5161065/140‑1 (MQ=255)
                                                                                tAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCACCATACTCCAATTACTGCGCCGATTGCAACAAGc                                                             >  2:1285623/1‑140 (MQ=255)
                                                                                 aaaCCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCa                                                            <  2:2665015/140‑1 (MQ=255)
                                                                                       ttttAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACg                                                      >  1:2255442/1‑140 (MQ=255)
                                                                                        tttAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGa                                                     >  2:2391623/1‑140 (MQ=255)
                                                                                               agGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACCAGCACTAACGAAATTTgg                                              <  2:4683311/140‑1 (MQ=255)
                                                                                               agGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTgg                                              <  1:4475286/140‑1 (MQ=255)
                                                                                                ggATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGa                                             <  1:3615512/140‑1 (MQ=255)
                                                                                                      tGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTTCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAACCACTAAAGAAATTTGGAATACaa                                       >  1:213688/1‑140 (MQ=255)
                                                                                                      tGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTACCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTTGAATaaaa                                       >  1:4006612/1‑140 (MQ=255)
                                                                                                       gTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACaaa                                      <  2:3239812/140‑1 (MQ=255)
                                                                                                         cAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATg                                    <  2:3109356/140‑1 (MQ=255)
                                                                                                         cAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATg                                    <  2:4309145/140‑1 (MQ=255)
                                                                                                         cAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATg                                    <  1:2873453/140‑1 (MQ=255)
                                                                                                                      aCGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACATCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATTGATTATAAGgacg                       >  2:4387384/1‑138 (MQ=255)
                                                                                                                        gCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             <  1:5186543/68‑1 (MQ=255)
                                                                                                                        gCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGgaagaa                     <  2:709599/140‑1 (MQ=255)
                                                                                                                        gCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGgaagaa                     <  1:4960309/140‑1 (MQ=255)
                                                                                                                        gCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGgaagaa                     <  2:5007578/140‑1 (MQ=255)
                                                                                                                        gCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTAGCAGAAACTTGCGGATGGAAGTCAGACTTcccc                                                                                             >  2:5186521/1‑68 (MQ=255)
                                                                                                                         ccccGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACt                                                                                                  >  2:1031916/1‑62 (MQ=255)
                                                                                                                            cGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAgaga                 <  1:3034110/140‑1 (MQ=255)
                                                                                                                            cGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAgaga                 <  1:2567768/140‑1 (MQ=255)
                                                                                                                                   gggACGTTTTTTTG‑TTTTATACTCGCAGAAACTTGCGGATTGAAGTCAGACTTCCCCATAATCCAATTAATGCGCCGATTGCAACAAGCACAAACGAAATTTGGAATAAAAATGGATTATAATGAAGAAGAGAaaaaaaa          >  1:122429/1‑139 (MQ=255)
                                                                                                                                   gggACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAAt          <  1:81049/140‑1 (MQ=255)
                                                                                                                                   gggACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAAt          <  1:2967399/140‑1 (MQ=255)
                                                                                                                                   gggACGTTTTTTTC‑TTTTAGACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCACTTACTGCGCCGAGTGCAACAAGCACTACCGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAAt          <  2:619911/140‑1 (MQ=255)
                                                                                                                                    ggACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATg         >  2:1136177/1‑140 (MQ=255)
                                                                                                                                    ggACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATg         <  2:1601139/140‑1 (MQ=255)
                                                                                                                                      aCGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAAcccggcta       <  1:1996788/140‑8 (MQ=255)
                                                                                                                                       cGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATGATc      <  2:3458018/140‑1 (MQ=255)
                                                                                                                                          ttttttC‑TTTTATACTCGCAGAAAATTGCGGATGGAAGTCCGACTTCCCCATACTCCAATTACTGCGCCGATTGCAAAAAGCACTAACGAAATTTGGAATACAAAAGGATTATAATGAAGAAGAGAAACAAAAGATACtt   >  2:4354324/1‑140 (MQ=255)
                                                                                                                                           tttttC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATGATCCTTg  <  2:1315856/140‑1 (MQ=255)
                                                                                                                                           tttttC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATGATCCTTg  <  2:260047/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
TTTCAACATTCGCTGTGCTTCGATGCTTGTTTGCTCCTAGACTTCGGGTTTTTAATCACGCTAAAAAAATGACAAAATCCTAAACCGTTTTAGTTAGGATTCTGTCAACATTCTGGAAACGCCCCGAGAACGGGACGTTTTTTTC‑TTTTATACTCGCAGAAACTTGCGGATGGAAGTCAGACTTCCCCATACTCCAATTACTGCGCCGATTGCAACAAGCACTAACGAAATTTGGAATACAAATGGATTATAAGGAAGAAGAGAAACAAATGATCCTTG  >  NZ_CP034943/3426166‑3426444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.