| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4532499 = | 68 (0.640) | 10 (0.100) | 10/276 | 11.7 | 11.8% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | CP009273 | 4532813 = | 86 (0.870) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTG > CP009273/4532667‑4532959 | aCGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCaaacg > 2:39671/1‑147 (MQ=255) aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc < 2:691296/149‑1 (MQ=255) tCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAACGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGtt < 1:1414530/146‑1 (MQ=255) tCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGtt < 1:941310/146‑1 (MQ=255) cTTCCTCATTCTTCTCTCCAAATACCACCTCATGCAATATAAACATCTATATATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCAt < 2:1284147/149‑1 (MQ=255) ttCCTCCTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGAAGCTTTCCTCTATGAATCAAAATGGCCCCAAATGTTTc > 1:748128/1‑146 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc > 1:1065473/1‑146 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCAGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc > 1:403869/1‑146 (MQ=255) ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTcct > 1:408167/1‑144 (MQ=255) ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCAt > 1:1030040/1‑146 (MQ=255) tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑tttt > 2:661224/1‑149 (MQ=255) tCATTCTTCTCTCC‑AAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAACGGCCCCaaaagatgaaacatttg < 2:1163819/149‑15 (MQ=255) ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAATTGtcttgtatttattt < 2:291526/149‑14 (MQ=255) tcttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTg < 1:641783/146‑1 (MQ=255) tcttctCTCCAAAAACCACCGCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTg < 1:1271073/146‑1 (MQ=255) ctcttccgatctaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTg < 1:1607895/134‑1 (MQ=255) tctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTgggg < 1:489383/146‑1 (MQ=255) ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAACCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGaaa > 2:689046/1‑149 (MQ=255) tctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTCGGGGa > 1:820694/1‑146 (MQ=255) tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACt > 2:651474/1‑149 (MQ=255) ccAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGaaaa < 1:422176/146‑1 (MQ=255) aaaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACtgtg < 2:275507/149‑1 (MQ=255) aaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACAGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACtgt < 1:1364153/146‑1 (MQ=255) ccaccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAgtg > 2:989592/1‑149 (MQ=255) caccTCATGCAATATAAACATCTATAAATAAAGATAACAAGAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAg > 1:1455982/1‑146 (MQ=255) cTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAgtgt > 1:1651412/1‑146 (MQ=255) cATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCCAATGTTTCATC‑TTTTGGGGGACAACTGTGCAGTGTTg > 1:1286957/1‑146 (MQ=255) tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTTAAAAAGTATATCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTTTGCAGTGTTTGc > 1:353953/1‑146 (MQ=255) tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGc > 1:1335946/1‑146 (MQ=255) tataAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAAc < 2:1534226/149‑1 (MQ=255) cTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTaca < 2:556366/149‑1 (MQ=255) tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaa > 2:1623303/1‑149 (MQ=255) taaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa > 2:151966/1‑149 (MQ=255) aataacGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaa > 1:1150922/1‑146 (MQ=255) ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa > 1:927895/1‑146 (MQ=255) ataaaAATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAATTAGTACGCTATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaa < 2:499336/149‑1 (MQ=255) taaaGACAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa < 2:611545/149‑1 (MQ=255) aGAAAACGATGGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa < 1:979799/146‑1 (MQ=255) gATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAACCAAAg > 1:555903/1‑146 (MQ=255) gATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtgt > 2:629954/1‑149 (MQ=255) aaCAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCATACTCGTTTACAAAACAAAGTGTACa < 2:916741/149‑1 (MQ=255) aCAATAGAATATTAAGCCCACAAATAAACTGAAAAAGTTTGTCCGCGATGCTCTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTa < 1:1586650/146‑1 (MQ=255) aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACa < 1:78601/146‑1 (MQ=255) aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa < 2:1439266/149‑1 (MQ=255) aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa < 2:1013471/149‑1 (MQ=255) ccaaTATTAAGCCAACAAATCAACTGAAACAGTTTGTCCGCGATGCTTTCCTCTATGCGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCATGAACAAAGCAAAGTGTTCAGaa < 1:1605235/144‑1 (MQ=255) aGAATATTAAGCCAACAAATAAACTGAAATAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCACACTCGTTTACAAAACAAAGTGTACAGaa < 1:1605252/146‑1 (MQ=255) gAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGAACCAAATGTTTCATC‑TTTTGGGGGAAAACGGTGCAGTGTTGGCAGTCAAACTCGTTTACAGAACAAAGTGTACAGAACGAc > 2:1139806/1‑149 (MQ=255) atTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGcc > 2:618072/1‑149 (MQ=255) tAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGc < 1:1275998/146‑1 (MQ=255) gaggcaaacaaTAAACCGAAAAAGGTTTGCCGCCATGCCTTCCTTTATGAGTCAAAATGGCCCCAAATGTTTCCTCTTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGc < 1:387360/137‑1 (MQ=255) aaGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGcc > 1:1294653/1‑146 (MQ=255) ggCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGccc > 1:960740/2‑146 (MQ=255) ctcaaaaaATAATCTGAAAAAGTTTGTCCGCGCTGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTTTACAGAACGACTGCCCATGt < 2:504414/147‑1 (MQ=255) ccAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTc > 2:64685/1‑149 (MQ=255) caacaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAACGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATg < 1:35945/146‑1 (MQ=255) aacaaATAAACTGAAACCGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGATTCATC‑GTTTGGGGTAAAACTGTGCAGTGTTGGCAGTGAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGt > 1:464012/1‑146 (MQ=255) aacaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCACATGTCGa > 2:312195/1‑149 (MQ=255) aTAAACTGAAAAAGTTTGTCCGCGATCCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg < 2:1166724/149‑1 (MQ=255) aCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAAt > 2:268711/1‑149 (MQ=255) tGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGaaa > 1:131935/1‑146 (MQ=255) aaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa < 1:1604917/146‑1 (MQ=255) aaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt > 2:157448/1‑149 (MQ=255) aaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGCCAAGCCCTTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa < 1:187214/146‑1 (MQ=255) aaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGCGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATa < 1:187364/146‑1 (MQ=255) aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttttt < 2:1120939/149‑1 (MQ=255) aaGGTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt < 1:1042007/146‑1 (MQ=255) ggTTTGT‑CGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGGAATAGttgt > 1:607655/2‑144 (MQ=255) gTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTg < 2:638995/149‑1 (MQ=255) tGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGGCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa < 2:630713/149‑1 (MQ=255) gcccGCGATGCTTTCCTCTATGAGGCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTga < 1:272603/144‑1 (MQ=255) ccGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTCAGAAATAGTTTTTTgaaa < 1:1056277/146‑1 (MQ=255) cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGTAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaag < 1:592363/146‑1 (MQ=255) tGCTTTCCTCTATGCGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaag < 1:630018/146‑1 (MQ=255) gCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc > 1:971131/1‑146 (MQ=255) cTTTTCTCTAGGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca < 1:140135/146‑1 (MQ=255) cTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca > 1:643232/1‑146 (MQ=255) tttCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt > 2:826125/1‑149 (MQ=255) tttCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt > 2:1451445/1‑149 (MQ=255) ctATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAGACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAt > 2:792459/1‑149 (MQ=255) tacgAGTCAAAATCGCCCCAAATGTTTCCTC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt < 2:441184/146‑1 (MQ=255) tATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt > 2:440734/1‑149 (MQ=255) aGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaa < 2:125482/149‑1 (MQ=255) tCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAct > 2:1129318/1‑149 (MQ=255) aaaaTGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct > 2:1247804/1‑149 (MQ=255) aaTGGCCCCAAATGTTGCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTgg < 2:742380/149‑1 (MQ=255) gCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAAt > 2:1451469/1‑149 (MQ=255) cccAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCg > 2:872935/1‑149 (MQ=255) ccAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGACAGTTAAAACTCTGGCAAGCgt > 2:613344/1‑149 (MQ=255) cAAATGTTTCATC‑TTTTGGGGGAAAACTATGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgtt > 2:1069926/1‑149 (MQ=255) aaaTGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgttg < 2:1411464/149‑1 (MQ=255) aTGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgtt < 1:547205/146‑1 (MQ=255) aTGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCgtt < 1:595986/146‑1 (MQ=255) | ACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATC‑TTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGGCAATCGTTG > CP009273/4532667‑4532959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |