New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2850291	58 (1.290)	3 (0.070)	3/264	NT	5.5%	coding (143/462 nt)	hycA	regulator of the transcriptional regulator FhlA
	?	NC_000913	= 2850310	47 (1.090)					coding (124/462 nt)	hycA	regulator of the transcriptional regulator FhlA

AGTTGCGCCTGCGCAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCA  >  NC_000913/2850144‑2850438                                                                                                                                                    |                                                                                                                                                       aattGCGCCTGTCAATTCCGCTGGTTGTCTGCTCCATCTTTTGTTTCGACGTAAGACTTGATGTTGTGGCGGTTAAAGCCATCCGCCAGGGTGACGTAAATGCTAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCa                                                                                                                                                       <  1:188207/147‑1 (MQ=255) aGTTGCGACTGGCGAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCa                                                                                                                                                       >  2:693138/1‑149 (MQ=255)  gTTGCGCCTGCGCAATTCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑g                                                                                                                                                     <  1:662799/149‑1 (MQ=255)      cgcCTGCGCAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCa                                                                                                                                                <  2:20714/149‑1 (MQ=255)       gcCTGCGCAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCAt                                                                                                                                               <  1:768929/149‑1 (MQ=255)        ccTGCGCAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAACGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTCCTTTGTCCGGCGCGCA‑GC‑TCATg                                                                                                                                              >  2:14636/1‑149 (MQ=255)          tGCGCAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGGTCTTTGTCCGGCGCGCA‑GC‑TCATGGc                                                                                                                                            >  1:133905/1‑149 (MQ=255)              cAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGa                                                                                                                                        <  1:668447/149‑1 (MQ=255)               actCCGATGTTTGTCTGCGCCATCTTTTGTTTCGACGGACCACCAGAGTGAGGGGCTGTTAAAGCCACCCGCAAGCGTGGCGTAAATGCTAAAATGTTCAAAATGGACGACCCAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGAt                                                                                                                                       <  2:300225/147‑1 (MQ=255)               aaTCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGAt                                                                                                                                       >  1:437373/1‑149 (MQ=255)               aaTCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGAAGTAATCGCTAGAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGAt                                                                                                                                       >  1:583556/1‑149 (MQ=255)                 tCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGGTGGTAAAGCCATCCGTCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑CCATGGCGTGATGc                                                                                                                                     <  1:546813/149‑1 (MQ=255)                 tCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATga                                                                                                                                     >  1:320051/1‑148 (MQ=255)                   cGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTACATGCGAAAATGTTCTAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAg                                                                                                                                   <  2:427746/149‑1 (MQ=255)                   cGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAg                                                                                                                                   <  2:797370/149‑1 (MQ=255)                       gTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACCCGATGGTGTGGCTGTTAAGGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCAGGCGCGCA‑GC‑TCATGGCGTGATGCAGgcgc                                                                                                                               >  1:418518‑M2/1‑145 (MQ=255)                       gTTTGTCTTCGCCATCTTTTGGTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAACTGTTCAAAACGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATCACGAGCTGCAGgcgc                                                                                                                               >  2:306326‑M2/1‑145 (MQ=255)                           gtatccGCCACCTTTTGTTTCGCCGTAATACTCGATGGTGTGGCTGTCAAAGCCATCCGCCAGGCTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCATTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCtt                                                                                                                           <  2:209123/144‑1 (MQ=255)                            tCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCttt                                                                                                                          <  1:663739/149‑1 (MQ=255)                             cTTCGCCATCTTGTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCctgcatcacgccatgagctgcgcgccgga                                                                                                                           <  1:742080‑M1/149‑30 (MQ=255)                                tgCCATCTTTGGTTTCGACGTAATCCTCGATGTTGTGGCTGTTAAGGCCATCAGTCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAAAAGAGTTCTTTGTCCGGCGCGCA‑GA‑TCATGGCGTGATGCAGGCGCGCTTTCGAt                                                                                                                      <  2:440136/148‑1 (MQ=255)                                cGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGAt                                                                                                                      <  2:377881/149‑1 (MQ=255)                                         ttGTTTCGACGTAATACTCGAGGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATc                                                                                                             <  2:723367/149‑1 (MQ=255)                                            tttCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCCTGCATCACGCCATGA‑GCTGcgcgccggacaaagaactctgttt                                                                                                           >  1:475070‑M2/1‑125 (MQ=255)                                            tttCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATcccc                                                                                                          <  1:397548/149‑1 (MQ=255)                                                gACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGaa                                                                                                      <  2:566789/149‑1 (MQ=255)                                                 aCGTAATACTCGATGGTGAAGCCATTAAAGCCATACGACAGGGTGACGTAAATACGGAGATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑GCATGACGAGATGCAGGCCGGCTTTCGATGACGTGATCACCTGAAc                                                                                                     >  2:364288/1‑149 (MQ=255)                                                   gTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCa                                                                                                   <  2:618395/149‑1 (MQ=255)                                                   gTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCa                                                                                                   <  2:196308/149‑1 (MQ=255)                                                    tAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAg                                                                                                  <  2:571309/149‑1 (MQ=255)                                                     aaTACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCctgcatcacgccatgagctgcgcgccagacaaagaactctgtttcgtcctttt                                                                                                   <  1:491105‑M1/149‑54 (MQ=255)                                                        ccTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGaa                                                                                              <  2:429172/148‑1 (MQ=255)                                                        aCTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGaa                                                                                              >  1:613684/1‑149 (MQ=255)                                                          tCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAAtt                                                                                            >  2:631527/1‑149 (MQ=255)                                                           cGATGGTGTGGCTTTTAAAGCCATCCGCCAGGGTGACGTAACTGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTg                                                                                           <  2:352652/149‑1 (MQ=255)                                                            gATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTCAACCAGCGGATTGc                                                                                          >  2:721215/1‑149 (MQ=255)                                                             aTGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCa                                                                                         <  1:393168/149‑1 (MQ=255)                                                               ggTTTGGCCGTTAAAGCCATCCGCCATGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCCTGTGCTTGATAACGTGATCCCCTGACCCAGCGAATTGCAGt                                                                                       <  1:389044/149‑1 (MQ=255)                                                                     gCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGAtgt                                                                                 <  2:287919/149‑1 (MQ=255)                                                                        gTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGcc                                                                              >  2:774995/1‑149 (MQ=255)                                                                         ttAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCa                                                                             >  1:307507/1‑149 (MQ=255)                                                                            aaGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTg                                                                          <  1:185082/149‑1 (MQ=255)                                                                             aGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTgg                                                                         <  2:541485/149‑1 (MQ=255)                                                                             aGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTAAAAAAGGACGAAACAGAGTTCTTTGTCCGGGGCGCA‑GG‑TCATGGCGTGATGCAGGCGCGCTTTCGCTACCGTGGTCGCCGGAGCCGGCGAATTGCCGTGCTTGTGCCACTgg                                                                         >  2:55888/1‑149 (MQ=255)                                                                               ccATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGCCGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACtatct                                                                       <  2:329656/149‑5 (MQ=255)                                                                               ccATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACtatct                                                                       <  2:189936/149‑5 (MQ=255)                                                                                        aGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGcg                                                              >  2:629946/1‑149 (MQ=255)                                                                                         ggggGACGTAAATGCTAAAAGGTGCAAGACGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGcga                                                             <  2:269264/149‑1 (MQ=255)                                                                                           gTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGcgacg                                                           <  2:462315/149‑1 (MQ=255)                                                                                              aCGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATg                                                        <  2:133905/149‑1 (MQ=255)                                                                                                 tcaaTGCGAAAAGGTTCCAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCg                                                     <  1:168837/147‑1 (MQ=255)                                                                                                  aaaTGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGc                                                    >  1:113066/1‑149 (MQ=255)                                                                                                     tGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt                                                 >  1:51412/1‑149 (MQ=255)                                                                                                      gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                               >  1:702389/1‑149 (MQ=255)                                                                                                      gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                               >  2:770165/1‑149 (MQ=255)                                                                                                      gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                               >  1:627611/1‑149 (MQ=255)                                                                                                      gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                               >  1:135285/1‑149 (MQ=255)                                                                                                         aaaaTGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGa                                            <  1:693138/149‑1 (MQ=255)                                                                                                            aTGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGt                                         >  1:210899/1‑149 (MQ=255)                                                                                                               ttCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAAt                                      <  2:471463/149‑1 (MQ=255)                                                                                                                   aaaaGGACGAAACAGGGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGc                                  <  2:645968/149‑1 (MQ=255)                                                                                                                   aaaaGGACGAAACAGAGTTCTTTGTCTGGCGCGCA‑GC‑TCATGGCGTGATGCAGgcgcgccggacaaagaactctgtttcgtcctttttgaacattttcgcatttacgtcaccctggcggatggctttaacagccacaccatcgagtatt                                   <  1:491105‑M2/149‑97 (MQ=255)                                                                                                                    aaaGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCt                                 >  1:357180/1‑149 (MQ=255)                                                                                                                            aaaCAGAGTTCTTTGTCCGGCGCGagctcatggcgtgatgcaggcgcgccggacaaagaactctgtttcgtcctttttgaacattttcgcatttacgtcaccctggcggatggctttaacagccacaccatcgagtattacgtcgaaa                             >  1:475070‑M1/1‑25 (MQ=255)                                                                                                                                agagTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTAtt                     >  2:787694/1‑149 (MQ=255)                                                                                                                                agagTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAAACAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCAGTGGCGA‑GTAAGCGGGTTTGCCGCGTAtt                     >  2:428860/1‑149 (MQ=255)                                                                                                                                 gagTTCTTTGTCCGGCGCGCA‑GC‑TCATTGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGTACCAGCGAATTGCAGGAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATATAAGCGGCTTGCTCGCTTAttt                    >  1:154315/1‑149 (MQ=255)                                                                                                                                 gagTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTAttt                    <  2:399300/149‑1 (MQ=255)                                                                                                                                           tCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGgcgcgccggacaaagaactctgtttcgtcctttttgaacattttcgcatttacgtcaccctggcggatggctttaacagccacaccatcgagtattacgtcgaaacacaagatggcgaag           <  1:742080‑M2/149‑121 (MQ=255)                                                                                                                                                 gcgcctgcatcacgccatgagctgcgcgcctgacaaagaactctgtttcgtcctttttgaacattttcgcatttacgtcaccctggcggatggccttaacagccacaccatcgggtattacgtcgaaacaaaagatggcgaagacaaac       >  1:418518‑M1/1‑4 (MQ=255)                                                                                                                                                 gcgcctgcagctcgtgatgagctgcgcgccggacaaagaactctgtttcgtccgttttgaacagtttcgcatttacgtcaccctggcggatggctttaacagccacaccatcgagtattacgtcgaaccaaaagatggcgaagacaaac       >  2:306326‑M1/1‑4 (MQ=255)                                                                                                                                                   gcA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCa  >  1:397248/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                       AGTTGCGCCTGCGCAATCCGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCA  >  NC_000913/2850144‑2850438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.