New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 285029158 (1.290)3 (0.070) 3/264 NT 5.5% coding (143/462 nt) hycA regulator of the transcriptional regulator FhlA
?NC_000913 = 2850310 47 (1.090)coding (124/462 nt) hycA regulator of the transcriptional regulator FhlA

CGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGA  >  NC_000913/2850162‑2850456
                                                                                                                                                      |                                                                                                                                                   
cGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTACATGCGAAAATGTTCTAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAg                                                                                                                                                     <  2:427746/149‑1 (MQ=255)
cGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAg                                                                                                                                                     <  2:797370/149‑1 (MQ=255)
    gTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACCCGATGGTGTGGCTGTTAAGGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCAGGCGCGCA‑GC‑TCATGGCGTGATGCAGgcgc                                                                                                                                                 >  1:418518‑M2/1‑145 (MQ=255)
    gTTTGTCTTCGCCATCTTTTGGTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAACTGTTCAAAACGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATCACGAGCTGCAGgcgc                                                                                                                                                 >  2:306326‑M2/1‑145 (MQ=255)
        gtatccGCCACCTTTTGTTTCGCCGTAATACTCGATGGTGTGGCTGTCAAAGCCATCCGCCAGGCTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCATTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCtt                                                                                                                                             <  2:209123/144‑1 (MQ=255)
         tCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCttt                                                                                                                                            <  1:663739/149‑1 (MQ=255)
             tgCCATCTTTGGTTTCGACGTAATCCTCGATGTTGTGGCTGTTAAGGCCATCAGTCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAAAAGAGTTCTTTGTCCGGCGCGCA‑GA‑TCATGGCGTGATGCAGGCGCGCTTTCGAt                                                                                                                                        <  2:440136/148‑1 (MQ=255)
             cGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGAt                                                                                                                                        <  2:377881/149‑1 (MQ=255)
                      ttGTTTCGACGTAATACTCGAGGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATc                                                                                                                               <  2:723367/149‑1 (MQ=255)
                         tttCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCCTGCATCACGCCATGA‑GCTGcgcgccggacaaagaactctgttt                                                                                                                             >  1:475070‑M2/1‑125 (MQ=255)
                         tttCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATcccc                                                                                                                            <  1:397548/149‑1 (MQ=255)
                             gACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGaa                                                                                                                        <  2:566789/149‑1 (MQ=255)
                              aCGTAATACTCGATGGTGAAGCCATTAAAGCCATACGACAGGGTGACGTAAATACGGAGATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑GCATGACGAGATGCAGGCCGGCTTTCGATGACGTGATCACCTGAAc                                                                                                                       >  2:364288/1‑149 (MQ=255)
                                gTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCa                                                                                                                     <  2:196308/149‑1 (MQ=255)
                                gTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCa                                                                                                                     <  2:618395/149‑1 (MQ=255)
                                 tAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAg                                                                                                                    <  2:571309/149‑1 (MQ=255)
                                     ccTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGaa                                                                                                                <  2:429172/148‑1 (MQ=255)
                                     aCTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGaa                                                                                                                >  1:613684/1‑149 (MQ=255)
                                       tCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAAtt                                                                                                              >  2:631527/1‑149 (MQ=255)
                                        cGATGGTGTGGCTTTTAAAGCCATCCGCCAGGGTGACGTAACTGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTg                                                                                                             <  2:352652/149‑1 (MQ=255)
                                         gATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTCAACCAGCGGATTGc                                                                                                            >  2:721215/1‑149 (MQ=255)
                                          aTGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCa                                                                                                           <  1:393168/149‑1 (MQ=255)
                                            ggTTTGGCCGTTAAAGCCATCCGCCATGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCCTGTGCTTGATAACGTGATCCCCTGACCCAGCGAATTGCAGt                                                                                                         <  1:389044/149‑1 (MQ=255)
                                                  gCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGAtgt                                                                                                   <  2:287919/149‑1 (MQ=255)
                                                     gTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGcc                                                                                                >  2:774995/1‑149 (MQ=255)
                                                      ttAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCa                                                                                               >  1:307507/1‑149 (MQ=255)
                                                         aaGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTg                                                                                            <  1:185082/149‑1 (MQ=255)
                                                          aGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTgg                                                                                           <  2:541485/149‑1 (MQ=255)
                                                          aGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTAAAAAAGGACGAAACAGAGTTCTTTGTCCGGGGCGCA‑GG‑TCATGGCGTGATGCAGGCGCGCTTTCGCTACCGTGGTCGCCGGAGCCGGCGAATTGCCGTGCTTGTGCCACTgg                                                                                           >  2:55888/1‑149 (MQ=255)
                                                            ccATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGCCGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACtatct                                                                                         <  2:329656/149‑5 (MQ=255)
                                                            ccATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACtatct                                                                                         <  2:189936/149‑5 (MQ=255)
                                                                     aGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGcg                                                                                >  2:629946/1‑149 (MQ=255)
                                                                      ggggGACGTAAATGCTAAAAGGTGCAAGACGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGcga                                                                               <  2:269264/149‑1 (MQ=255)
                                                                        gTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGcgacg                                                                             <  2:462315/149‑1 (MQ=255)
                                                                           aCGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATg                                                                          <  2:133905/149‑1 (MQ=255)
                                                                              tcaaTGCGAAAAGGTTCCAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCg                                                                       <  1:168837/147‑1 (MQ=255)
                                                                               aaaTGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGc                                                                      >  1:113066/1‑149 (MQ=255)
                                                                                  tGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt                                                                   >  1:51412/1‑149 (MQ=255)
                                                                                   gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                                                 >  1:702389/1‑149 (MQ=255)
                                                                                   gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                                                 >  1:135285/1‑149 (MQ=255)
                                                                                   gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                                                 >  1:627611/1‑149 (MQ=255)
                                                                                   gCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCtgt‑g                                                                 >  2:770165/1‑149 (MQ=255)
                                                                                      aaaaTGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGa                                                              <  1:693138/149‑1 (MQ=255)
                                                                                         aTGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGt                                                           >  1:210899/1‑149 (MQ=255)
                                                                                            ttCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAAt                                                        <  2:471463/149‑1 (MQ=255)
                                                                                                aaaaGGACGAAACAGGGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGc                                                    <  2:645968/149‑1 (MQ=255)
                                                                                                aaaaGGACGAAACAGAGTTCTTTGTCTGGCGCGCA‑GC‑TCATGGCGTGATGCAGgcgcgccggacaaagaactctgtttcgtcctttttgaacattttcgcatttacgtcaccctggcggatggctttaacagccacaccatcgagtatt                                                     <  1:491105‑M2/149‑97 (MQ=255)
                                                                                                 aaaGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCt                                                   >  1:357180/1‑149 (MQ=255)
                                                                                                             agagTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTAtt                                       >  2:787694/1‑149 (MQ=255)
                                                                                                             agagTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAAACAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCAGTGGCGA‑GTAAGCGGGTTTGCCGCGTAtt                                       >  2:428860/1‑149 (MQ=255)
                                                                                                              gagTTCTTTGTCCGGCGCGCA‑GC‑TCATTGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGTACCAGCGAATTGCAGGAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATATAAGCGGCTTGCTCGCTTAttt                                      >  1:154315/1‑149 (MQ=255)
                                                                                                              gagTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTAttt                                      <  2:399300/149‑1 (MQ=255)
                                                                                                                        tCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGgcgcgccggacaaagaactctgtttcgtcctttttgaacattttcgcatttacgtcaccctggcggatggctttaacagccacaccatcgagtattacgtcgaaacacaagatggcgaag                             <  1:742080‑M2/149‑121 (MQ=255)
                                                                                                                                gcA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCa                    >  1:397248/1‑149 (MQ=255)
                                                                                                                                              gTGATGCAGGCGCGCTTTCGATAACGTGAGCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGttt        <  1:178823/149‑1 (MQ=255)
                                                                                                                                               tGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTa       >  1:759021/1‑149 (MQ=255)
                                                                                                                                                  tGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACAAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCGTTGTCCGGTTACCCGTTTAACa    >  2:205277/1‑149 (MQ=255)
                                                                                                                                                  tGCAGGCGCCCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACa    <  1:430302/149‑1 (MQ=255)
                                                                                                                                                    cAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTCCCCGTTTAACaga  <  2:613684/149‑1 (MQ=255)
                                                                                                                                                    cAGGCGCGCTTTCGAGAAGGTGATCCCCGGAACCAGCGAATTGCAGTAGCTGCGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACaga  <  2:302718/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
CGCTGTTTGTCTTCGCCATCTTTTGTTTCGACGTAATACTCGATGGTGTGGCTGTTAAAGCCATCCGCCAGGGTGACGTAAATGCGAAAATGTTCAAAAAGGACGAAACAGAGTTCTTTGTCCGGCGCGCA‑GC‑TCATGGCGTGATGCAGGCGCGCTTTCGATAACGTGATCCCCTGAACCAGCGAATTGCAGTAGATGTGCCACTGGTCCTGTAGGCGACGATGCCGCTGT‑GCGATGTAATCGGCTTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGA  >  NC_000913/2850162‑2850456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.