BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3917666 =	108 (1.310)	3 (0.040)	3/270	NT	2.7%	coding (599/864 nt)	atpG	F1 sector of membrane‑bound ATP synthase, gamma subunit
*	?	NC_000913	3917721 =	112 (1.390)	3 (0.040)	3/270	NT	2.7%	coding (544/864 nt)	atpG	F1 sector of membrane‑bound ATP synthase, gamma subunit
Rejected: Frequency below/above cutoff threshold.

Only 100 of 123 total aligned reads displayed.

TTTCATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCACTTTTACCGGAC  >  NC_000913/3917521‑3917813

tttCATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGCTTCGACATAACGACGCAGCCGGGTGTCCAGCAACGCCTTCGGAGCGGGTTCGT‑GCCGGTAATCCCCGGATTTATGTTTcc                                                                                                                                                  >  2:531783/1‑148 (MQ=255)

tttCATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGtttag                                                                                                                                                  >  1:116744/1‑147 (MQ=255)

tttCATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCa                                                                                                                                                  <  2:922357/149‑1 (MQ=255)

tttCATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCa                                                                                                                                                  >  2:1443905/1‑149 (MQ=255)

   cATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCGGat                                                                                                                                               >  2:704382/1‑149 (MQ=255)

    aTCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatc                                                                                                                                              <  1:1151620/149‑1 (MQ=255)

    aTCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatc                                                                                                                                              >  1:286712/1‑149 (MQ=255)

     tCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatca                                                                                                                                             >  1:239824/1‑149 (MQ=255)

     tCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTAAACCACGCCCGGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGTATTTATGTTTCAGatca                                                                                                                                             <  2:728654/149‑1 (MQ=255)

       gCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatc                                                                                                                                           <  2:712145/149‑1 (MQ=255)

       gCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatc                                                                                                                                           <  1:157673/149‑1 (MQ=255)

        ccaccaTACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTAAGgtcatca                                                                                                                                          >  2:1188561/1‑149 (MQ=255)

         caccaTACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatcat                                                                                                                                         >  1:501997/1‑149 (MQ=255)

          accaTACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatcatc                                                                                                                                        <  2:215643/149‑1 (MQ=255)

          accaTACGGGCGCCCGGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatcatc                                                                                                                                        <  1:306489/149‑1 (MQ=255)

           ccaTACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatcatca                                                                                                                                       <  1:103339/149‑1 (MQ=255)

            caTACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCGGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGatcatcgacat                                                                                                                                      >  1:1254627/1‑144 (MQ=255)

                cGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGa                                                                                                                                  <  2:270196/149‑1 (MQ=255)

                  ggcggcCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATg                                                                                                                                <  1:545707/149‑1 (MQ=255)

                     ggcCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCg                                                                                                                             <  1:280860/149‑1 (MQ=255)

                     gcccTGCTCGCTGGCCAGGGTTTCAACCACGCCCCGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCg                                                                                                                             <  2:1355491/147‑1 (MQ=255)

                      gcCTGCTCGCTTGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAAGCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCgg                                                                                                                            <  1:337528/149‑1 (MQ=255)

                      gcCTGCTCGCTGGCCAGGTTTTCAACCCCGCCCTGATAAACCTGAGATTCGACGTAACGACGCCGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCgg                                                                                                                            <  2:630881/149‑1 (MQ=255)

                         tGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGAGTTATGTTTCAGATCATCATCATCTGATGCCGGTaa                                                                                                                         <  2:314824/149‑1 (MQ=255)

                          gctcgctcGCCAGGTTCTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACCGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAAc                                                                                                                        <  2:1328409/149‑1 (MQ=255)

                              gCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCACATGATGCCGGTAACGgca                                                                                                                    >  2:830011/1‑149 (MQ=255)

                                tGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGACTTATGTTTCAGATCGTCATCATCTGCTGCCGTTACCGgcctc                                                                                                                  <  2:1251933/149‑4 (MQ=255)

                                    cAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATGCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCagaagca                                                                                                              >  2:1295648/1‑148 (MQ=255)

                                     aGGTTTTCGACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCTGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGGTTCAGATCGTCATCATCTGCTGCCGGGAACGgcaacggcag                                                                                                             >  2:1182278/1‑142 (MQ=255)

                                        ttttCAACCACGCCCCGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAgctggct                                                                                                          >  2:1250910/1‑149 (MQ=255)

                                           tCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTGTGTTTCGGATCATCATCATCTGATGCCGGCAACGGCGGCAgctggctggt                                                                                                       >  2:4960/1‑147 (MQ=255)

                                              aCCACGCCCTGATAAACCTGAGATTCGACATAACGACGAAGCAGGGTATCCAGCAACGCCTTCGGGTCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGt                                                                                                    >  1:347920/1‑149 (MQ=255)

                                               tgatcggtccggcaaaagtgatgttgcaggcctacgacgaaggccgtctggacaagctttacattgtcagcaacaaatttattaacaccatgtctcaggTTCCGACCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGt                                                                                                    >  2:823090‑M1/100‑149 (MQ=255)

                                                 aCGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCgg                                                                                                 <  2:1116744/149‑1 (MQ=255)

                                                     ccTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGTTGGTCgtagac                                                                                             >  2:1082358/1‑144 (MQ=255)

                                                      cTGATAAACCTGAGATCCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCt                                                                                            <  1:105393/149‑1 (MQ=255)

                                                       tGATAAACCTGAGATTAGACATAACGACGCAGCAGGGTATCGGTCAACGCCTTAGGAT‑GGAAACGTAAAAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTg                                                                                           >  2:1029221/1‑149 (MQ=255)

                                                        gATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTga                                                                                          <  2:1357072/149‑1 (MQ=255)

                                                              ccTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACCGGTAATCCCAGGATTTATGTTTCAGATTATCATCATCTGATGCCGGTAACGGCAGCAGCGGGCTGATGGTCGGAACCTGAGACagg                                                                                    >  2:446866/1‑147 (MQ=255)

                                                              ccTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGGAGGAACCTGAGACATg                                                                                    >  2:61964/1‑149 (MQ=255)

                                                               cTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATgg                                                                                   >  2:1362394/1‑149 (MQ=255)

                                                                tGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGgt                                                                                  <  2:481178/149‑1 (MQ=255)

                                                                  agaTTCGACATAACGGCGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACTTGAGACATGgtgt                                                                                <  1:997095/149‑1 (MQ=255)

                                                                  agaTTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGgtgt                                                                                >  2:1068979/1‑149 (MQ=255)

                                                                  agaTTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGgtgt                                                                                <  1:1388329/149‑1 (MQ=255)

                                                                    aTTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTGATCCCAGGATTTATGTTTCAGATCATCATCCTCTGATGCCGGTGACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGGGTta                                                                              >  1:1202135/1‑149 (MQ=255)

                                                                    aTTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATACTCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTta                                                                              <  2:312200/149‑1 (MQ=255)

                                                                     ttCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTtaa                                                                             >  1:1227189/1‑149 (MQ=255)

                                                                     gtCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTtaa                                                                             <  2:798604/148‑1 (MQ=255)

                                                                      tCGACATAACGACGCAGCACGGTATCCAGCAACGCCTTCGGAACGCGGTNGT‑ACACGTAAGGCCAGGACGTCTGTTTCAAATCATCATCATCTGAGGCCGGTAACGGCGGCGNCTGGGTCATGGGCGGCACCTAAGACATGgngtaagg                                                                            >  2:795306/1‑145 (MQ=255)

                                                                       cGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCNGNANCTGNGACAGGGGGTtaata                                                                           >  1:975227/1‑149 (MQ=255)

                                                                        gACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGAAGGCTGGGACGTCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTtaataa                                                                          >  1:638616/1‑149 (MQ=255)

                                                                        gACATAACGACGCAGCAGGGGATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTtaataa                                                                          <  1:244722/149‑1 (MQ=255)

                                                                         aCATAACGACGCAGCAGCGTATCCAGCATGGCCTTCGGATCGGGTGCGT‑ACAGGTAACCACAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGATCCTGTGTCATCGTGTTAATaaa                                                                         <  2:1150626/149‑1 (MQ=255)

                                                                         aCATAACCACCCAGCAGGCTATCCCGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCGCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATaaa                                                                         <  2:866381/149‑1 (MQ=255)

                                                                            tAACGTCGCTGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGCAACCCCAGCATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAGCCTGAGACATGGTGTTAATAAAttt                                                                      <  1:867720/149‑1 (MQ=255)

                                                                            tAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAAttt                                                                      <  1:1403937/149‑1 (MQ=255)

                                                                            tAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATATGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAAttt                                                                      >  2:534282/1‑149 (MQ=255)

                                                                            tAACGACGCAGCAGGGTATCCAGCAACGCCCTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAAttt                                                                      <  1:1209151/149‑1 (MQ=255)

                                                                               tacgacgaaggccgtctggacaagctttacattgtcagcaacaaatttattaacaccatgtcccaggTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATttgt                                                                    <  2:380130‑M1/82‑1 (MQ=255)

                                                                                gacgCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATttgttg                                                                  <  1:26773/149‑1 (MQ=255)

                                                                                   gcagcaGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCGTCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTg                                                               >  1:1147764/1‑149 (MQ=255)

                                                                                    cagcagGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGa                                                              >  2:189808/1‑149 (MQ=255)

                                                                                     agcagGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGAc                                                             >  1:836935/1‑149 (MQ=255)

                                                                                     agcagGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGAc                                                             >  1:1264319/1‑149 (MQ=255)

                                                                                      gcagGGTAGCCAGCAACGCCGTCGGAGCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACa                                                            <  2:230064/149‑1 (MQ=255)

                                                                                       cagGGTATCCAGCAACGCCTGCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACGTGAGACATGGTGTTAATAAATTTGTTGCTGACaa                                                           <  1:1188561/149‑1 (MQ=255)

                                                                                         gggTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATCAATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCCGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATg                                                         >  1:1371438/1‑149 (MQ=255)

                                                                                           cgtctggacaagctttacattgtcagcaacaaatttattaacaccatgtcccaggTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGt                                                        >  1:380130‑M1/56‑149 (MQ=255)

                                                                                              tCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAg                                                    <  2:501997/149‑1 (MQ=255)

                                                                                              tCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAg                                                    <  1:1313424/149‑1 (MQ=255)

                                                                                                cAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCt                                                  >  2:162196/1‑149 (MQ=255)

                                                                                                  gCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTg                                                >  1:566744/1‑149 (MQ=255)

                                                                                                     aCGCCTTCGGATCGGGTTCGT‑ACAGGCAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTcc                                             <  2:153663/149‑1 (MQ=255)

                                                                                                       gCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCCGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAGCTTTGTTGCTTACAATGTGGAGCGTATCCAg                                           >  1:332035/1‑149 (MQ=255)

                                                                                                       gCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAg                                           >  2:279806/1‑149 (MQ=255)

                                                                                                        ccTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGa                                          <  1:1031304/149‑1 (MQ=255)

                                                                                                         cTTCGGATCGGGTTCGT‑ACAGGTAATCCCGGGATTTATGTTTCAGATCATCATCATCTGATGCAGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAGAGCTTGTCCAGAc                                         >  1:948316/1‑149 (MQ=255)

                                                                                                         cTTCGGATCGGGTTCGT‑ACAGGTAAACCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGAc                                         >  1:869486/1‑149 (MQ=255)

                                                                                                                 cGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTtcg                                 <  1:1250910/149‑1 (MQ=255)

                                                                                                                 cGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTtcg                                 <  1:384036/149‑1 (MQ=255)

                                                                                                                  gggTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTtcgt                                <  1:872379/149‑1 (MQ=255)

                                                                                                                    gTTCGT‑ACAGGTAATCCCAGGTTTTATGTTTTAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTTTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTtcgtcg                              <  1:998567/149‑1 (MQ=255)

                                                                                                                    gTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTtcgtcg                              >  1:1345131/1‑149 (MQ=255)

                                                                                                                      tCGT‑ACAAGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTa                            <  2:723029/149‑1 (MQ=255)

                                                                                                                       cGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAg                           <  1:1362394/149‑1 (MQ=255)

                                                                                                                        gT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAgg                          >  2:781008/1‑149 (MQ=255)

                                                                                                                         t‑ACAGGTAATCCCAGGATTTATGTTTCAGATCCTCATCATCTGATGCCGGTAACGGCAGCCGCCTGCTGCTGTTCCGCACCTTCGACATGCTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGc                         <  1:704382/149‑1 (MQ=255)

                                                                                                                               gTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGCCAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGcccgaa                    >  2:718692/1‑145 (MQ=255)

                                                                                                                                tAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCaa                   <  1:1443582/149‑1 (MQ=255)

                                                                                                                                     ccAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCa              >  1:175222/1‑149 (MQ=255)

                                                                                                                                      cAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCAc             <  2:1052544/149‑1 (MQ=255)

                                                                                                                                            ttATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCACTTTTAc       <  2:1227189/149‑1 (MQ=255)

                                                                                                                                            ttATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCGGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCACTTTTAc       <  2:1055472/149‑1 (MQ=255)

                                                                                                                                               tGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTCCAACATCACTTTTACCgg    >  2:170520/1‑149 (MQ=255)

                                                                                                                                                gTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCCCTTTTACCGGa   >  2:247883/1‑149 (MQ=255)

                                                                                                                                                gTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCACTTTTACCGGa   <  2:1381693/149‑1 (MQ=255)

                                                                                                                                                 tttCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCACTGTTACCCGAc  >  2:891538/1‑149 (MQ=255)

                                                                                                                                                 tttCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGACAACGACCTGCAAGAGCACATTTACCGGAc  >  1:331874/1‑149 (MQ=255)

                                                                                                                                                 tttCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGACTTCGTCGTAGGCCTGCAACATCACTTTTACCGGAc  >  2:1126289/1‑149 (MQ=255)

TTTCATCGCCACCATACGGGCGGCCTGCTCGCTGGCCAGGTTTTCAACCACGCCCTGATAAACCTGAGATTCGACATAACGACGCAGCAGGGTATCCAGCAACGCCTTCGGATCGGGTTCGT‑ACAGGTAATCCCAGGATTTATGTTTCAGATCATCATCATCTGATGCCGGTAACGGCAGCAGCTGGCTGATGGTCGGAACCTGAGACATGGTGTTAATAAATTTGTTGCTGACAATGTAAAGCTTGTCCAGACGGCCTTCGTCGTAGGCCTGCAACATCACTTTTACCGGAC  >  NC_000913/3917521‑3917813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.