BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1100121 =	96 (0.970)	6 (0.060)	6/256	NT	6.3%	coding (482/555 nt)	ycdY	redox enzyme maturation protein (REMP) chaperone for YcdX
*	?	NC_000913	1100158 =	85 (0.890)	6 (0.060)	6/256	NT	6.3%	coding (519/555 nt)	ycdY	redox enzyme maturation protein (REMP) chaperone for YcdX

Only 100 of 108 total aligned reads displayed.

CATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGG  >  NC_000913/1099974‑1100269

tatgttcatgccgcgcatgatagcagaaaacgcggccatgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGc                                                                                                                                                      <  3:276778‑M1/2‑1 (MQ=255)

tatgttcatgccgcgcatgatagcagaaaacgcggccatgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGc                                                                                                                                                      <  1:304229‑M1/2‑1 (MQ=255)

     ctgctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑t                                                                                                                                                >  4:32585/1‑149 (MQ=255)

          cGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCAc                                                                                                                                           >  1:606689/1‑149 (MQ=255)

            cAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCg                                                                                                                                         >  4:725690/1‑149 (MQ=255)

             aGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGc                                                                                                                                        >  2:453616/1‑149 (MQ=255)

                ttCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTaa                                                                                                                                     >  2:28874/1‑149 (MQ=255)

                ttCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTaa                                                                                                                                     >  4:414646/1‑149 (MQ=255)

                ttCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTaa                                                                                                                                     >  1:50818/1‑149 (MQ=255)

                   ctggctggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAAccc                                                                                                                                  >  2:392063/1‑149 (MQ=255)

                       ctggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGa                                                                                                                              <  3:143623/149‑1 (MQ=255)

                        tggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGAt                                                                                                                             >  1:19202/1‑149 (MQ=255)

                        tggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGAt                                                                                                                             >  3:457980/1‑149 (MQ=255)

                         ggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATg                                                                                                                            >  3:856612/1‑149 (MQ=255)

                         gaaaacgcggccatgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCa                                                                                                                                                     <  3:806846‑M1/3‑1 (MQ=255)

                         gaaaacgcggccatgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCa                                                                                                                                                     >  4:806846‑M1/123‑125 (MQ=255)

                           aaacgcggccatgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGc                                                                                                                           >  4:276778‑M1/121‑149 (MQ=255)

                           aaGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGCGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGcc                                                                                                                          >  2:676089/1‑149 (MQ=255)

                              aTCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCAtt                                                                                                                       >  2:880337/1‑149 (MQ=255)

                                 aGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGt                                                                                                                    <  2:147836/149‑1 (MQ=255)

                                  gTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTg                                                                                                                   >  1:642243/1‑149 (MQ=255)

                                    catgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCa                                                                                                                 <  2:487639‑M1/38‑1 (MQ=255)

                                     atgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCaa                                                                                                                >  4:776907‑M1/111‑149 (MQ=255)

                                      tgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAt                                                                                                               >  1:487639‑M1/110‑149 (MQ=255)

                                      aCGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAt                                                                                                               <  1:61307/149‑1 (MQ=255)

                                        ggAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtgt                                                                                                             >  2:842515/1‑149 (MQ=255)

                                        ggAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtgt                                                                                                             >  2:668461/1‑149 (MQ=255)

                                          aaGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTgg                                                                                                           <  2:146955/149‑1 (MQ=255)

                                             gatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGa                                                                                                         >  3:722625‑M1/103‑149 (MQ=255)

                                                agagCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCTTGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAg                                                                                                     <  3:132311/149‑1 (MQ=255)

                                                 gagcataGCAATGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAATGTGGAGTCCCAGGCAACCACGCCTTTCTGGCGCACCG‑TGGCACCGCTAACCCGCGATACCATTAGTGCAATGTGGAACGAGc                                                                                                    >  4:43461/7‑149 (MQ=255)

                                                  agCGAAGCACTGGAGACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCt                                                                                                   <  2:470868/149‑1 (MQ=255)

                                                  agCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCt                                                                                                   <  3:718076/149‑1 (MQ=255)

                                                    cGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg                                                                                                 <  1:475868/149‑1 (MQ=255)

                                                      aaGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaa                                                                                               <  3:732411/149‑1 (MQ=255)

                                                      aaGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaa                                                                                               >  2:304229/1‑149 (MQ=255)

                                                       aGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGt                                                                                                                    >  1:549892/1‑127 (MQ=255)

                                                        gCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGa                                                                                                         <  1:115923/137‑1 (MQ=255)

                                                        gCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGa                                                                                                         >  2:115923/1‑137 (MQ=255)

                                                        gCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaaga                                                                                             <  1:640006/149‑1 (MQ=255)

                                                          aCTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGaagaag                                                                                           <  1:894877/149‑1 (MQ=255)

                                                          aCTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGaagaag                                                                                           <  4:115857/149‑1 (MQ=255)

                                                             ggAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGAtt                                                                                        >  3:579101/1‑149 (MQ=255)

                                                                aaCACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTg                                                                                     >  1:230055/1‑149 (MQ=255)

                                                                aaCACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTg                                                                                     >  1:376311/1‑149 (MQ=255)

                                                                 acacTGTTCAGTGAGTATCTCTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga                                                                                    <  3:725690/149‑1 (MQ=255)

                                                                  cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGGACCA‑TGGCACCGCTAACCCGCGATGCCCTTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                   <  3:548511/149‑1 (MQ=255)

                                                                  cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                   <  1:24843/149‑1 (MQ=255)

                                                                  cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                   <  2:50818/149‑1 (MQ=255)

                                                                  cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                   <  3:138622/149‑1 (MQ=255)

                                                                        tCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATaa                                                                             <  4:457980/149‑1 (MQ=255)

                                                                           gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGc                                                                                                    >  1:181511/1‑123 (MQ=255)

                                                                           gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAgtg                                                                          >  1:575676/1‑149 (MQ=255)

                                                                              aGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGa                                                                       <  2:139563/149‑1 (MQ=255)

                                                                               gTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg                                                                                                 <  4:195471/122‑1 (MQ=255)

                                                                               gTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg                                                                                                 >  3:195471/1‑122 (MQ=255)

                                                                                tATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATc                                                                     >  4:146798/1‑149 (MQ=255)

                                                                                tATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATc                                                                     <  2:606689/149‑1 (MQ=255)

                                                                                    tGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACg                                                                 >  1:107539/1‑149 (MQ=255)

                                                                                         cccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACt                                                            >  2:282152/1‑149 (MQ=255)

                                                                                          ccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTc                                                           >  1:458324/1‑149 (MQ=255)

                                                                                          ccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTc                                                           >  4:604762/1‑149 (MQ=255)

                                                                                                 tggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTg                                                    >  1:729823/1‑149 (MQ=255)

                                                                                                    tgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCaa                                                 <  2:10244/149‑1 (MQ=255)

                                                                                                    tgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTATCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCaa                                                 >  4:508899/1‑149 (MQ=255)

                                                                                                       gTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCaa                                                                                                                >  1:524594/1‑83 (MQ=255)

                                                                                                       gTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCaa                                                                                                                <  2:524594/83‑1 (MQ=255)

                                                                                                        ttCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGa                                             <  1:650974/149‑1 (MQ=255)

                                                                                                          ccTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATa                                           <  4:533849/149‑1 (MQ=255)

                                                                                                           cTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATaa                                          >  2:683700/1‑149 (MQ=255)

                                                                                                            ttGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGCGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAt                                         >  4:172540/1‑149 (MQ=255)

                                                                                                            ttGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAt                                         >  2:349887/1‑149 (MQ=255)

                                                                                                               gCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttg                                      >  1:577664/1‑149 (MQ=255)

                                                                                                                cAAAGTGGAGACCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgt                                     <  3:623708/149‑1 (MQ=255)

                                                                                                                 aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGTACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt                                    <  2:715115/149‑1 (MQ=255)

                                                                                                                 aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt                                    >  4:843186/1‑149 (MQ=255)

                                                                                                                 aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt                                    <  3:471368/149‑1 (MQ=255)

                                                                                                                  aaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttg                                   >  2:577956/1‑149 (MQ=255)

                                                                                                                   aGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgt                                  <  1:171112/149‑1 (MQ=255)

                                                                                                                    gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                 <  3:843186/149‑1 (MQ=255)

                                                                                                                    gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                 <  1:453616/149‑1 (MQ=255)

                                                                                                                    gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                 <  3:3832/149‑1 (MQ=255)

                                                                                                                    gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                 <  2:672544/149‑1 (MQ=255)

                                                                                                                    gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                 <  2:426395/149‑1 (MQ=255)

                                                                                                                       gAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCa                              >  1:699327/1‑149 (MQ=255)

                                                                                                                          gCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATaa                           >  1:363912/1‑149 (MQ=255)

                                                                                                                            ccATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATaaaa                         >  1:76292/1‑149 (MQ=255)

                                                                                                                             cATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAAt                        <  3:414646/149‑1 (MQ=255)

                                                                                                                              aTGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAAtg                       >  1:259713/1‑149 (MQ=255)

                                                                                                                                 cAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAAtgtgt                    <  1:398565/149‑1 (MQ=255)

                                                                                                                                   aCCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGc                  <  3:45129/149‑1 (MQ=255)

                                                                                                                                    ccACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCt                 >  2:408491/1‑149 (MQ=255)

                                                                                                                                      aCGCCTTTCTGGCTCACCA‑TGGCACCGCTAACCCGCGATGTCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCg               >  4:524725/1‑149 (MQ=255)

                                                                                                                                         ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc            >  2:551707/1‑149 (MQ=255)

                                                                                                                                         ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc            <  3:40221/149‑1 (MQ=255)

                                                                                                                                         ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc            <  1:303517/149‑1 (MQ=255)

                                                                                                                                           tttCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtctc          >  1:670452/1‑149 (MQ=255)

                                                                                                                                            ttCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATGAGTGCAATGGGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATATAATGTGTGCTCGATCtca         <  4:69799/149‑1 (MQ=255)

                                                                                                                                                 gcgcACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCAGTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCtcattcat    <  1:507890/149‑1 (MQ=255)

                                                                                                                                                   GCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATgg  >  3:604762‑M1/1‑149 (MQ=255)

CATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGG  >  NC_000913/1099974‑1100269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.