BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1100121 =	96 (0.970)	6 (0.060)	6/256	NT	6.3%	coding (482/555 nt)	ycdY	redox enzyme maturation protein (REMP) chaperone for YcdX
*	?	NC_000913	1100158 =	85 (0.890)	6 (0.060)	6/256	NT	6.3%	coding (519/555 nt)	ycdY	redox enzyme maturation protein (REMP) chaperone for YcdX

Only 100 of 109 total aligned reads displayed.

CAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACT  >  NC_000913/1100010‑1100306

catgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCa                                                                                                                                                      <  2:487639‑M1/38‑1 (MQ=255)

 atgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCaa                                                                                                                                                     >  4:776907‑M1/111‑149 (MQ=255)

  tgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAt                                                                                                                                                    >  1:487639‑M1/110‑149 (MQ=255)

    ggAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtgt                                                                                                                                                  >  2:842515/1‑149 (MQ=255)

    ggAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtgt                                                                                                                                                  >  2:668461/1‑149 (MQ=255)

     gAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtgtg                                                                                                                                                 <  3:161766/149‑1 (MQ=255)

         gatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGa                                                                                                                                              >  3:722625‑M1/103‑149 (MQ=255)

            agagCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCTTGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAg                                                                                                                                          <  3:132311/149‑1 (MQ=255)

             gagcataGCAATGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAATGTGGAGTCCCAGGCAACCACGCCTTTCTGGCGCACCG‑TGGCACCGCTAACCCGCGATACCATTAGTGCAATGTGGAACGAGc                                                                                                                                         >  4:43461/7‑149 (MQ=255)

              agCGAAGCACTGGAGACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCt                                                                                                                                        <  2:470868/149‑1 (MQ=255)

              agCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCt                                                                                                                                        <  3:718076/149‑1 (MQ=255)

                cGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg                                                                                                                                      <  1:475868/149‑1 (MQ=255)

                  aaGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaa                                                                                                                                    >  2:304229/1‑149 (MQ=255)

                    gCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGa                                                                                                                                              <  1:115923/137‑1 (MQ=255)

                    gCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGa                                                                                                                                              >  2:115923/1‑137 (MQ=255)

                    gCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaaga                                                                                                                                  <  1:640006/149‑1 (MQ=255)

                      aCTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGaagaag                                                                                                                                <  4:115857/149‑1 (MQ=255)

                      aCTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGaagaag                                                                                                                                <  1:894877/149‑1 (MQ=255)

                         ggAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGAtt                                                                                                                             >  3:579101/1‑149 (MQ=255)

                            aaCACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTg                                                                                                                          >  1:376311/1‑149 (MQ=255)

                            aaCACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTg                                                                                                                          >  1:230055/1‑149 (MQ=255)

                             acacTGTTCAGTGAGTATCTCTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga                                                                                                                         <  3:725690/149‑1 (MQ=255)

                              cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGGACCA‑TGGCACCGCTAACCCGCGATGCCCTTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                                                        <  3:548511/149‑1 (MQ=255)

                              cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                                                        <  1:24843/149‑1 (MQ=255)

                              cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                                                        <  2:50818/149‑1 (MQ=255)

                              cacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTgaa                                                                                                                        <  3:138622/149‑1 (MQ=255)

                                       gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGc                                                                                                                                         >  1:181511/1‑123 (MQ=255)

                                       gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGc                                                                                                                                         <  2:181511/123‑1 (MQ=255)

                                       gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAgtg                                                                                                               >  1:575676/1‑149 (MQ=255)

                                          aGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGa                                                                                                            <  2:139563/149‑1 (MQ=255)

                                           gTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg                                                                                                                                      >  3:195471/1‑122 (MQ=255)

                                           gTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg                                                                                                                                      <  4:195471/122‑1 (MQ=255)

                                            tATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATc                                                                                                          <  2:606689/149‑1 (MQ=255)

                                            tATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATc                                                                                                          >  4:146798/1‑149 (MQ=255)

                                                tGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACg                                                                                                      >  1:107539/1‑149 (MQ=255)

                                                     cccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACt                                                                                                 >  2:282152/1‑149 (MQ=255)

                                                      ccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTc                                                                                                >  1:458324/1‑149 (MQ=255)

                                                      ccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTc                                                                                                >  1:426395/1‑149 (MQ=255)

                                                      ccTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTc                                                                                                >  4:604762/1‑149 (MQ=255)

                                                             tggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTg                                                                                         >  1:729823/1‑149 (MQ=255)

                                                                tgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCaa                                                                                      <  2:10244/149‑1 (MQ=255)

                                                                tgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTATCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCaa                                                                                      >  4:508899/1‑149 (MQ=255)

                                                                   gTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCaa                                                                                                                                                     >  1:524594/1‑83 (MQ=255)

                                                                   gTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCaa                                                                                                                                                     <  2:524594/83‑1 (MQ=255)

                                                                    ttCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGa                                                                                  <  1:650974/149‑1 (MQ=255)

                                                                      ccTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATa                                                                                <  4:533849/149‑1 (MQ=255)

                                                                       cTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATaa                                                                               >  2:683700/1‑149 (MQ=255)

                                                                        ttGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGCGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAt                                                                              >  4:172540/1‑149 (MQ=255)

                                                                        ttGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAt                                                                              >  2:349887/1‑149 (MQ=255)

                                                                        ttGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAt                                                                              >  4:3832/1‑149 (MQ=255)

                                                                           gCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttg                                                                           >  1:577664/1‑149 (MQ=255)

                                                                            cAAAGTGGAGACCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgt                                                                          <  3:623708/149‑1 (MQ=255)

                                                                             aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGTACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt                                                                         <  2:715115/149‑1 (MQ=255)

                                                                             aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt                                                                         >  4:843186/1‑149 (MQ=255)

                                                                             aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt                                                                         <  3:471368/149‑1 (MQ=255)

                                                                              aaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttg                                                                        >  2:577956/1‑149 (MQ=255)

                                                                               aGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgt                                                                       <  1:171112/149‑1 (MQ=255)

                                                                                gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                                                      <  3:3832/149‑1 (MQ=255)

                                                                                gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                                                      <  3:843186/149‑1 (MQ=255)

                                                                                gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                                                      <  1:453616/149‑1 (MQ=255)

                                                                                gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                                                      <  2:672544/149‑1 (MQ=255)

                                                                                gTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgtt                                                                      <  2:426395/149‑1 (MQ=255)

                                                                                   gAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCa                                                                   >  1:699327/1‑149 (MQ=255)

                                                                                      gCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATaa                                                                >  1:363912/1‑149 (MQ=255)

                                                                                        ccATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATaaaa                                                              >  1:76292/1‑149 (MQ=255)

                                                                                          aTGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAAtg                                                            >  1:259713/1‑149 (MQ=255)

                                                                                               aCCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGc                                                       <  3:45129/149‑1 (MQ=255)

                                                                                                ccACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCt                                                      >  2:408491/1‑149 (MQ=255)

                                                                                                  aCGCCTTTCTGGCTCACCA‑TGGCACCGCTAACCCGCGATGTCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCg                                                    >  4:524725/1‑149 (MQ=255)

                                                                                                     ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc                                                 <  1:303517/149‑1 (MQ=255)

                                                                                                     ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc                                                 <  3:40221/149‑1 (MQ=255)

                                                                                                     ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc                                                 >  2:551707/1‑149 (MQ=255)

                                                                                                      tcccacattgcactaatggcatcgcgggttagcggtgccattagtgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtc                                                 >  3:722625‑M2/48‑149 (MQ=255)

                                                                                                       tttCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGAtctc                                               >  1:670452/1‑149 (MQ=255)

                                                                                                        ttCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATGAGTGCAATGGGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATATAATGTGTGCTCGATCtca                                              <  4:69799/149‑1 (MQ=255)

                                                                                                             gcgcACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCAGTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCtcattcat                                         <  1:507890/149‑1 (MQ=255)

                                                                                                             attgcactaatggcatcgcgggttagcggtgccatggtgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCtcattca                                          >  1:487639‑M2/41‑149 (MQ=255)

                                                                                                              ttgcactaatggcatcgcgggttagcggtgccatggtgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCtcattcat                                         >  4:776907‑M2/40‑149 (MQ=255)

                                                                                                               GCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATgg                                       >  3:604762‑M1/1‑149 (MQ=255)

                                                                                                                   cA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCcgc                                   <  2:76292/149‑1 (MQ=255)

                                                                                                                        gcatcgcgggttagcggtgccattagtgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGttt                               >  4:276778‑M2/30‑149 (MQ=255)

                                                                                                                          aCCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTc                             >  4:419400/1‑149 (MQ=255)

                                                                                                                           ccGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCt                            <  2:699327/149‑1 (MQ=255)

                                                                                                                            cgcgggttagcggtgccgttagtgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTg                           >  3:659618‑M2/26‑149 (MQ=255)

                                                                                                                             gCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGc                          <  3:201197/149‑1 (MQ=255)

                                                                                                                             gCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGc                          <  2:230055/149‑1 (MQ=255)

                                                                                                                                 aCCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATc                      <  1:392063/149‑1 (MQ=255)

                                                                                                                                    cgcgATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATg                   >  4:549396/1‑149 (MQ=255)

                                                                                                                                    cgcgATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATg                   >  3:409898/1‑149 (MQ=255)

                                                                                                                                     gcgATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATgc                  >  3:393114/1‑149 (MQ=255)

                                                                                                                                        aTGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGcgcg               <  1:676089/149‑1 (MQ=255)

                                                                                                                                           ccATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCa            <  2:363912/149‑1 (MQ=255)

                                                                                                                                             aTTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATg          <  1:408491/149‑1 (MQ=255)

                                                                                                                                                aGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAAc       <  4:722625/149‑1 (MQ=255)

                                                                                                                                                aGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGGTTTCTGCTATCATGCGCGGCATGAAc       >  4:362219/1‑149 (MQ=255)

                                                                                                                                                  tgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTc                             <  3:806846‑M2/122‑1 (MQ=255)

                                                                                                                                                  tgcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTc                             >  4:806846‑M2/4‑125 (MQ=255)

                                                                                                                                                   gcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATa    <  1:304229‑M2/147‑1 (MQ=255)

                                                                                                                                                   gcAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATa    <  3:276778‑M2/147‑1 (MQ=255)

                                                                                                                                                     aaTGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACt  >  2:39361/1‑149 (MQ=255)

CAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACT  >  NC_000913/1100010‑1100306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.