New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1129605 =	58 (0.890)	3 (0.050)	3/244	NT	5.5%	coding (226/417 nt)	flgN	export chaperone for FlgK and FlgL
	?	NC_000913	1129627 =	49 (0.810)					coding (204/417 nt)	flgN	export chaperone for FlgK and FlgL

GTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTG  >  NC_000913/1129462‑1129752                                                                                                                                                |                                                                                                                                                     gTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGtt                                                                                                                                                 <  1:583743/149‑1 (MQ=255)        ccATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAat                                                                                                                                          >  3:336517/1‑149 (MQ=255)              gcagcaacatctctctatggggcagatcaacggcagccagttgcaatggattacagaacaaaaaagctcactgctggcgacgctggattacctcgaacagttacgcaggaaagaacccaatacagcaaatAGCGTTGACTAATA‑TCAAc                                                                                                                                   >  1:345103‑M1/131‑149 (MQ=255)              aGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAAc                                                                                                                                   <  4:73752/149‑1 (MQ=255)               gCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAAc                                                                                                                                   <  4:559109/148‑1 (MQ=255)               gCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAAc                                                                                                                                   >  3:559109/1‑148 (MQ=255)                     gTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACTAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAat                                                                                                                                          <  1:78760/136‑1 (MQ=255)                     gTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAat                                                                                                                                          >  2:78760/1‑136 (MQ=255)                     gTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTAttt                                                                                                                            >  2:296445/1‑149 (MQ=255)                     gTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTAttt                                                                                                                            >  1:473528/1‑149 (MQ=255)                     gTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACAAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTAttt                                                                                                                            >  3:253547/1‑149 (MQ=255)                             tGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTAtt                                                                                                                    <  3:390888/149‑1 (MQ=255)                               cGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAAACAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTgg                                                                                                                  <  2:564366/149‑1 (MQ=255)                                ggTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTggg                                                                                                                 >  1:552036/1‑149 (MQ=255)                                      aaCATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCttt                                                                                                           >  3:325910/1‑149 (MQ=255)                                       aCATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTc                                                                                                          <  4:103100/149‑1 (MQ=255)                                       aCATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTc                                                                                                          >  3:528666/1‑149 (MQ=255)                                           ttCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGc                                                                                                      <  1:334250/149‑1 (MQ=255)                                               aGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTaa                                                                                                  <  2:450425/149‑1 (MQ=255)                                                   ccTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCTGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCATGCCAGCGTTGACTAATA‑TCAACGATATTTGCTGTATTGGGTTCTTTACTGCGTAACTGt                                                                                              >  2:55784/1‑149 (MQ=255)                                                      gTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTAt                                                                                                                     <  2:418598/123‑1 (MQ=255)                                                      gTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTAt                                                                                                                     >  1:418598/1‑123 (MQ=255)                                                      gTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCg                                                                                           >  2:204741/1‑149 (MQ=255)                                                      gTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCg                                                                                           >  2:327854/1‑149 (MQ=255)                                                        tGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAg                                                                                         <  4:550062/149‑1 (MQ=255)                                                         gATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAgg                                                                                        >  4:509823/1‑149 (MQ=255)                                                              cgcTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATc                                                                                   <  4:528666/149‑1 (MQ=255)                                                               gcTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATcc                                                                                  >  3:420863/1‑149 (MQ=255)                                                                cTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTCCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCa                                                                                 >  2:425659/1‑149 (MQ=255)                                                                     tCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTc                                                                                                              >  1:290089/1‑115 (MQ=255)                                                                     tCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTc                                                                                                              <  2:290089/115‑1 (MQ=255)                                                                            ttCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCcagca                                                                     >  1:517328/1‑149 (MQ=255)                                                                                       aGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCttttt                                                          >  1:425704/1‑149 (MQ=255)                                                                                        gCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCtttttt                                                         >  1:559937/1‑149 (MQ=255)                                                                                        gCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCtttttt                                                         <  4:420863/149‑1 (MQ=255)                                                                                         ccGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTg                                                        <  2:425704/149‑1 (MQ=255)                                                                                           gTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGtt                                                      <  2:473528/149‑1 (MQ=255)                                                                                           gTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGtt                                                      <  2:338016/149‑1 (MQ=255)                                                                                            ttATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTc                                                     >  4:467290/1‑149 (MQ=255)                                                                                            ttATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTc                                                     <  4:325910/149‑1 (MQ=255)                                                                                                    aTTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATcc                                             >  3:427135/1‑149 (MQ=255)                                                                                                     ttCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGtt                                                      >  2:132502/1‑139 (MQ=255)                                                                                                     ttCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGtt                                                      <  1:132502/139‑1 (MQ=255)                                                                                                       cATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCAtt                                          <  1:425659/149‑1 (MQ=255)                                                                                                        aTTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTgg                                                                                                                  >  3:125070/1‑76 (MQ=255)                                                                                                        aTTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTgg                                                                                                                  <  4:125070/76‑1 (MQ=255)                                                                                                         tttGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTaa                                                                                     >  2:475309/1‑104 (MQ=255)                                                                                                         tttGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTaa                                                                                     <  1:475309/104‑1 (MQ=255)                                                                                                         tttGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCtttttt                                                         <  2:473926/132‑1 (MQ=255)                                                                                                         tttGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCtttttt                                                         >  1:473926/1‑132 (MQ=255)                                                                                                         tttGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGc                                        >  2:435016/1‑149 (MQ=255)                                                                                                             gCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACt                                    <  3:509823/149‑1 (MQ=255)                                                                                                                                acaGTAATTTCGTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCGACTGGCTGCCGTTGATCTGccc                 >  3:332749/1‑149 (MQ=255)                                                                                                                                  ccaatacagcaaatAGCGTTGA‑TATTAGTCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGa                        <  4:36121‑M1/126‑1 (MQ=255)                                                                                                                                  ccaatacagcaaatAGCGTTGA‑TATTAGTCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGa                        >  3:36121‑M1/15‑140 (MQ=255)                                                                                                                                  aGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCa               <  4:184993/149‑1 (MQ=255)                                                                                                                                  aGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCa               >  3:184993/1‑149 (MQ=255)                                                                                                                                      aTTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATaga           <  2:259758/149‑1 (MQ=255)                                                                                                                                        ttCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATagaga         >  1:391345/1‑149 (MQ=255)                                                                                                                                         tCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATagagag        >  1:470674/1‑149 (MQ=255)                                                                                                                                          ccTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCGTAgagaga       <  3:539949/149‑1 (MQ=255)                                                                                                                                               cAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTtg  >  1:81521/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                     GTTCGCCCCATATAGCGTCGGTTCCTGATGCGGTTTCAACATTTCCAGCGCCTGTTGATTGCGCTCAATCTGTCCTTCCAGTAACCAGCCGTTATGTTGATTCATTTGGCGTAGTTGCTGCGTTTTCACAGTAATTTCCTGCCAGCGTTGACTAATA‑TCAACGCTATTTGCTGTATTGGGTTCTTTCCTGCGTAACTGTTCGAGGTAATCCAGCGTCGCCAGCAGTGAGCTTTTTTGTTCTGTAATCCATTGCAACTGGCTGCCGTTGATCTGCCCCATAGAGAGATGTTG  >  NC_000913/1129462‑1129752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.