New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1735255 =58 (0.890)7 (0.120) 7/238 NT 12.1% intergenic (+5/‑123) mepH/sodB murein DD‑endopeptidase, space‑maker hydrolase/superoxide dismutase, Fe
?NC_000913 1735283 = 49 (0.830)intergenic (+33/‑95) mepH/sodB murein DD‑endopeptidase, space‑maker hydrolase/superoxide dismutase, Fe

TTATTCAGTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTACCATATGCTAAAGATG  >  NC_000913/1735135‑1735417
                                                                                                                                                     |                                                                                                                                      
gtagtgcaggtaattcgaatgacattgctactctcctttattattaatttgcatacgtacaatagccttattgtgcgtatggatagggtagcaaattaaaaggtgagacaaaagatgaacTT‑ACCCTGTTGTTACGGCAACAGGGTAAg                                                                                                                                        >  3:324044‑M1/121‑149 (MQ=255)
 tATTCAGTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGt                                                                                                                                       <  1:283985/149‑1 (MQ=255)
  agtgcaggtaattcgaatgacattgctactctcctttattattaatttgcatacgtacaatagccttattgtgcgtatggatagggtagcaaattaaaaggtgagacaaaagatgaacTTTACCCTGTTGTTACGGCAACAGGGTAAGt                                                                                                                                       >  3:13814‑M1/119‑149 (MQ=255)
    tCAGTCACCGCGCACAGGTCAGGAAATTCACATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAACAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCa                                                                                                                                    <  1:5068/149‑1 (MQ=255)
      aGTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATc                                                                                                                                  >  1:478159/1‑149 (MQ=255)
       gTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCt                                                                                                                                 >  1:186537/1‑149 (MQ=255)
          aCCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCtttt                                                                                                                              >  3:280689/1‑149 (MQ=255)
             gcgcACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGtc                                                                                                                           <  2:186537/149‑1 (MQ=255)
                cacaGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCa                                                                                                                        <  2:116586/149‑1 (MQ=255)
                 acaGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCAc                                                                                                                       >  4:102634/1‑149 (MQ=255)
                 acaGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCAc                                                                                                                       >  3:300759/1‑149 (MQ=255)
                   aGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCt                                                                                                                     <  2:33202/149‑1 (MQ=255)
                     gTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCttt                                                                                                                   <  3:148021/149‑1 (MQ=255)
                     gTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCttt                                                                                                                   >  3:4694/1‑149 (MQ=255)
                     gTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCtt                                                                                                                    >  1:216992/1‑148 (MQ=255)
                     gTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCtt                                                                                                                    <  2:216992/148‑1 (MQ=255)
                        aGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTaa                                                                                                                <  4:275159/149‑1 (MQ=255)
                        aGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTaa                                                                                                                >  3:424330/1‑149 (MQ=255)
                          gAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAAtt                                                                                                              <  4:300759/149‑1 (MQ=255)
                             aTTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGc                                                                                                           <  2:301555/149‑1 (MQ=255)
                              ttCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCt                                                                                                          >  1:428968/1‑149 (MQ=255)
                                 aaaTCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTAcc                                                                                                       >  3:500896/1‑149 (MQ=255)
                                 aaaTCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTAcc                                                                                                       >  3:560517/1‑149 (MQ=255)
                                 aaaTCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTAcc                                                                                                       >  1:93531/1‑149 (MQ=255)
                                  aaTCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTAccc                                                                                                      >  2:2680/1‑149 (MQ=255)
                                           tctcAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATAc                                                                                             >  1:551073/1‑149 (MQ=255)
                                             tcAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGc                                                                                           >  1:296158/1‑149 (MQ=255)
                                                     gACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAg                                                                                   >  4:42202/1‑149 (MQ=255)
                                                        tactGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCt                                                                                >  3:234853/1‑149 (MQ=255)
                                                               aGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTAc                                                                         >  2:256335/1‑149 (MQ=255)
                                                               aGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTAc                                                                         <  2:478159/149‑1 (MQ=255)
                                                                  gcCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTa                                                                      <  4:75479/149‑1 (MQ=255)
                                                                   ccACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTAt                                                                     >  1:329884/1‑149 (MQ=255)
                                                                     aCTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGc                                                                   <  2:197788/149‑1 (MQ=255)
                                                                            tGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaa                                                            <  1:314703/149‑1 (MQ=255)
                                                                             ggCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaat                                                           <  2:188632/149‑1 (MQ=255)
                                                                                gcTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaataat                                                        >  2:173930/1‑149 (MQ=255)
                                                                                  tcgtcgGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaataataa                                                      <  2:551073/149‑1 (MQ=255)
                                                                                  tcgtcgGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaataataa                                                      >  2:245264/1‑149 (MQ=255)
                                                                                   cgtcgGGTAATGACCCCAAAAACACTTCGCTAAGACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGTTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATaaa                                                     <  4:433891/149‑1 (MQ=255)
                                                                                   cgtcgGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATaaa                                                     <  2:394159/149‑1 (MQ=255)
                                                                                   cgtcgGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATaaa                                                     <  4:4694/149‑1 (MQ=255)
                                                                                           aaTGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTa                                             <  3:102634/149‑1 (MQ=255)
                                                                                                 cccAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATg                                       <  2:329884/149‑1 (MQ=255)
                                                                                                 cccAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATg                                       >  2:105612/1‑149 (MQ=255)
                                                                                                  ccAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGt                                      >  2:69585/1‑149 (MQ=255)
                                                                                                       aaCACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACACACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTc                                 <  4:138135/149‑1 (MQ=255)
                                                                                                            ttCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAAtt                            >  2:210234/1‑149 (MQ=255)
                                                                                                            ttCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAAtt                            >  2:345902/1‑149 (MQ=255)
                                                                                                              cGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTAc                          <  2:33229/149‑1 (MQ=255)
                                                                                                               gCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaa                                                            >  3:131599/1‑114 (MQ=255)
                                                                                                               gCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaa                                                            <  4:131599/114‑1 (MQ=255)
                                                                                                                 tAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTg                       >  3:379084/1‑149 (MQ=255)
                                                                                                                      acttaccctgttgccgtaacaacagggtaaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACt                   >  3:13814‑M2/32‑149 (MQ=255)
                                                                                                                        cttaccctgttgccgtaacaacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTAc                 >  3:324044‑M2/30‑149 (MQ=255)
                                                                                                                         ttaccctgttgccgtaacaacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAgg                                                                                  >  4:103810‑M2/29‑83 (MQ=255)
                                                                                                                         ttaccctgttgccgtaacaacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAgg                                                                                  <  3:103810‑M2/55‑1 (MQ=255)
                                                                                                                            CCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTACCata             >  2:296158‑M1/1‑149 (MQ=255)
                                                                                                                             cctgttgccgtaacaacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTa                                             >  2:277352‑M2/25‑116 (MQ=255)
                                                                                                                             cctgttgccgtaacaacagggtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTa                                             <  1:277352‑M2/92‑1 (MQ=255)
                                                                                                                             CCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTACCatat            <  3:268609‑M1/149‑1 (MQ=255)
                                                                                                                              CTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTACCATATg           <  2:287285‑M1/149‑1 (MQ=255)
                                                                                                                               tgttgccgtaacaacagggtaaGTTCATCTTTTGTCCCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTTCACTACCATATGc          >  3:60894‑M2/23‑149 (MQ=255)
                                                                                                                                     tACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTACCATATGCTAAAGa    >  1:176157/1‑149 (MQ=255)
                                                                                                                                       cGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCAGCACTACCATATGCTAAAGATg  <  4:234853/149‑1 (MQ=255)
                                                                                                                                                 gtatGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaa                                                            <  2:425973‑M2/77‑1 (MQ=255)
                                                                                                                                                 gtaaGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATtaa                                                            >  1:425973‑M2/5‑81 (MQ=255)
                                                                                                                                                     |                                                                                                                                      
TTATTCAGTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAAAACTTT‑ACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCACAATAAGGCTATTGTACGTATGCAAATTAATAATAAAGGAGAGTAGCAATGTCATTCGAATTACCTGCACTACCATATGCTAAAGATG  >  NC_000913/1735135‑1735417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.