BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1853642	110 (0.850)	6 (0.050)	5/238	NT	5.5%	intergenic (+45/+53)	acuC/ccpA	acetoin utilization protein AcuC/catabolite control protein A
*	?	CP000730	= 1853674	105 (0.870)	6 (0.050)	5/238	NT	5.5%	intergenic (+77/+21)	acuC/ccpA	acetoin utilization protein AcuC/catabolite control protein A

Only 100 of 139 total aligned reads displayed.

TTATACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAA  >  CP000730/1853504‑1853781

ttATACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGCTAAATAAAAGGCAttctt                                                                                                                                            >  1:465167/1‑141 (MQ=255)

ttATACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCAttctt                                                                                                                                            >  2:1553357/1‑141 (MQ=255)

ttATACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCAttctt                                                                                                                                            <  1:507364/141‑1 (MQ=255)

ttATACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCAttctt                                                                                                                                            <  1:69862/141‑1 (MQ=255)

           tCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCat                                                                                                                                <  2:752949/141‑1 (MQ=255)

            cccccGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCata                                                                                                                               <  1:1537544/141‑1 (MQ=255)

               ccGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATaa                                                                                                                            >  1:1033015/1‑141 (MQ=255)

               ccGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATaa                                                                                                                            >  2:1375296/1‑141 (MQ=255)

                    caAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGTCATTCTTCCAAC‑ACCCATATAATTTgg                                                                                                                       >  2:520581/1‑141 (MQ=255)

                     aaaaGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTggg                                                                                                                      >  2:944312/1‑141 (MQ=255)

                     aaaaGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTggg                                                                                                                      >  1:508446/1‑141 (MQ=255)

                      aaaGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGt                                                                                                                     >  2:1278912/1‑141 (MQ=255)

                       taGAAATGAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTc                                                                                                                    >  2:923936/2‑141 (MQ=255)

                       aaGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTc                                                                                                                    >  2:1105615/1‑141 (MQ=255)

                        aGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTAGGGTCg                                                                                                                   >  2:1218537/1‑141 (MQ=255)

                         gAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTGTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGt                                                                                                                  <  2:392423/141‑1 (MQ=255)

                           aaTTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCatctaacgacccaaattatatgggtgttg                                                                                                                 <  1:806788‑M1/141‑30 (MQ=255)

                            attattGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCatctaacgacccaaattatatgggtgttgg                                                                                                                <  2:321105‑M1/141‑31 (MQ=255)

                            aTTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAg                                                                                                               >  1:1654327/1‑141 (MQ=255)

                               agcgAAAAAAATAAAAAATTAGCAATACATACAGCGAGTTGGAACGAATAAAATCGTAAAAAAGTAAGCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCAATATTCAACA‑ACCAATATAACACGGATCGTTAGATg                                                                                                            >  2:410263/4‑141 (MQ=255)

                               aGTGAAAAAAATAAAAACTTAGCTTTACATATAGCGAGATGGTACGAATCTAAACGTCAATAAGTAAACTAATCTGCAACGATTTTACAAGATAAATAAAAGACATTCTTCCACC‑CACAATATAATTTGCGTCGTTAGATg                                                                                                            >  2:410311/1‑141 (MQ=255)

                                gTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATga                                                                                                           <  2:221515‑M2/141‑3 (MQ=255)

                                gTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATga                                                                                                           <  2:1256498‑M2/141‑3 (MQ=255)

                                 tGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCatctaacgacccaaattatatgggtgttggaagaa                                                                                                           <  1:1632044‑M1/141‑36 (MQ=255)

                                   aaaaaaaTAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatg                                                                                                        >  2:1393454‑M2/1‑136 (MQ=255)

                                    aaaaaaacaaaaatTCGCTATACATATCGCGCGTTGGTACGACTCTACTCGTACATAAGTAACCTAATCTGCAACGAGTTTAATAGATAACTACACGGAATTATTCCCAC‑CCCCATCTAATTCGGGTCGTTAGATGAATGc                                                                                                       <  2:414133/141‑1 (MQ=255)

                                     aaaaataaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgcc                                                                                                      >  1:473842‑M2/1‑134 (MQ=255)

                                      aaaataaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgcct                                                                                                     >  2:183307‑M2/1‑133 (MQ=255)

                                      aaaataaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgcct                                                                                                     >  1:267673‑M2/1‑133 (MQ=255)

                                      aaaataaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCGACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgcct                                                                                                     >  1:1300222‑M2/1‑133 (MQ=255)

                                           aaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAAttt                                                                                                >  1:1079912/1‑141 (MQ=255)

                                             aaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTtg                                                                                              <  1:1218537/141‑1 (MQ=255)

                                                 ttAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGaa                                                                                          <  1:1412611/141‑1 (MQ=255)

                                                      tttACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATACCTAATTTTGTGAatttat                                                                                     >  1:290498/1‑141 (MQ=255)

                                                       ttACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAatttatt                                                                                    <  2:103959/141‑1 (MQ=255)

                                                           atatAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGt                                                                                <  1:758827/141‑1 (MQ=255)

                                                           atatAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGt                                                                                <  1:1561303/141‑1 (MQ=255)

                                                           atatAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGt                                                                                <  1:1011989/141‑1 (MQ=255)

                                                              taGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGt                                                                             <  2:662283/141‑1 (MQ=255)

                                                                   aGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTc                                                                        >  1:128090/1‑141 (MQ=255)

                                                                    gTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCg                                                                       >  2:716474/1‑141 (MQ=255)

                                                                      tGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGt                                                                     >  2:623586/1‑141 (MQ=255)

                                                                        gTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAt                                                                   >  1:331284/1‑141 (MQ=255)

                                                                        gTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGCAGTTAGCTGAATGCCTAATTTTGTGCATTTATTTTGTAGTTCCTCGGTAt                                                                   >  1:1262914/1‑141 (MQ=255)

                                                                         tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                  >  1:1342039/1‑141 (MQ=255)

                                                                         tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                  <  2:318075/141‑1 (MQ=255)

                                                                         tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTATAGTTTCTCGGGAtt                                                                  >  1:894489/1‑141 (MQ=255)

                                                                         tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTAGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                  <  1:797764/141‑1 (MQ=255)

                                                                          aCGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTc                                                                 >  1:1337814/1‑141 (MQ=255)

                                                                          aCGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCATCTAACGACCCAAATTATATGGGT‑GTTGGAAgaatgccttttatttatcttttaaaatcgttgcagattaggtta                                                                 >  1:1076997‑M2/1‑97 (MQ=255)

                                                                           cGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCa                                                                <  1:399404/141‑1 (MQ=255)

                                                                            gAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAGGGCATTCTGCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCaa                                                               <  1:1567418/141‑1 (MQ=255)

                                                                            gAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCaa                                                               <  1:20008/141‑1 (MQ=255)

                                                                              aTCTACTCGGCAATAAGTAACCTAATCTGCAACTATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAAtt                                                             <  2:561272/141‑1 (MQ=255)

                                                                                 tACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtg                                                          >  2:1464314/1‑141 (MQ=255)

                                                                                 tACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtg                                                          >  1:162905/1‑141 (MQ=255)

                                                                                  aCTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtgt                                                         <  1:394871/141‑1 (MQ=255)

                                                                                   cTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtgtg                                                        >  2:455346/1‑141 (MQ=255)

                                                                                     cGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAg                                                      >  1:622308/1‑141 (MQ=255)

                                                                                      ttCAAAAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCTGTATTCAATTCTGTGAgg                                                     <  2:509644/140‑1 (MQ=255)

                                                                                      gTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAgg                                                     <  2:1441060/141‑1 (MQ=255)

                                                                                            aaGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAAc                                               >  2:1641467/1‑141 (MQ=255)

                                                                                            aaGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAAc                                               >  2:108928/1‑141 (MQ=255)

                                                                                             aGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACt                                              >  2:1098984/1‑141 (MQ=255)

                                                                                             aGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTCTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACt                                              >  2:802071/1‑141 (MQ=255)

                                                                                               tAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCttccaacacccatataatttgggtcgttagatgaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgt                                             >  1:1076997‑M1/1‑44 (MQ=255)

                                                                                               tAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTTTGAGGTAAAACTAc                                            <  2:30173/141‑1 (MQ=255)

                                                                                               tAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTAc                                            >  1:204721/1‑141 (MQ=255)

                                                                                                 aCCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACAt                                          <  2:1637966/141‑1 (MQ=255)

                                                                                                  ccTAATCTGCAACGATTTTAAAAGATACATCAAAGGCAATCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACAtt                                         >  1:880709/1‑141 (MQ=255)

                                                                                                     aaTCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTgg                                      <  2:1196044/141‑1 (MQ=255)

                                                                                                        cTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGttc                                   >  2:1335686/1‑141 (MQ=255)

                                                                                                         tGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGttct                                  <  2:1421392/141‑1 (MQ=255)

                                                                                                             aCGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTa                              <  1:1139276/141‑1 (MQ=255)

                                                                                                              cGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTAt                             <  1:231277/141‑1 (MQ=255)

                                                                                                                 ttttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCtt                          <  1:229121/141‑1 (MQ=255)

                                                                                                                  tttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCttt                         <  1:322570/141‑1 (MQ=255)

                                                                                                                  tttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCttt                         <  1:618603/141‑1 (MQ=255)

                                                                                                                   ttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCtttt                        <  1:1203048/141‑1 (MQ=255)

                                                                                                                   ttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCtttt                        >  1:303115/1‑141 (MQ=255)

                                                                                                                     aaaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCCTTAGATGAATGACTAATCTTGTGAATTTATTTTGTCGTTTCTCGGTATTCAATTCTGTGAGCTACAACTACATTTGGTTCTTCAAACTTCTCa                      >  2:686998/1‑141 (MQ=255)

                                                                                                                      aaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                  <  1:552470/96‑1 (MQ=255)

                                                                                                                      aaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATCAGTGTCGTTAGATGTATGCCTAATTCTGTGAATTTATTTTGTATTTCCTCGGTATTCAATTGTGTTAGGTAAAACTCCATTTTGTTCTTCTTTCTATTcgt                     >  2:214830/1‑139 (MQ=255)

                                                                                                                           taaataaaAGGCATTCttccaacacccatataatttgggtcgttagatgaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattt                 >  1:170983‑M1/1‑16 (MQ=255)

                                                                                                                           taaataaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTc                >  1:1000921/1‑141 (MQ=255)

                                                                                                                           taaataaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAA‑TTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCa               <  2:1140426/141‑1 (MQ=255)

                                                                                                                            aaataaaAGTCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCa               <  1:520581/141‑1 (MQ=255)

                                                                                                                               taaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGCGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatat            >  2:10425/1‑141 (MQ=255)

                                                                                                                               taaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatat            >  2:10260/1‑141 (MQ=255)

                                                                                                                                aaaaGGCATTCTTCCTAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatata           <  1:1375296/141‑1 (MQ=255)

                                                                                                                                 aaaGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatatat          >  2:1467121/1‑141 (MQ=255)

                                                                                                                                  aaGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATAtt         <  1:193637/141‑1 (MQ=255)

                                                                                                                                   aGGCATTCatctaacgacccaaattatatgggtgttggaagaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttt         >  2:183307‑M1/1‑8 (MQ=255)

                                                                                                                                   aGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATAttt        <  1:1105615/141‑1 (MQ=255)

                                                                                                                                   aGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATAttt        <  2:907899/141‑1 (MQ=255)

                                                                                                                                     gCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTg      <  1:1182207/141‑1 (MQ=255)

                                                                                                                                        ttcttcCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttttttca   <  1:1632044‑M2/141‑107 (MQ=255)

                                                                                                                                         tcttcCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTTTTTTTTTTTGTTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTtaa  >  2:1102516/1‑141 (MQ=255)

                                                                                                                                         tCatctaacgacccaaattatatgggtgttggaagaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttttttcac   <  2:221515‑M1/141‑140 (MQ=255)

                                                                                                                                         tCatctaacgacccaaattatatgggtgttggaagaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttttttcac   <  2:1256498‑M1/141‑140 (MQ=255)

TTATACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAA  >  CP000730/1853504‑1853781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.