BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1853642	110 (0.850)	6 (0.050)	5/238	NT	5.5%	intergenic (+45/+53)	acuC/ccpA	acetoin utilization protein AcuC/catabolite control protein A
*	?	CP000730	= 1853674	105 (0.870)	6 (0.050)	5/238	NT	5.5%	intergenic (+77/+21)	acuC/ccpA	acetoin utilization protein AcuC/catabolite control protein A

Only 100 of 131 total aligned reads displayed.

AGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCATATAA  >  CP000730/1853535‑1853814

agcgAAAAAAATAAAAAATTAGCAATACATACAGCGAGTTGGAACGAATAAAATCGTAAAAAAGTAAGCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCAATATTCAACA‑ACCAATATAACACGGATCGTTAGATg                                                                                                                                             >  2:410263/4‑141 (MQ=255)

aGTGAAAAAAATAAAAACTTAGCTTTACATATAGCGAGATGGTACGAATCTAAACGTCAATAAGTAAACTAATCTGCAACGATTTTACAAGATAAATAAAAGACATTCTTCCACC‑CACAATATAATTTGCGTCGTTAGATg                                                                                                                                             >  2:410311/1‑141 (MQ=255)

aGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGAACGAATCTACACGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑AACCATATAATTTGGGAAGTTAGAta                                                                                                                                             >  2:410264/1‑140 (MQ=255)

 gTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATga                                                                                                                                            <  2:221515‑M2/141‑3 (MQ=255)

       aaaataaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgcct                                                                                                                                      >  1:267673‑M2/1‑133 (MQ=255)

       aaaataaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCGACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgcct                                                                                                                                      >  1:1300222‑M2/1‑133 (MQ=255)

            aaaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAAttt                                                                                                                                 >  1:1079912/1‑141 (MQ=255)

             aaaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAAtttt                                                                                                                                >  2:1455963/1‑141 (MQ=255)

              aaaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTtg                                                                                                                               <  1:1218537/141‑1 (MQ=255)

               aaatTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCATCTAACGACCCAAATTATATGGGT‑GTTGGAAgaatgccttttattta                                                                                                                              >  1:170983‑M2/1‑125 (MQ=255)

                  ttAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGaa                                                                                                                           <  1:1412611/141‑1 (MQ=255)

                    aGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAatt                                                                                                                         <  2:12281/141‑1 (MQ=255)

                       tttACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAatttat                                                                                                                      >  2:28009/1‑141 (MQ=255)

                       tttACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATACCTAATTTTGTGAatttat                                                                                                                      >  1:290498/1‑141 (MQ=255)

                          aCATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTAtttt                                                                                                                   <  1:11009/141‑1 (MQ=255)

                            atatAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGt                                                                                                                 <  1:1011989/141‑1 (MQ=255)

                               taGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGt                                                                                                              <  2:662283/141‑1 (MQ=255)

                                     gTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCg                                                                                                        >  2:716474/1‑141 (MQ=255)

                                         gTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAt                                                                                                    >  1:331284/1‑141 (MQ=255)

                                         gTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGCAGTTAGCTGAATGCCTAATTTTGTGCATTTATTTTGTAGTTCCTCGGTAt                                                                                                    >  1:1262914/1‑141 (MQ=255)

                                          tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                                                   <  2:318075/141‑1 (MQ=255)

                                          tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                                                   >  1:1342039/1‑141 (MQ=255)

                                          tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTATAGTTTCTCGGGAtt                                                                                                   >  1:894489/1‑141 (MQ=255)

                                          tACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTAGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                                                   <  1:797764/141‑1 (MQ=255)

                                           aCGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTc                                                                                                  >  1:1337814/1‑141 (MQ=255)

                                            cGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCa                                                                                                 <  1:399404/141‑1 (MQ=255)

                                             gAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAGGGCATTCTGCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCaa                                                                                                <  1:1567418/141‑1 (MQ=255)

                                             gAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCaa                                                                                                <  1:20008/141‑1 (MQ=255)

                                              aaTCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGTGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAAt                                                                                               <  1:728416/141‑1 (MQ=255)

                                               aTCTACTCGGCAATAAGTAACCTAATCTGCAACTATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAAtt                                                                                              <  2:561272/141‑1 (MQ=255)

                                                  tACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtg                                                                                           >  1:162905/1‑141 (MQ=255)

                                                   aCTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAATGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTctagcctgt                                                                                          >  1:1179264/1‑133 (MQ=255)

                                                   aCTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtgt                                                                                          >  2:1112972/1‑141 (MQ=255)

                                                   aCTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtgt                                                                                          <  1:394871/141‑1 (MQ=255)

                                                    cTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCtgtg                                                                                         >  2:455346/1‑141 (MQ=255)

                                                      cGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAg                                                                                       >  1:622308/1‑141 (MQ=255)

                                                       ttCAAAAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCTGTATTCAATTCTGTGAgg                                                                                      <  2:509644/140‑1 (MQ=255)

                                                       gTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAgg                                                                                      <  2:1441060/141‑1 (MQ=255)

                                                             aaGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAAc                                                                                >  2:1641467/1‑141 (MQ=255)

                                                             aaGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAAc                                                                                >  2:108928/1‑141 (MQ=255)

                                                             aaGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAAc                                                                                <  2:682757/141‑1 (MQ=255)

                                                              aGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACt                                                                               >  2:1297714/1‑141 (MQ=255)

                                                              aGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACt                                                                               >  2:1098984/1‑141 (MQ=255)

                                                                tAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTAc                                                                             >  1:513854/1‑141 (MQ=255)

                                                                tAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTAc                                                                             >  1:204721/1‑141 (MQ=255)

                                                                 aaCCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACa                                                                            >  1:1429376/1‑141 (MQ=255)

                                                                  aCCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACAt                                                                           <  2:1637966/141‑1 (MQ=255)

                                                                    cTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACAttt                                                                         <  2:1019144/141‑1 (MQ=255)

                                                                      aaTCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTgg                                                                       <  2:1196044/141‑1 (MQ=255)

                                                                         cTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGttc                                                                    >  2:1335686/1‑141 (MQ=255)

                                                                         cTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGttc                                                                    <  1:609726/141‑1 (MQ=255)

                                                                          tGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGttct                                                                   <  2:1421392/141‑1 (MQ=255)

                                                                            cAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGttcttc                                                                 <  1:1594554/141‑1 (MQ=255)

                                                                                  ttttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCtt                                                           <  1:229121/141‑1 (MQ=255)

                                                                                   tttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGGAGGCCGAATGTTGGGAATGTAGTGTGTAGGTCCTCGGTATTCAATGCTGGGAGGTAAAACTACATTTGGTTCTTCTATCtgt                                                          >  1:1242639/1‑139 (MQ=255)

                                                                                   tttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCttt                                                          <  1:618603/141‑1 (MQ=255)

                                                                                    ttAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCtttt                                                         >  1:303115/1‑141 (MQ=255)

                                                                                     tAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTc                                                        >  1:357847/1‑141 (MQ=255)

                                                                                      aaaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCa                                                       >  2:744984/1‑141 (MQ=255)

                                                                                      aaaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCCTTAGATGAATGACTAATCTTGTGAATTTATTTTGTCGTTTCTCGGTATTCAATTCTGTGAGCTACAACTACATTTGGTTCTTCAAACTTCTCa                                                       >  2:686998/1‑141 (MQ=255)

                                                                                       aaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTAtt                                                                                                   >  2:552470/1‑96 (MQ=255)

                                                                                       aaaGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATCAGTGTCGTTAGATGTATGCCTAATTCTGTGAATTTATTTTGTATTTCCTCGGTATTCAATTGTGTTAGGTAAAACTCCATTTTGTTCTTCTTTCTATTcgt                                                      >  2:214830/1‑139 (MQ=255)

                                                                                         aGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCg                                                    >  2:919438/1‑141 (MQ=255)

                                                                                            taaataaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTc                                                 >  1:1000921/1‑141 (MQ=255)

                                                                                            taaataaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAA‑TTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCa                                                <  2:1140426/141‑1 (MQ=255)

                                                                                             aaataaaAGTCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCa                                                <  1:520581/141‑1 (MQ=255)

                                                                                              aataaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCat                                               <  1:225814/141‑1 (MQ=255)

                                                                                                taaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGCGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatat                                             >  2:10425/1‑141 (MQ=255)

                                                                                                taaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatat                                             <  1:1641467/141‑1 (MQ=255)

                                                                                                taaaAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatat                                             >  2:10260/1‑141 (MQ=255)

                                                                                                 aaaaGGCATTCTTCCTAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatata                                            <  1:1375296/141‑1 (MQ=255)

                                                                                                  aaaGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCatatat                                           >  2:1467121/1‑141 (MQ=255)

                                                                                                    aGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATAttt                                         <  1:1105615/141‑1 (MQ=255)

                                                                                                    aGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATAttt                                         <  2:907899/141‑1 (MQ=255)

                                                                                                      gCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTg                                       <  1:1182207/141‑1 (MQ=255)

                                                                                                              ccAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttttttcaataat                               <  2:321105‑M2/141‑112 (MQ=255)

                                                                                                               cAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttttttcactaatt                              <  1:806788‑M2/141‑113 (MQ=255)

                                                                                                               cAAC‑ACCCATATAATTTGGGTCGTTAGATgaatgccttttatttatcttttaaaatcgttgcagattaggttacttattgacgagtagattcgtaccaactcgctatatgtaaagctaattttttatttttttcactaatt                              <  1:806444‑M2/141‑113 (MQ=255)

                                                                                                               cAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAgc                              <  1:45594/141‑1 (MQ=255)

                                                                                                               cAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTAGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATATGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAgc                              >  2:485119/1‑141 (MQ=255)

                                                                                                                      ccATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATcc                        <  1:1293493/141‑1 (MQ=255)

                                                                                                                        ctataATNTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTCTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCt                      <  2:1242639/140‑1 (MQ=255)

                                                                                                                          ataATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTAc                    <  2:331284/141‑1 (MQ=255)

                                                                                                                          ataATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTAc                    <  1:1645004/141‑1 (MQ=255)

                                                                                                                             aTTTGGGTCGTTAGATGACTGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGc                 <  1:1061499/141‑1 (MQ=255)

                                                                                                                                 gggTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCg             >  2:850700/1‑141 (MQ=255)

                                                                                                                                 gggTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCg             >  2:600126/1‑141 (MQ=255)

                                                                                                                                 gggTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCg             <  1:7194/141‑1 (MQ=255)

                                                                                                                                    tCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGata          <  1:368755/141‑1 (MQ=255)

                                                                                                                                    tCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGata          <  2:1116625/141‑1 (MQ=255)

                                                                                                                                    tCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGata          <  2:1048144/141‑1 (MQ=255)

                                                                                                                                      gTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATc        <  2:41503/141‑1 (MQ=255)

                                                                                                                                      gTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTACTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATc        >  1:1198985/1‑141 (MQ=255)

                                                                                                                                       ttAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCa       >  2:1592950/1‑141 (MQ=255)

                                                                                                                                        tAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCat      <  2:666687/141‑1 (MQ=255)

                                                                                                                                          gATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACAt                                                                           >  1:524051/1‑70 (MQ=255)

                                                                                                                                          gATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATc                         <  1:683527/120‑1 (MQ=255)

                                                                                                                                           aTGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCAtata   <  2:1285869/141‑1 (MQ=255)

                                                                                                                                            tGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCATATaa  >  1:557359/1‑141 (MQ=255)

                                                                                                                                            tGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCATATaa  >  1:1016936/1‑141 (MQ=255)

AGTGAAAAAAATAAAAAATTAGCTTTACATATAGCGAGTTGGTACGAATCTACTCGTCAATAAGTAACCTAATCTGCAACGATTTTAAAAGATAAATAAAAGGCATTCTTCCAAC‑ACCCATATAATTTGGGTCGTTAGATGAATGCCTAATTTTGTGAATTTATTTTGTAGTTCCTCGGTATTCAATTCTGTGAGGTAAAACTACATTTGGTTCTTCTATCTTTTCATCGTTCATATATTTTGTTAATAAGCGCATCCCTACTGCACCGATATCATATAA  >  CP000730/1853535‑1853814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.