BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2252658 =	94 (1.060)	5 (0.060)	4/246	NT	5.5%	intergenic (+94/+58)	luxS/USA300HOU_2124	S‑ribosylhomocysteine lyase/hypothetical membrane protein
*	?	CP000730	2252704 =	82 (0.970)	5 (0.060)	4/246	NT	5.5%	intergenic (+140/+12)	luxS/USA300HOU_2124	S‑ribosylhomocysteine lyase/hypothetical membrane protein

Only 100 of 105 total aligned reads displayed.

TAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTAT  >  CP000730/2252518‑2252795

tAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaa                                                                                                                                            >  2:1025417/1‑141 (MQ=255)

tAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaa                                                                                                                                            >  1:798299/1‑141 (MQ=255)

tAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaa                                                                                                                                            >  1:287029/1‑141 (MQ=255)

      aacgaaacgaATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGa                                                                                                                                      <  2:663723/141‑1 (MQ=255)

       acgaaacgaaTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGaa                                                                                                                                     <  1:977459/141‑1 (MQ=255)

        cgaaacgaaTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAAc                                                                                                                                    >  1:734300/1‑141 (MQ=255)

         gaacaaaaTGGCATGATGTTTTCGATACAGTAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACa                                                                                                                                   <  2:1057262/135‑1 (MQ=255)

              gaaTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑a                                                                                                                             >  1:784914/1‑141 (MQ=255)

              atctatatggcagttaaaaagttacctttaggagataaacaattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATG‑a                                                                                                                             >  1:92016‑M1/127‑141 (MQ=255)

                aTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑aaa                                                                                                                           <  1:519636/141‑1 (MQ=255)

                      tgatgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATAGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTaa                                                                                                                     <  2:312657/141‑1 (MQ=255)

                       gatgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTaaa                                                                                                                    >  1:479748/1‑141 (MQ=255)

                        atgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTaaaa                                                                                                                   >  2:925773/1‑141 (MQ=255)

                        atgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTaaaa                                                                                                                   <  1:479016/141‑1 (MQ=255)

                        atgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTaaaa                                                                                                                   >  2:390444/1‑141 (MQ=255)

                         tgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAAt                                                                                                                  <  1:168564/141‑1 (MQ=255)

                          gTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATc                                                                                                                 >  2:668217/1‑141 (MQ=255)

                           ttttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCt                                                                                                                <  1:840463/141‑1 (MQ=255)

                           ttttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCt                                                                                                                <  1:685493/141‑1 (MQ=255)

                           ttttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCt                                                                                                                <  1:121297/141‑1 (MQ=255)

                             ttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAGAAAATCGAACAAATG‑AAAAAGTAAAATCttt                                                                                                              >  1:598788/1‑141 (MQ=255)

                               cGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTaa                                                                                                            >  2:601540/1‑141 (MQ=255)

                               cGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTaa                                                                                                            >  2:686719/1‑141 (MQ=255)

                                ggTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAAc                                                                                                           >  1:308281/1‑141 (MQ=255)

                                   aCAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTGTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACAtt                                                                                                        <  1:20441/141‑1 (MQ=255)

                                    cAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACAttt                                                                                                       >  2:854487/1‑141 (MQ=255)

                                    cAGGAAAACAAATTTTATTCATTCAAGTTAATAAGAAAAGAAGTCGAACAATGATTTTACAATCACCATTGTCCAACTGCTTTTTATTATGCTTCAAAATCAAAAAATCGAACAAATG‑AACAAGTAAAATCTTTTACAttt                                                                                                       >  2:1038031/1‑141 (MQ=255)

                                    cAGGAAAACAAATCTTAGTCAATAAAGTTAATCAGAAAAGCAGTCGAAAAAAAAAAAAAAAAACATCATTGTTCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACAttt                                                                                                       <  2:205910/141‑1 (MQ=255)

                                     aGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCGTCAAAGTCAACAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATATg                                                                                                      >  2:848414/1‑141 (MQ=255)

                                      ggAAAATAAATATTAGTCAATCAAGTTAATCAGAAAAGTAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGt                                                                                                     <  2:674817/141‑1 (MQ=255)

                                        aaaaTAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAAAGAGTTTACAATCGCCATTGTACAACTGCTTTTTATTATGCTTCAAAGTCAAAGAATCGAACAAATG‑AAACAGTAACACCTTTAACATATGTcc                                                                                                   >  2:805630/1‑141 (MQ=255)

                                         ttaggagataaacaattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCg                                                                                                  >  1:127429‑M1/100‑141 (MQ=255)

                                         aaataaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCTAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATTCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCg                                                                                                  >  2:933009/1‑141 (MQ=255)

                                          taggagataaacaattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATG‑AAAAAGTAGAATCTTTAACATTTGTCCGa                                                                                                 >  1:825099‑M1/99‑141 (MQ=255)

                                          aataaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGa                                                                                                 >  1:766305/1‑141 (MQ=255)

                                          aataaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGa                                                                                                 <  1:145625/141‑1 (MQ=255)

                                          aataaatCTTAGTCAATCAAATTAATAAGAAAAACAGTCGAACAATGATATTACAATCGCCATTGTCCAACAGCTTTTTATTATGATAAAAAAAAAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGa                                                                                                 <  2:587929/141‑1 (MQ=255)

                                           aggagataaacaattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGat                                                                                                >  2:496441‑M1/98‑141 (MQ=255)

                                           aggagataaacaattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGat                                                                                                >  2:496667‑M1/98‑141 (MQ=255)

                                            taaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGatt                                                                                               >  2:951063/1‑141 (MQ=255)

                                              aatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGattta                                                                                             <  1:345085/141‑1 (MQ=255)

                                              aatCTTAGACAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGAAAAAAAAAAAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGattta                                                                                             <  2:600544/141‑1 (MQ=255)

                                                tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGatttatt                                                                                           <  1:790615/141‑1 (MQ=255)

                                                tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGatttatt                                                                                           >  2:77465/1‑141 (MQ=255)

                                                  ttAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTg                                                                                         <  1:969644/141‑1 (MQ=255)

                                                         atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa                                                                                  >  2:317472/1‑141 (MQ=255)

                                                         atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa                                                                                  <  2:19417/141‑1 (MQ=255)

                                                          tcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc                                                                                 <  2:482591/141‑1 (MQ=255)

                                                           caaGTTACTCAGAAACGCAGGCGCAGAATGAACTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATAAAAAAAAAA‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt                                                                                <  2:368531/141‑1 (MQ=255)

                                                           caaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt                                                                                <  1:486260/141‑1 (MQ=255)

                                                            aaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt                                                                                <  2:118718/141‑1 (MQ=255)

                                                              gTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtata                                                                             <  1:1022168/141‑1 (MQ=255)

                                                              gTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtata                                                                             <  1:686889/141‑1 (MQ=255)

                                                                 aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt                                                                          <  1:750310/141‑1 (MQ=255)

                                                                 aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt                                                                          >  1:875483/1‑141 (MQ=255)

                                                                  aTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAttt                                                                         >  2:248243/1‑141 (MQ=255)

                                                                   tCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTc                                                                        >  2:560674/1‑141 (MQ=255)

                                                                     aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt                                                                      <  2:96273/141‑1 (MQ=255)

                                                                      gAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGATAACCACTATAATTTCTTa                                                                     >  1:230897/1‑141 (MQ=255)

                                                                        aaaGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAt                                                                   >  1:850982/1‑141 (MQ=255)

                                                                         aaGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAtt                                                                  <  1:174981/141‑1 (MQ=255)

                                                                           gCAGTCGAACAATGATTTCACAATCGACATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAg                                                                <  2:802148/141‑1 (MQ=255)

                                                                            cAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAga                                                               >  1:794977/1‑140 (MQ=255)

                                                                              gTCGAACAATGATTTTACAATCGCCATTGTCCAGCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTcc                                                             >  1:562664/1‑141 (MQ=255)

                                                                              gTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTcc                                                             >  1:692325/1‑141 (MQ=255)

                                                                               tCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTccc                                                            >  1:53668/1‑141 (MQ=255)

                                                                                  aaCAATGATGTTACAATCGCCATTGTCAAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCAtt                                                         <  2:21035/141‑1 (MQ=255)

                                                                                      aTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca                                                     <  2:547446/141‑1 (MQ=255)

                                                                                        gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg                                                   >  2:151682/1‑141 (MQ=255)

                                                                                        gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg                                                   >  1:1064955/1‑141 (MQ=255)

                                                                                        gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg                                                   >  1:260647/1‑141 (MQ=255)

                                                                                           tttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAAc                                                >  1:162653/1‑141 (MQ=255)

                                                                                            ttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTAAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACt                                               >  2:1035478/1‑141 (MQ=255)

                                                                                              aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                             >  1:732179/1‑141 (MQ=255)

                                                                                              aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                             <  2:33349/141‑1 (MQ=255)

                                                                                              aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATAAAAAAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                             <  2:1000208/141‑1 (MQ=255)

                                                                                              aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTGCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                             <  1:1082990/141‑1 (MQ=255)

                                                                                                    gCCATTTTCCAACTGCTTTGTATTATGGTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATGAACACGAACTGCATAGGt                                       <  2:1081509/141‑1 (MQ=255)

                                                                                                    gCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGt                                       >  1:454822/1‑141 (MQ=255)

                                                                                                     ccATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTa                                      <  1:1058404/141‑1 (MQ=255)

                                                                                                         tGTCCAACTGCTTTTTATTATGCTTCAATGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCt                                  >  2:485977/1‑141 (MQ=255)

                                                                                                                 tGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAAtata                          <  1:403789/141‑1 (MQ=255)

                                                                                                                   cTTTTTATTATGCATCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGt                        <  2:635918/141‑1 (MQ=255)

                                                                                                                    tttttATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGtt                       >  1:1776/1‑141 (MQ=255)

                                                                                                                    tttttATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGtt                       >  2:555650/1‑141 (MQ=255)

                                                                                                                       ttattaTGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGcc                    >  1:263118/1‑141 (MQ=255)

                                                                                                                       ttattaTGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGcc                    >  2:736828/1‑141 (MQ=255)

                                                                                                                       ttattaTGCATCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAAGCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTCAACATAGTTGcc                    >  2:736964/1‑141 (MQ=255)

                                                                                                                          ttatGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCaac                 <  2:572891/141‑3 (MQ=255)

                                                                                                                          ttatGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATg                 <  1:559973/141‑1 (MQ=255)

                                                                                                                              gCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTgg             <  2:900721/141‑1 (MQ=255)

                                                                                                                              gCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTgg             >  1:755509/1‑141 (MQ=255)

                                                                                                                              gCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTgg             >  1:287158/1‑141 (MQ=255)

                                                                                                                                ttCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCa           <  2:1026463/141‑1 (MQ=255)

                                                                                                                                 tCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCaa          >  2:243520/1‑141 (MQ=255)

                                                                                                                                  cAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAAt         <  1:222863/141‑1 (MQ=255)

                                                                                                                                    aaGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATCAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCACTTg       >  2:1053770/1‑141 (MQ=255)

                                                                                                                                       tCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGttt    >  1:412795/1‑141 (MQ=255)

                                                                                                                                         aaaaaaTCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTAt  >  1:612144/1‑141 (MQ=255)

                                                                                                                                         aaaaaaTCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACAACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTAt  >  2:524298/1‑141 (MQ=255)

TAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTAT  >  CP000730/2252518‑2252795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.