New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2252658 =94 (1.060)5 (0.060) 4/246 NT 5.5% intergenic (+94/+58) luxS/USA300HOU_2124 S‑ribosylhomocysteine lyase/hypothetical membrane protein
?CP000730 2252704 = 82 (0.970)intergenic (+140/+12) luxS/USA300HOU_2124 S‑ribosylhomocysteine lyase/hypothetical membrane protein

AATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATATTAGCT  >  CP000730/2252564‑2252836
                                                                                                                                             |                                                                                                                                    
aatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGattta                                                                                                                                      <  1:345085/141‑1 (MQ=255)
aatCTTAGACAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGAAAAAAAAAAAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGattta                                                                                                                                      <  2:600544/141‑1 (MQ=255)
  tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGatttatt                                                                                                                                    >  2:77465/1‑141 (MQ=255)
  tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGatttatt                                                                                                                                    <  1:790615/141‑1 (MQ=255)
    ttAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTg                                                                                                                                  <  1:969644/141‑1 (MQ=255)
           atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa                                                                                                                           >  2:317472/1‑141 (MQ=255)
           atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa                                                                                                                           <  2:19417/141‑1 (MQ=255)
            tcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc                                                                                                                          <  2:482591/141‑1 (MQ=255)
             caaGTTACTCAGAAACGCAGGCGCAGAATGAACTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATAAAAAAAAAA‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt                                                                                                                         <  2:368531/141‑1 (MQ=255)
             caaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt                                                                                                                         <  1:486260/141‑1 (MQ=255)
              aaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt                                                                                                                         <  2:118718/141‑1 (MQ=255)
                gTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtata                                                                                                                      <  1:686889/141‑1 (MQ=255)
                gTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtata                                                                                                                      <  1:1022168/141‑1 (MQ=255)
                   aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt                                                                                                                   >  1:875483/1‑141 (MQ=255)
                   aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt                                                                                                                   <  1:750310/141‑1 (MQ=255)
                    aTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAttt                                                                                                                  >  2:248243/1‑141 (MQ=255)
                     tCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTc                                                                                                                 >  2:560674/1‑141 (MQ=255)
                       aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt                                                                                                               <  2:96273/141‑1 (MQ=255)
                        gAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGATAACCACTATAATTTCTTa                                                                                                              >  1:230897/1‑141 (MQ=255)
                          aaaGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAt                                                                                                            >  1:850982/1‑141 (MQ=255)
                           aaGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAtt                                                                                                           <  1:174981/141‑1 (MQ=255)
                             gCAGTCGAACAATGATTTCACAATCGACATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAg                                                                                                         <  2:802148/141‑1 (MQ=255)
                              cAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAga                                                                                                        >  1:794977/1‑140 (MQ=255)
                               aGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATGATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTc                                                                                                       >  2:968268/1‑141 (MQ=255)
                                gTCGAACAATGATTTTACAATCGCCATTGTCCAGCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTcc                                                                                                      >  1:562664/1‑141 (MQ=255)
                                gTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTcc                                                                                                      >  1:692325/1‑141 (MQ=255)
                                 tCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTccc                                                                                                     >  1:53668/1‑141 (MQ=255)
                                    aaCAATGATGTTACAATCGCCATTGTCAAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCAtt                                                                                                  <  2:21035/141‑1 (MQ=255)
                                        aTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca                                                                                              <  2:547446/141‑1 (MQ=255)
                                          gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg                                                                                            >  2:151682/1‑141 (MQ=255)
                                          gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg                                                                                            >  1:260647/1‑141 (MQ=255)
                                          gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg                                                                                            >  1:1064955/1‑141 (MQ=255)
                                             tttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAAc                                                                                         >  1:162653/1‑141 (MQ=255)
                                              ttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTAAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACt                                                                                        >  2:1035478/1‑141 (MQ=255)
                                                aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                                                                      <  2:33349/141‑1 (MQ=255)
                                                aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                                                                      >  1:732179/1‑141 (MQ=255)
                                                aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATAAAAAAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                                                                      <  2:1000208/141‑1 (MQ=255)
                                                aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTGCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc                                                                                      <  1:1082990/141‑1 (MQ=255)
                                                   aTCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATa                                                                                   >  1:777951/1‑141 (MQ=255)
                                                      gCCATTTTCCAACTGCTTTGTATTATGGTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATGAACACGAACTGCATAGGt                                                                                <  2:1081509/141‑1 (MQ=255)
                                                      gCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGt                                                                                >  1:454822/1‑141 (MQ=255)
                                                       ccATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTa                                                                               <  1:1058404/141‑1 (MQ=255)
                                                           tGTCCAACTGCTTTTTATTATGCTTCAATGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCt                                                                           >  2:485977/1‑141 (MQ=255)
                                                                   tGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAAtata                                                                   <  1:403789/141‑1 (MQ=255)
                                                                     cTTTTTATTATGCATCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGt                                                                 <  2:635918/141‑1 (MQ=255)
                                                                      tttttATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGtt                                                                >  2:555650/1‑141 (MQ=255)
                                                                      tttttATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGtt                                                                >  1:1776/1‑141 (MQ=255)
                                                                         ttattaTGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGcc                                                             >  2:736828/1‑141 (MQ=255)
                                                                         ttattaTGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGcc                                                             >  1:263118/1‑141 (MQ=255)
                                                                         ttattaTGCATCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAAGCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTCAACATAGTTGcc                                                             >  2:736964/1‑141 (MQ=255)
                                                                            ttatGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCaac                                                          <  2:572891/141‑3 (MQ=255)
                                                                            ttatGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATg                                                          <  1:559973/141‑1 (MQ=255)
                                                                                gCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTgg                                                      >  1:287158/1‑141 (MQ=255)
                                                                                gCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTgg                                                      >  1:755509/1‑141 (MQ=255)
                                                                                gCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTgg                                                      <  2:900721/141‑1 (MQ=255)
                                                                                  ttCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCa                                                    <  2:1026463/141‑1 (MQ=255)
                                                                                   tCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCaa                                                   >  2:243520/1‑141 (MQ=255)
                                                                                    cAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAAt                                                  <  1:222863/141‑1 (MQ=255)
                                                                                      aaGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATCAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCACTTg                                                >  2:1053770/1‑141 (MQ=255)
                                                                                         tCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGttt                                             >  1:412795/1‑141 (MQ=255)
                                                                                           aaaaaaTCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTAt                                           >  1:612144/1‑141 (MQ=255)
                                                                                           aaaaaaTCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACAACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTAt                                           >  2:524298/1‑141 (MQ=255)
                                                                                               AATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTcc                                       >  2:784914‑M1/1‑141 (MQ=255)
                                                                                                 atcggacaaatgttaaagattttactttttcatttgttcgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCt                                      >  2:496667‑M2/45‑141 (MQ=255)
                                                                                                 atcggacaaatgttaaagattttactttttcatttgttcgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCt                                      >  2:496441‑M2/45‑141 (MQ=255)
                                                                                                  tcggacaaatgttaaagattctactttttcatttgttcgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTa                                     >  1:825099‑M2/44‑141 (MQ=255)
                                                                                                  CGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTaa                                    <  1:940875‑M1/141‑1 (MQ=255)
                                                                                                  CGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTaa                                    <  1:819440‑M1/141‑1 (MQ=255)
                                                                                                   cggacaaatgttaaagattttactttttcatttgttcgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTaa                                    >  1:127429‑M2/43‑141 (MQ=255)
                                                                                                   GAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTaaa                                   >  2:174318‑M1/1‑141 (MQ=255)
                                                                                                     aCAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAgg                                 <  2:942657/141‑1 (MQ=255)
                                                                                                         aTG‑AAACAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAAc                             <  1:712055/141‑1 (MQ=255)
                                                                                                         aTG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAAc                             <  1:550123/141‑1 (MQ=255)
                                                                                                         aTG‑AAAAAGTAAAACCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAAc                             >  2:769324/1‑141 (MQ=255)
                                                                                                          tG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACt                            <  1:167248/141‑1 (MQ=255)
                                                                                                          tG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACt                            <  1:854487/141‑1 (MQ=255)
                                                                                                           g‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACtt                           <  1:807145/141‑1 (MQ=255)
                                                                                                           g‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACtt                           <  1:180402/141‑1 (MQ=255)
                                                                                                                aaGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTa                       <  2:287029/141‑1 (MQ=255)
                                                                                                                 aGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTaa                      >  2:965431/1‑141 (MQ=255)
                                                                                                                  gTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAAc                     <  2:766916/141‑1 (MQ=255)
                                                                                                                    aaaaTCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTg                   >  1:137891/1‑141 (MQ=255)
                                                                                                                     aaaTCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGc                  <  2:980938/141‑1 (MQ=255)
                                                                                                                     aaaTCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGc                  >  1:455712/1‑141 (MQ=255)
                                                                                                                       aTCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCa                <  1:316176/141‑1 (MQ=255)
                                                                                                                           ttAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTAGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCAtata            <  2:789152/141‑1 (MQ=255)
                                                                                                                            tAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAg           <  1:1073975/141‑1 (MQ=255)
                                                                                                                             aaCATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCTATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGa          >  2:179378/1‑141 (MQ=255)
                                                                                                                             aaCATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGa          <  1:823671/141‑1 (MQ=255)
                                                                                                                             aaCATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGa          <  1:509666/141‑1 (MQ=255)
                                                                                                                             aaCATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGa          <  1:644461/141‑1 (MQ=255)
                                                                                                                             aaCATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGCTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGa          <  1:758880/141‑1 (MQ=255)
                                                                                                                             aaCATTTGTCCGATTCATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGa          <  1:901745/141‑1 (MQ=255)
                                                                                                                              tcatttgttcgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGat         >  1:92016‑M2/16‑141 (MQ=255)
                                                                                                                                aTTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGatat       >  2:920273/1‑141 (MQ=255)
                                                                                                                                 tttGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATAtt      <  1:1025417/141‑1 (MQ=255)
                                                                                                                                    gTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATATTAGc   <  2:120121/141‑1 (MQ=255)
                                                                                                                                     tCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATATTAGCt  <  1:1035818/141‑1 (MQ=255)
                                                                                                                                     tCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATATTAGCt  <  2:777951/141‑1 (MQ=255)
                                                                                                                                     tCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTCGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATATTAGCt  <  1:550971/141‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                    
AATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATG‑AAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGATATTAGCT  >  CP000730/2252564‑2252836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.