New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 885389	59 (0.900)	4 (0.070)	4/232	NT	6.7%	intergenic (+18/+55)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter
	?	CP000730	= 885408	58 (0.990)					intergenic (+37/+36)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter

TTAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTT  >  CP000730/885249‑885528                                                                                                                                             |                                                                                                                                             ttAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                                                                              >  1:488325‑M1/1‑141 (MQ=255) ttAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                                                                              <  1:683516‑M1/141‑1 (MQ=255)         ttGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GAcaca                                                                                                                                     <  2:68701/141‑1 (MQ=255)          tGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACaa                                                                                                                                    >  1:343820/1‑141 (MQ=255)           gCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACaaa                                                                                                                                   >  2:80037/1‑140 (MQ=255)           gCCTTAAACTAGAGGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAg                                                                                                                                   <  2:708367/141‑1 (MQ=255)            ccTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGt                                                                                                                                  <  2:547429/141‑1 (MQ=255)            ccTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGt                                                                                                                                  <  1:618898/141‑1 (MQ=255)               tAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATg                                                                                                                               >  1:532399/1‑141 (MQ=255)                     aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTt                                                                                                                         <  2:394909‑M2/141‑2 (MQ=255)                      ggtgaAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtg                                                                                                                        <  1:333971‑M2/139‑3 (MQ=255)                           aGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataa                                                                                                                   >  2:352270‑M2/1‑134 (MQ=255)                            gCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataac                                                                                                                  >  2:455794‑M2/1‑133 (MQ=255)                            gCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataac                                                                                                                  >  2:481881‑M2/1‑133 (MQ=255)                             cATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatacttgtgtctatgtataacg                                                                                                                  <  2:129616‑M1/141‑29 (MQ=255)                             cATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacg                                                                                                                 <  1:264738‑M2/141‑10 (MQ=255)                                tAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgctt                                                                                                              >  2:605912‑M2/1‑129 (MQ=255)                                  aaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCtttt                                                                                                            <  2:456702/141‑1 (MQ=255)                                  aaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCtttt                                                                                                            >  1:502193/1‑141 (MQ=255)                                    gCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaa                                                                                                          >  1:134774/1‑141 (MQ=255)                                    gCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaa                                                                                                          >  1:266155/1‑141 (MQ=255)                                     cATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaaa                                                                                                         <  2:343820/141‑1 (MQ=255)                                      ataataTCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaaaa                                                                                                        <  2:21760/141‑1 (MQ=255)                                          tatCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACa                                                                                                    >  1:18027/1‑141 (MQ=255)                                          tatCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATgtataacgctttatttattat                                                                                                     >  2:130725‑M2/1‑120 (MQ=255)                                                 aaTTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACAt                                                                                             <  2:387964/141‑1 (MQ=255)                                                    tGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAAc                                                                                          <  1:369103/141‑1 (MQ=255)                                                    tGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAAc                                                                                          >  1:649477/1‑141 (MQ=255)                                                      tAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGc                                                                                        <  1:455548/141‑1 (MQ=255)                                                       aaTATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCt                                                                                       <  1:163793/141‑1 (MQ=255)                                                       aaTATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATGTATTATAAATATATCGTGATACATA‑TACACAAGGATGTCTTTTGTATAACGCTTGTAAAATACAACTACATAACGCt                                                                                       >  1:273127/1‑141 (MQ=255)                                                       aaTATCCTGAAATGTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGAATGTATTTTGTATAACGCTCTTAAAATACAACTACATAACACt                                                                                       >  2:302912/1‑141 (MQ=255)                                                           tCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAg                                                                                   <  2:453503/141‑1 (MQ=255)                                                                   tttGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGaataataa                                                                           <  1:90194/141‑1 (MQ=255)                                                                    ttGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTAAAACGCTTTTAAAATACAACCACATAACGCTTTAGaataatact                                                                          >  2:654180/1‑139 (MQ=255)                                                                      gAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTg                                                                        <  2:748735/141‑1 (MQ=255)                                                                      gAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTg                                                                        >  1:433613/1‑141 (MQ=255)                                                                       aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataa                                                                                                                   <  2:710446‑M2/97‑8 (MQ=255)                                                                       aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataa                                                                                                                   >  1:710446‑M2/1‑90 (MQ=255)                                                                        atatGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGaa                                                                      <  1:626900/141‑1 (MQ=255)                                                                        atatGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGaa                                                                      <  1:143418/141‑1 (MQ=255)                                                                          atGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATa                                                                    <  1:156352/141‑1 (MQ=255)                                                                            gACAATGGAACCTTTAAATTTGTTGAGTTAATCGATCCAAATTCATAATAAATAAAGCGCTATACATA‑GACACAAGTATGACTCTTGTATAGCGCTTTTAAAATACGACGACATAACGCTTTAGAATACtaatataatatt                                                                  >  2:601563/1‑139 (MQ=255)                                                                             aCAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGt                                                                 >  1:573359/1‑141 (MQ=255)                                                                               aaTGGAACATTTAAATTTGTTGAGTTATTTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTCTAGAATAATAATTGACTAAGttt                                                               >  2:280998/1‑141 (MQ=255)                                                                                  ggAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGtttttt                                                            >  2:154498/1‑140 (MQ=255)                                                                                   gAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGt                                                           >  1:28980/1‑141 (MQ=255)                                                                                     aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACTACTACATAACGCTTTAGAATAATCATTGAATAAGTTTTTGTaa                                                         >  2:327034/1‑141 (MQ=255)                                                                                     aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTaa                                                         >  1:68929/1‑141 (MQ=255)                                                                                      cATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAat                                                        <  1:783840/141‑1 (MQ=255)                                                                                              tttGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatacttgtgtct                                                                                                                            <  1:426015‑M1/66‑19 (MQ=255)                                                                                              tttGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatacttgtgtct                                                                                                                            >  2:426015‑M1/1‑48 (MQ=255)                                                                                                tgttgAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCagag                                              >  1:258889/1‑141 (MQ=255)                                                                                                    gAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGcaac                                          >  2:686838/1‑141 (MQ=255)                                                                                                     aGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTGTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGcaaca                                         <  2:302726/141‑1 (MQ=255)                                                                                                      gTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGcaacaa                                        >  1:473902/1‑141 (MQ=255)                                                                                                           ttGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACaataata                                   >  1:460285/1‑141 (MQ=255)                                                                                                             gATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACaataataat                                 >  1:250457/1‑141 (MQ=255)                                                                                                              aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                >  2:89494/1‑141 (MQ=255)                                                                                                              aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                >  1:386742/1‑141 (MQ=255)                                                                                                                 cAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAattatt                             <  1:204384/141‑1 (MQ=255)                                                                                                                       tataATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCtt                       <  1:519525/141‑1 (MQ=255)                                                                                                                        ataataAATAAAGCGTTATACtagacacaagtatgtcttttgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgata                        >  2:130725‑M1/1‑22 (MQ=255)                                                                                                                        ataataAATAAAGCGGTATAAATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTATAATATTAATTGAATAAGAATTTGTAATATCATCAGGGCAACAATAATAATTATTATGCTTg                      >  1:251667/1‑141 (MQ=255)                                                                                                                         taataaATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGa                     <  2:582268/141‑1 (MQ=255)                                                                                                                         taataaATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGa                     <  2:281562/141‑1 (MQ=255)                                                                                                                           ataaataaAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGata                   <  1:705822/141‑1 (MQ=255)                                                                                                                                taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa              <  2:576255/141‑1 (MQ=255)                                                                                                                                taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa              <  1:163921/141‑1 (MQ=255)                                                                                                                                taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa              <  2:736194/141‑1 (MQ=255)                                                                                                                                  aaGCGTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgcttta             >  2:605912‑M1/1‑12 (MQ=255)                                                                                                                                   aGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTAttt           >  1:120680/1‑140 (MQ=255)                                                                                                                                   aGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTg           >  1:120530/1‑141 (MQ=255)                                                                                                                                   aGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTg           >  1:518234/1‑141 (MQ=255)                                                                                                                                     cGTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatg          <  1:264738‑M1/141‑133 (MQ=255)                                                                                                                                     cGTTATACATA‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatg         <  2:129616‑M2/141‑114 (MQ=255)                                                                                                                                     cGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGat         >  1:625409/1‑141 (MQ=255)                                                                                                                                      gTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgc         >  2:481881‑M1/1‑8 (MQ=255)                                                                                                                                      gTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgc         >  2:455794‑M1/1‑8 (MQ=255)                                                                                                                                      gTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGatt        <  1:269523/141‑1 (MQ=255)                                                                                                                                       ttATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgct        >  2:352270‑M1/1‑7 (MQ=255)                                                                                                                                       ttATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatatt                                                    <  2:710446‑M1/97‑91 (MQ=255)                                                                                                                                       ttATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatatt                                                    >  1:710446‑M1/1‑7 (MQ=255)                                                                                                                                          taCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTg    >  2:411040/1‑141 (MQ=255)                                                                                                                                           aCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGt   >  1:496242/1‑141 (MQ=255)                                                                                                                                            cAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcacc   <  1:333971‑M1/141‑140 (MQ=255)                                                                                                                                            cATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATAGTTTATTGATTATTGtt  >  2:531122/1‑141 (MQ=255)                                                                                                                                             aaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatct  <  2:394909‑M1/141‑141 (MQ=255)                                                                                                                                             |                                                                                                                                             TTAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTT  >  CP000730/885249‑885528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.