New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 885389	59 (0.900)	4 (0.070)	4/232	NT	6.7%	intergenic (+18/+55)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter
	?	CP000730	= 885408	58 (0.990)					intergenic (+37/+36)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter

AGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGT  >  CP000730/885269‑885542                                                                                                                                             |                                                                                                                                       aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTt                                                                                                                                       <  2:394909‑M2/141‑2 (MQ=255)  ggtgaAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtg                                                                                                                                      <  1:333971‑M2/139‑3 (MQ=255)       aGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataa                                                                                                                                 >  2:352270‑M2/1‑134 (MQ=255)        gCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataac                                                                                                                                >  2:455794‑M2/1‑133 (MQ=255)        gCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataac                                                                                                                                >  2:481881‑M2/1‑133 (MQ=255)         cATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacg                                                                                                                               <  1:264738‑M2/141‑10 (MQ=255)            tAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgctt                                                                                                                            >  2:605912‑M2/1‑129 (MQ=255)              aaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCtttt                                                                                                                          >  1:502193/1‑141 (MQ=255)              aaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCtttt                                                                                                                          <  2:456702/141‑1 (MQ=255)                gCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaa                                                                                                                        >  1:134774/1‑141 (MQ=255)                gCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaa                                                                                                                        >  1:266155/1‑141 (MQ=255)                 cATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaaa                                                                                                                       <  2:343820/141‑1 (MQ=255)                  ataataTCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTaaaa                                                                                                                      <  2:21760/141‑1 (MQ=255)                      tatCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACa                                                                                                                  >  1:18027/1‑141 (MQ=255)                      tatCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATgtataacgctttatttattat                                                                                                                   >  2:130725‑M2/1‑120 (MQ=255)                             aaTTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACAt                                                                                                           <  2:387964/141‑1 (MQ=255)                                tGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAAc                                                                                                        >  1:649477/1‑141 (MQ=255)                                tGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAAc                                                                                                        <  1:369103/141‑1 (MQ=255)                                  tAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGc                                                                                                      <  1:455548/141‑1 (MQ=255)                                   aaTATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCt                                                                                                     <  1:163793/141‑1 (MQ=255)                                   aaTATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATGTATTATAAATATATCGTGATACATA‑TACACAAGGATGTCTTTTGTATAACGCTTGTAAAATACAACTACATAACGCt                                                                                                     >  1:273127/1‑141 (MQ=255)                                   aaTATCCTGAAATGTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGAATGTATTTTGTATAACGCTCTTAAAATACAACTACATAACACt                                                                                                     >  2:302912/1‑141 (MQ=255)                                       tCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAg                                                                                                 <  2:453503/141‑1 (MQ=255)                                               tttGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGaataataa                                                                                         <  1:90194/141‑1 (MQ=255)                                                ttGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTAAAACGCTTTTAAAATACAACCACATAACGCTTTAGaataatact                                                                                        >  2:654180/1‑139 (MQ=255)                                                  gAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTg                                                                                      <  2:748735/141‑1 (MQ=255)                                                  gAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTg                                                                                      >  1:433613/1‑141 (MQ=255)                                                   aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataa                                                                                                                                 >  1:710446‑M2/1‑90 (MQ=255)                                                   aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataa                                                                                                                                 <  2:710446‑M2/97‑8 (MQ=255)                                                    atatGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGaa                                                                                    <  1:143418/141‑1 (MQ=255)                                                    atatGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGaa                                                                                    <  1:626900/141‑1 (MQ=255)                                                      atGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATa                                                                                  <  1:156352/141‑1 (MQ=255)                                                        gACAATGGAACCTTTAAATTTGTTGAGTTAATCGATCCAAATTCATAATAAATAAAGCGCTATACATA‑GACACAAGTATGACTCTTGTATAGCGCTTTTAAAATACGACGACATAACGCTTTAGAATACtaatataatatt                                                                                >  2:601563/1‑139 (MQ=255)                                                         aCAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGt                                                                               >  1:573359/1‑141 (MQ=255)                                                           aaTGGAACATTTAAATTTGTTGAGTTATTTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTCTAGAATAATAATTGACTAAGttt                                                                             >  2:280998/1‑141 (MQ=255)                                                              ggAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGtttttt                                                                          >  2:154498/1‑140 (MQ=255)                                                               gAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGt                                                                         >  1:28980/1‑141 (MQ=255)                                                                 aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACTACTACATAACGCTTTAGAATAATCATTGAATAAGTTTTTGTaa                                                                       >  2:327034/1‑141 (MQ=255)                                                                 aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTaa                                                                       >  1:68929/1‑141 (MQ=255)                                                                  cATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAat                                                                      <  1:783840/141‑1 (MQ=255)                                                                            tgttgAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCagag                                                            >  1:258889/1‑141 (MQ=255)                                                                                gAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGcaac                                                        >  2:686838/1‑141 (MQ=255)                                                                                 aGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTGTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGcaaca                                                       <  2:302726/141‑1 (MQ=255)                                                                                  gTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGcaacaa                                                      >  1:473902/1‑141 (MQ=255)                                                                                       ttGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACaataata                                                 >  1:460285/1‑141 (MQ=255)                                                                                         gATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACaataataat                                               >  1:250457/1‑141 (MQ=255)                                                                                          aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                              >  1:386742/1‑141 (MQ=255)                                                                                          aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                              >  2:89494/1‑141 (MQ=255)                                                                                             cAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAattatt                                           <  1:204384/141‑1 (MQ=255)                                                                                                   tataATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCtt                                     <  1:519525/141‑1 (MQ=255)                                                                                                    ataataAATAAAGCGGTATAAATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTATAATATTAATTGAATAAGAATTTGTAATATCATCAGGGCAACAATAATAATTATTATGCTTg                                    >  1:251667/1‑141 (MQ=255)                                                                                                     taataaATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGa                                   <  2:582268/141‑1 (MQ=255)                                                                                                     taataaATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGa                                   <  2:281562/141‑1 (MQ=255)                                                                                                       ataaataaAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGata                                 <  1:705822/141‑1 (MQ=255)                                                                                                            taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa                            <  2:736194/141‑1 (MQ=255)                                                                                                            taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa                            <  2:576255/141‑1 (MQ=255)                                                                                                            taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa                            <  1:163921/141‑1 (MQ=255)                                                                                                               aGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTAttt                         >  1:120680/1‑140 (MQ=255)                                                                                                               aGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTg                         >  1:120530/1‑141 (MQ=255)                                                                                                               aGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTg                         >  1:518234/1‑141 (MQ=255)                                                                                                                 cGTTATACATA‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatg                       <  2:129616‑M2/141‑114 (MQ=255)                                                                                                                 cGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGat                       >  1:625409/1‑141 (MQ=255)                                                                                                                  gTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGatt                      <  1:269523/141‑1 (MQ=255)                                                                                                                      taCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTg                  >  2:411040/1‑141 (MQ=255)                                                                                                                       aCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGt                 >  1:496242/1‑141 (MQ=255)                                                                                                                        cATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATAGTTTATTGATTATTGtt                >  2:531122/1‑141 (MQ=255)                                                                                                                          tA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATATAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTAGTGATTATTGTtaa              <  1:580559/141‑1 (MQ=255)                                                                                                                          tA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTtaa              >  2:335346/1‑141 (MQ=255)                                                                                                                           a‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaa                                                                                        <  1:426015‑M2/66‑49 (MQ=255)                                                                                                                           a‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaa                                                                                        >  2:426015‑M2/1‑18 (MQ=255)                                                                                                                                   aGTATGTCTTTTGTATAACGCTTTTATAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTc      <  1:702708/141‑1 (MQ=255)                                                                                                                                   aGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAAttttt      >  1:668369/1‑140 (MQ=255)                                                                                                                                   aGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTc      <  1:646390/141‑1 (MQ=255)                                                                                                                                   aGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTc      >  2:67616/1‑141 (MQ=255)                                                                                                                                     tATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCg    >  2:127702/1‑141 (MQ=255)                                                                                                                                      aTGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCgg   >  2:217265/1‑141 (MQ=255)                                                                                                                                       tGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGt  <  1:89494/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                       AGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGT  >  CP000730/885269‑885542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.