New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3739543109 (0.970)4 (0.040) 4/286 11.8 3.8% intergenic (+16/‑162) malS/avtA alpha‑amylase/valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase
?NC_000913 = 3739556 103 (0.980)intergenic (+29/‑149) malS/avtA alpha‑amylase/valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase
Rejected: Position hash score below cutoff.

Only 100 of 109 total aligned reads displayed.

GGATGTTAGCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTACCC  >  NC_000913/3739347‑3739738
                                                                                                                                                                                                    |                                                                                                                                                                                                   
ggATGTTAGCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTc                                                                                                                                                                                                  >  4:951655/1‑200 (MQ=255)
        gCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTAc                                                                                                                                                                                          >  4:71524/1‑200 (MQ=255)
        gCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTAc                                                                                                                                                                                          <  4:361209/200‑1 (MQ=255)
           gTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACATc                                                                                                                                                                                       >  4:643331/1‑200 (MQ=255)
                                    cTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                                                                              <  4:285909/200‑1 (MQ=255)
                                     tGGCAGAAAAGCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATg                                                                                                                                                             <  4:49587/200‑1 (MQ=255)
                                      ggCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGt                                                                                                                                                            >  4:402581/1‑200 (MQ=255)
                                            aaaTCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGccc                                                                                                                                                      <  4:559726/200‑1 (MQ=255)
                                                 aGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCAAGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                 >  4:747989/1‑200 (MQ=255)
                                                      gTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                            >  4:692371/1‑200 (MQ=255)
                                                      gTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCCGGGCAGGGCAACAGTAACTTTTACGGCTTCCCGTTCGTCa                                                                                                                                                                                              >  2:443853/1‑150 (MQ=255)
                                                           gcgcCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAg                                                                                                                                       <  4:306912/200‑1 (MQ=255)
                                                             gcccgacAGCGCGCAATTGGCGCGGGCAAACAAAGGACCCTTTTGCTGACGCGGGGCTACGGATTTGTACGTGGGCATCGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGAAGAAGTAACTTTTCCGGCTTCCAGTTCGTCAGAACCTc                                                                                                                                                                                       <  2:773619/150‑1 (MQ=255)
                                                                cgccATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACAGCTTTGTTCGTGAGAATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCggg                                                                                                                                                                                    <  2:478813/150‑1 (MQ=255)
                                                                 gccATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGt                                                                                                                                                                                            <  1:115008/141‑1 (MQ=255)
                                                                   cATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTAc                                                                                                                                                                                          <  1:394335/141‑1 (MQ=255)
                                                                   cATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTAc                                                                                                                                                                                          <  1:520621/141‑1 (MQ=255)
                                                                     tCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCg                                                                                                                                                                                                 >  3:562601/1‑132 (MQ=255)
                                                                     tCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                             <  4:91515/200‑1 (MQ=255)
                                                                     tCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                             >  4:287854/1‑200 (MQ=255)
                                                                      cccGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAgccg                                                                                                                                                                              >  2:951883/1‑150 (MQ=255)
                                                                          cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAATAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCaa                                                                                                                                                                          >  2:544526/1‑150 (MQ=255)
                                                                          cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTTACTTTTCCGTGTTACAGTTCGTTAGTatcccgtga                                                                                                                                                                                   >  1:550956/1‑133 (MQ=255)
                                                                          cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCaa                                                                                                                                                                          >  2:785058/1‑150 (MQ=255)
                                                                          cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTc                                                                                                                        <  4:276125/200‑1 (MQ=255)
                                                                             ttGGCGCGGGCAAACAATCGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATAGCGACGATAAAGTGCTGGTCGTCTGGGTAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCAct                                                                                                                     <  4:101852/200‑1 (MQ=255)
                                                                                 cgcgGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                                                                 <  4:228042/200‑1 (MQ=255)
                                                                                   cgGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATaa                                                                                                                                                                 <  2:740230/150‑1 (MQ=255)
                                                                                    gggCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                              <  4:394756/200‑1 (MQ=255)
                                                                                    gggCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                              <  4:830939/200‑1 (MQ=255)
                                                                                      gCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                                                                              <  2:671552/150‑1 (MQ=255)
                                                                                      gCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTGGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                                                                              <  2:616103/150‑1 (MQ=255)
                                                                                       caaacaaaCGACACTTTTGCTGAAGAAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATg                                                                                                                                                             <  2:563830/150‑1 (MQ=255)
                                                                                          acaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCa                                                                                                                                                          >  2:779775/1‑150 (MQ=255)
                                                                                             aacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTACTGGTCGTCTGGTCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGcc                                                                                                                                                       >  2:78621/1‑150 (MQ=255)
                                                                                              acGACACTTTTGATGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGATGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAAcc                                                                                                                                                                        <  3:302577/132‑1 (MQ=255)
                                                                                                  cacTTTTGCTGAAGACGGGCTACGGCTTTGTTCGTGATCATGGCGACGATAATTTGCTGGTTGTATGGGCAGGGCAACAGTACCTTTTCCGACTTCCCGTTCGTAAGGATCTCGGGAAGCCCCTTACCACGAAAAAATGCCAGCCCTAAt                                                                                                                                                  >  2:605972/1‑150 (MQ=255)
                                                                                                   acTTTTGCTGAGGCAGGGCTACGGCATTGTTCGTGAGCATGGCGGCGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGGTAAAGCACCGCTCACTCTTCAACAGACCGATTTGCAcc                                                                                               <  4:771785/200‑1 (MQ=255)
                                                                                                   acTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                 <  2:71521/150‑1 (MQ=255)
                                                                                                   acTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGGGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                 <  2:406485/150‑1 (MQ=255)
                                                                                                    cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATa                                                                                                                                                                  >  3:446122/1‑132 (MQ=255)
                                                                                                    cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCa                                                                                                                                                >  2:229582/1‑150 (MQ=255)
                                                                                                    cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGc                                                                                                                                              <  4:229592/152‑1 (MQ=255)
                                                                                                        tGCTGGGGCAGGGCTACGGCTTTGGTCGTGAGCATGGCGACGATAGAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAGGCCGCCAACCAGGATAAAAt                                                                                                                                                              <  3:496690/132‑1 (MQ=255)
                                                                                                            gAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                 <  1:395471/141‑1 (MQ=255)
                                                                                                                  gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGtt                                                                                                                                           >  1:242003/1‑141 (MQ=255)
                                                                                                                  gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGtt                                                                                                                                           >  1:421307/1‑141 (MQ=255)
                                                                                                                   ggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                               <  4:467478/200‑1 (MQ=255)
                                                                                                                   ggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                               <  4:829501/200‑1 (MQ=255)
                                                                                                                    gCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGc                                                                                                                                         >  1:420177/1‑141 (MQ=255)
                                                                                                                    gCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAg                                                                                                                                >  2:347575/1‑150 (MQ=255)
                                                                                                                     cTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                 <  3:54311/132‑1 (MQ=255)
                                                                                                                     cTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGc                                                                                                                               <  2:8507/150‑1 (MQ=255)
                                                                                                                       aCGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                             <  2:935190/150‑1 (MQ=255)
                                                                                                                       aCGGCTTTGTTCGGGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                             <  2:935680/150‑1 (MQ=255)
                                                                                                                          gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGCTAAAATGCCAGCCCTAATCAGCGTTGCAGGATa                                                                                                                                   >  1:115116/1‑141 (MQ=255)
                                                                                                                          gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                            >  3:451348/1‑132 (MQ=255)
                                                                                                                          gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                            >  3:408676/1‑132 (MQ=255)
                                                                                                                          gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGc                                                                                                                          >  2:562288/1‑150 (MQ=255)
                                                                                                                               gTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCa                                                                                                                              >  1:11671/1‑141 (MQ=255)
                                                                                                                               gTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCa                                                                                                                              >  1:50557/1‑141 (MQ=255)
                                                                                                                                ttCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                             >  1:218588/1‑141 (MQ=255)
                                                                                                                                ttCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttc                                                                  <  4:627143/200‑1 (MQ=255)
                                                                                                                                  cGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGAt                                                                                                                                    <  3:334458/132‑1 (MQ=255)
                                                                                                                                      aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                              <  2:125669/150‑1 (MQ=255)
                                                                                                                                      aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                              <  2:951625/150‑1 (MQ=255)
                                                                                                                                      aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAAAAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCATCGCTCACTCTTCAAc                                                                                                              <  2:818063/150‑1 (MQ=255)
                                                                                                                                      aGCATGGCGACGATAAAGGGCTGGTCGTCTGGGCAGGGCAACAGTAACTTGTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                              <  2:544042/150‑1 (MQ=255)
                                                                                                                                       gcgtGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGAAACAGTAACTTTTCCGGCTTCACGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGc                                                                                                                               <  3:721425/129‑1 (MQ=255)
                                                                                                                                        cATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTAc                                                          <  4:649258/200‑1 (MQ=255)
                                                                                                                                             cgacgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGt                                                     <  4:537718/200‑1 (MQ=255)
                                                                                                                                               acgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTc                                                   >  4:51764/1‑200 (MQ=255)
                                                                                                                                                  aTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGCTAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGc                                                                                                  >  2:597102/1‑150 (MQ=255)
                                                                                                                                                  aTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGa                                                                                                           >  1:14538/1‑141 (MQ=255)
                                                                                                                                                  aTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCGTCCCGTTCGTCAGCACCTCGGGAAGCCGCCAACCAGGATAAATTCTCAGCCCTAATCAGCGTTGCAGTCTAAAGCACCGCTCActc                                                                                                                    >  3:635966/1‑132 (MQ=255)
                                                                                                                                                  aTAAAGTGCGGGTCGTCGGGGCAGGGCAACAGTAACGTTTCCGGCTTCCCGTTCGTCAGTACCGCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCaa                                                                                        <  4:597154/160‑1 (MQ=255)
                                                                                                                                                       gTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCAcccc                                                                                             >  2:5423/1‑150 (MQ=255)
                                                                                                                                                        tGCTGGTCGGCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                              <  3:546337/132‑1 (MQ=255)
                                                                                                                                                          cTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATcc                                        <  4:55330/200‑1 (MQ=255)
                                                                                                                                                                    gggcagggcaACAGTAACTTTTCCGGCTTCACGTACGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGc                                                                                                  <  3:319962/132‑1 (MQ=255)
                                                                                                                                                                     ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACAt                             <  4:109407/200‑1 (MQ=255)
                                                                                                                                                                     ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACAt                             <  4:757770/200‑1 (MQ=255)
                                                                                                                                                                         gggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGt                                                                                    <  1:568604/141‑1 (MQ=255)
                                                                                                                                                                         gggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTAtt                                                                           >  2:643881/1‑150 (MQ=255)
                                                                                                                                                                          ggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTg                                                                          <  2:420590/150‑1 (MQ=255)
                                                                                                                                                                           gcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAg                                                                                  <  1:79701/141‑1 (MQ=255)
                                                                                                                                                                              aCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCaa                                                                                        >  3:390894/1‑132 (MQ=255)
                                                                                                                                                                              aCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                               >  1:426116/1‑141 (MQ=255)
                                                                                                                                                                              aCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCttt                    >  4:700721/1‑200 (MQ=255)
                                                                                                                                                                                  tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACTGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttc                                                                  <  2:221175/150‑1 (MQ=255)
                                                                                                                                                                                  tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGt                                                                                    <  3:158754/132‑1 (MQ=255)
                                                                                                                                                                                  tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTgg                <  4:647901/200‑1 (MQ=255)
                                                                                                                                                                                   aaCTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTg                                                                          >  1:19674/1‑141 (MQ=255)
                                                                                                                                                                                     gttttCCGGCTTCCCGTTCAGCAGTACCACGCGAAGCCGCCGACCAAGCTAAAATATCAGCCCTAATCAGCGTTGCAGGATAAATCACACCCCCCTCTTCATCATTCCCACTCGCACCCCaccccatttcac                                                                                 >  3:380282/2‑121 (MQ=255)
                                                                                                                                                                                     cTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGc                                                                                 >  3:158561/1‑132 (MQ=255)
                                                                                                                                                                                      ttttCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTg                                                              <  2:747931/150‑1 (MQ=255)
                                                                                                                                                                                            ggCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACag                                                        <  2:551787/150‑1 (MQ=255)
                                                                                                                                                                                                tCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTAccc  >  4:559299/1‑200 (MQ=255)
                                                                                                                                                                                                tCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTAccc  <  4:552079/200‑1 (MQ=255)
                                                                                                                                                                                                tCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTAccc  <  4:931285/200‑1 (MQ=255)
                                                                                                                                                                                                    |                                                                                                                                                                                                   
GGATGTTAGCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTACCC  >  NC_000913/3739347‑3739738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.