BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3739543	109 (0.970)	4 (0.040)	4/286	11.8	3.8%	intergenic (+16/‑162)	malS/avtA	alpha‑amylase/valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase
*	?	NC_000913	= 3739556	103 (0.980)	4 (0.040)	4/286	11.8	3.8%	intergenic (+29/‑149)	malS/avtA	alpha‑amylase/valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase
Rejected: Position hash score below cutoff.

Only 100 of 108 total aligned reads displayed.

GTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTACCCGCCACTCCGGCAT  >  NC_000913/3739358‑3739751

gTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACATc                                                                                                                                                                                                    >  4:643331/1‑200 (MQ=255)

  aaaTCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCgg                                                                                                                                                                                                  <  4:17903/200‑1 (MQ=255)

                         cTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                                                                                           <  4:285909/200‑1 (MQ=255)

                          tGGCAGAAAAGCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATg                                                                                                                                                                          <  4:49587/200‑1 (MQ=255)

                           ggCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGt                                                                                                                                                                         >  4:402581/1‑200 (MQ=255)

                                 aaaTCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGccc                                                                                                                                                                   <  4:559726/200‑1 (MQ=255)

                                      aGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCAAGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                              >  4:747989/1‑200 (MQ=255)

                                           gTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                                         >  4:692371/1‑200 (MQ=255)

                                                gcgcCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAg                                                                                                                                                    <  4:306912/200‑1 (MQ=255)

                                                  gcccgacAGCGCGCAATTGGCGCGGGCAAACAAAGGACCCTTTTGCTGACGCGGGGCTACGGATTTGTACGTGGGCATCGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGAAGAAGTAACTTTTCCGGCTTCCAGTTCGTCAGAACCTc                                                                                                                                                                                                    <  2:773619/150‑1 (MQ=255)

                                                     cgccATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACAGCTTTGTTCGTGAGAATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCggg                                                                                                                                                                                                 <  2:478813/150‑1 (MQ=255)

                                                          tCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                                          >  4:287854/1‑200 (MQ=255)

                                                          tCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                                          <  4:91515/200‑1 (MQ=255)

                                                               cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAATAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCaa                                                                                                                                                                                       >  2:544526/1‑150 (MQ=255)

                                                               cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCaa                                                                                                                                                                                       >  2:785058/1‑150 (MQ=255)

                                                               cAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTc                                                                                                                                     <  4:276125/200‑1 (MQ=255)

                                                                  ttGGCGCGGGCAAACAATCGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATAGCGACGATAAAGTGCTGGTCGTCTGGGTAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCAct                                                                                                                                  <  4:101852/200‑1 (MQ=255)

                                                                      cgcgGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                                                                              <  4:228042/200‑1 (MQ=255)

                                                                         gggCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                                           <  4:830939/200‑1 (MQ=255)

                                                                           gCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                                                                                           <  2:671552/150‑1 (MQ=255)

                                                                           gCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTGGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                                                                                           <  2:616103/150‑1 (MQ=255)

                                                                            caaacaaaCGACACTTTTGCTGAAGAAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATg                                                                                                                                                                          <  2:563830/150‑1 (MQ=255)

                                                                               acaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCa                                                                                                                                                                       >  2:779775/1‑150 (MQ=255)

                                                                                  aacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTACTGGTCGTCTGGTCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGcc                                                                                                                                                                    >  2:78621/1‑150 (MQ=255)

                                                                                   acGACACTTTTGATGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGATGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAAcc                                                                                                                                                                                     <  3:302577/132‑1 (MQ=255)

                                                                                       cacTTTTGCTGAAGACGGGCTACGGCTTTGTTCGTGATCATGGCGACGATAATTTGCTGGTTGTATGGGCAGGGCAACAGTACCTTTTCCGACTTCCCGTTCGTAAGGATCTCGGGAAGCCCCTTACCACGAAAAAATGCCAGCCCTAAt                                                                                                                                                               >  2:605972/1‑150 (MQ=255)

                                                                                        acTTTTGCTGAGGCAGGGCTACGGCATTGTTCGTGAGCATGGCGGCGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGGTAAAGCACCGCTCACTCTTCAACAGACCGATTTGCAcc                                                                                                            <  4:771785/200‑1 (MQ=255)

                                                                                        acTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                              <  2:71521/150‑1 (MQ=255)

                                                                                        acTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGGGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                              <  2:406485/150‑1 (MQ=255)

                                                                                         cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATa                                                                                                                                                                               >  3:446122/1‑132 (MQ=255)

                                                                                         cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCa                                                                                                                                                             >  2:229582/1‑150 (MQ=255)

                                                                                         cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGc                                                                                                                                                           <  4:229592/152‑1 (MQ=255)

                                                                                             tGCTGGGGCAGGGCTACGGCTTTGGTCGTGAGCATGGCGACGATAGAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAGGCCGCCAACCAGGATAAAAt                                                                                                                                                                           <  3:496690/132‑1 (MQ=255)

                                                                                             tGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                                         <  2:623662/150‑1 (MQ=255)

                                                                                                 gAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                                                                              <  1:395471/141‑1 (MQ=255)

                                                                                                    gCAGGGCTACGGCTTTGTTCGGGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGcc                                                                                                                                                                    <  3:404502/132‑1 (MQ=255)

                                                                                                       gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGtt                                                                                                                                                        >  1:421307/1‑141 (MQ=255)

                                                                                                       gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGtt                                                                                                                                                        >  1:242003/1‑141 (MQ=255)

                                                                                                       gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCg                                                                                             >  4:508906/1‑200 (MQ=255)

                                                                                                        ggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                                            <  4:829501/200‑1 (MQ=255)

                                                                                                        ggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                                            <  4:467478/200‑1 (MQ=255)

                                                                                                         gCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGc                                                                                                                                                      >  1:420177/1‑141 (MQ=255)

                                                                                                         gCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAg                                                                                                                                             >  2:347575/1‑150 (MQ=255)

                                                                                                          cTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGc                                                                                                                                            <  2:8507/150‑1 (MQ=255)

                                                                                                            aCGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                                          <  2:935190/150‑1 (MQ=255)

                                                                                                            aCGGCTTTGTTCGGGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                                          <  2:935680/150‑1 (MQ=255)

                                                                                                               gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGCTAAAATGCCAGCCCTAATCAGCGTTGCAGGATa                                                                                                                                                >  1:115116/1‑141 (MQ=255)

                                                                                                               gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                                         >  3:451348/1‑132 (MQ=255)

                                                                                                               gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGt                                                                                                                                                         >  3:408676/1‑132 (MQ=255)

                                                                                                               gCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGc                                                                                                                                       >  2:562288/1‑150 (MQ=255)

                                                                                                                    gTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCa                                                                                                                                           >  1:50557/1‑141 (MQ=255)

                                                                                                                    gTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCa                                                                                                                                           >  1:11671/1‑141 (MQ=255)

                                                                                                                     ttCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAc                                                                                                                                          >  1:218588/1‑141 (MQ=255)

                                                                                                                     ttCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttc                                                                               <  4:627143/200‑1 (MQ=255)

                                                                                                                       cGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGAt                                                                                                                                                 <  3:334458/132‑1 (MQ=255)

                                                                                                                           aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                                           <  2:125669/150‑1 (MQ=255)

                                                                                                                           aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                                           <  2:951625/150‑1 (MQ=255)

                                                                                                                           aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAAAAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCATCGCTCACTCTTCAAc                                                                                                                           <  2:818063/150‑1 (MQ=255)

                                                                                                                           aGCATGGCGACGATAAAGGGCTGGTCGTCTGGGCAGGGCAACAGTAACTTGTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                                           <  2:544042/150‑1 (MQ=255)

                                                                                                                            gcgtGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGAAACAGTAACTTTTCCGGCTTCACGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGc                                                                                                                                            <  3:721425/129‑1 (MQ=255)

                                                                                                                             cATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTAc                                                                       <  4:649258/200‑1 (MQ=255)

                                                                                                                                  cgacgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGt                                                                  <  4:537718/200‑1 (MQ=255)

                                                                                                                                    acgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTc                                                                >  4:51764/1‑200 (MQ=255)

                                                                                                                                       aTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGCTAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGc                                                                                                               >  2:597102/1‑150 (MQ=255)

                                                                                                                                       aTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGa                                                                                                                        >  1:14538/1‑141 (MQ=255)

                                                                                                                                       aTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCGTCCCGTTCGTCAGCACCTCGGGAAGCCGCCAACCAGGATAAATTCTCAGCCCTAATCAGCGTTGCAGTCTAAAGCACCGCTCActc                                                                                                                                 >  3:635966/1‑132 (MQ=255)

                                                                                                                                       aTAAAGTGCGGGTCGTCGGGGCAGGGCAACAGTAACGTTTCCGGCTTCCCGTTCGTCAGTACCGCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCaa                                                                                                     <  4:597154/160‑1 (MQ=255)

                                                                                                                                         aaaGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAg                                                           <  4:665466/200‑1 (MQ=255)

                                                                                                                                             tGCTGGTCGGCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAAc                                                                                                                           <  3:546337/132‑1 (MQ=255)

                                                                                                                                               cTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATcc                                                     <  4:55330/200‑1 (MQ=255)

                                                                                                                                                         gggcagggcaACAGTAACTTTTCCGGCTTCACGTACGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGc                                                                                                               <  3:319962/132‑1 (MQ=255)

                                                                                                                                                          ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACAt                                          <  4:757770/200‑1 (MQ=255)

                                                                                                                                                          ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACAt                                          <  4:109407/200‑1 (MQ=255)

                                                                                                                                                              gggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGt                                                                                                 <  1:568604/141‑1 (MQ=255)

                                                                                                                                                              gggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTAtt                                                                                        >  2:643881/1‑150 (MQ=255)

                                                                                                                                                               ggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTg                                                                                       <  2:420590/150‑1 (MQ=255)

                                                                                                                                                               ggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTg                                                                                       <  2:431258/150‑1 (MQ=255)

                                                                                                                                                                gcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAg                                                                                               <  1:79701/141‑1 (MQ=255)

                                                                                                                                                                   aCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCaa                                                                                                     >  3:390894/1‑132 (MQ=255)

                                                                                                                                                                   aCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                                            >  1:426116/1‑141 (MQ=255)

                                                                                                                                                                   aCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCttt                                 >  4:700721/1‑200 (MQ=255)

                                                                                                                                                                   aCAGTAACTTGTCCGGATTCCCGTTCGTCAGTACCTCGGGAAGACGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGt                                                                                            <  1:439077/141‑1 (MQ=255)

                                                                                                                                                                       tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACTGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttc                                                                               <  2:221175/150‑1 (MQ=255)

                                                                                                                                                                       tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGt                                                                                                 <  3:158754/132‑1 (MQ=255)

                                                                                                                                                                        aaCTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTg                                                                                       >  1:19674/1‑141 (MQ=255)

                                                                                                                                                                        aaCTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttcc                                                                              >  2:922693/1‑150 (MQ=255)

                                                                                                                                                                          gttttCCGGCTTCCCGTTCAGCAGTACCACGCGAAGCCGCCGACCAAGCTAAAATATCAGCCCTAATCAGCGTTGCAGGATAAATCACACCCCCCTCTTCATCATTCCCACTCGCACCCCaccccatttcac                                                                                              >  3:380282/2‑121 (MQ=255)

                                                                                                                                                                          cTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGc                                                                                              >  3:158561/1‑132 (MQ=255)

                                                                                                                                                                           ttttCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTg                                                                           <  2:747931/150‑1 (MQ=255)

                                                                                                                                                                                 ggCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACag                                                                     <  2:551787/150‑1 (MQ=255)

                                                                                                                                                                                     tCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTAccc               >  4:559299/1‑200 (MQ=255)

                                                                                                                                                                                     tCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTAccc               <  4:552079/200‑1 (MQ=255)

                                                                                                                                                                                     tCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTAccc               <  4:931285/200‑1 (MQ=255)

                                                                                                                                                                                          ttCGTCAGTACCTCGGGAAGCCGCCAANNAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCNNNCTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACag                                                                     <  1:396461/141‑1 (MQ=255)

                                                                                                                                                                                           tCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAg                                                           <  2:625837/150‑1 (MQ=255)

                                                                                                                                                                                            cGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttcctt                                                                            >  3:383807/1‑132 (MQ=255)

                                                                                                                                                                                            cGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACagag                                                                   <  1:562226/141‑1 (MQ=255)

                                                                                                                                                                                            cGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACCGAGTTAGACAGa                                                          >  2:227155/1‑150 (MQ=255)

                                                                                                                                                                                            cGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGa                                                          >  2:933746/1‑150 (MQ=255)

                                                                                                                                                                                                  tACCTCGGGAAGCCGCCAACTAGGATAAAATGTCAGCCTAAATCAGCGTTGCAGGATAAAGCACCCCTCACTCTTAAACAGCCCTATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGCCTTTCTCCCTTTTTGGTGACAAATTTACCCGCCACTCCGGCAt  <  4:753622/200‑1 (MQ=255)

GTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCGACAGATATCCCGCTATGACATTCTCCCTTTTTGGTGACAAATTTACCCGCCACTCCGGCAT  >  NC_000913/3739358‑3739751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.