BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4309625	125 (1.220)	4 (0.040)	4/288	9.8	3.3%	coding (1356/1533 nt)	alsA	D‑allose ABC transporter ATPase
*	?	NC_000913	= 4309649	114 (1.180)	4 (0.040)	4/288	9.8	3.3%	coding (1332/1533 nt)	alsA	D‑allose ABC transporter ATPase
Rejected: Position hash score below cutoff.

Only 100 of 125 total aligned reads displayed.

CTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGATTTTCAGCGGTAC  >  NC_000913/4309431‑4309821

ctcgctcgCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCAc                                                                                                                                                                                                 <  2:65187/200‑1 (MQ=255)

               ttttACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGc                                                                                                                                                                                  <  2:703956/200‑1 (MQ=255)

                 ttACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCtt                                                                                                                                                                                >  2:466745/1‑200 (MQ=255)

                           ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTATTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:534298/1‑200 (MQ=255)

                           ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:165953/1‑200 (MQ=255)

                           ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:688138/1‑200 (MQ=255)

                           ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:41541/1‑200 (MQ=255)

                                              tctcCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGt                                                                                                                                                   <  2:587841/200‑1 (MQ=255)

                                               ctcctcTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGtt                                                                                                                                                  <  2:700093/200‑1 (MQ=255)

                                                 cctcTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCa                                                                                                                                                                                                  >  1:204728/1‑150 (MQ=255)

                                                 cctcTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCa                                                                                                                                                >  2:793080/1‑200 (MQ=255)

                                                 cctcTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCa                                                                                                                                                >  2:354545/1‑200 (MQ=255)

                                                           cATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCAc                                                                                                                                                                                                 <  3:471804/141‑1 (MQ=255)

                                                           cATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCAc                                                                                                                                                                                                 >  3:295298/1‑141 (MQ=255)

                                                                cATCGCGATTCGGCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGGCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCa                                                                                                                                                                                                     <  4:562013/132‑1 (MQ=255)

                                                                cATCACGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGt                                                                                                                                                                                            <  3:387299/141‑1 (MQ=255)

                                                                 aTCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTa                                                                                                                                                                                           >  3:717744/1‑141 (MQ=255)

                                                                  tCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTaa                                                                                                                                                                                          <  3:223334/141‑1 (MQ=255)

                                                                  tCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTc                                                                                                                               <  2:765409/200‑1 (MQ=255)

                                                                   cgcgATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTaaa                                                                                                                                                                                         <  3:446202/141‑1 (MQ=255)

                                                                         tCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCgg                                                                                                                                                                                   >  3:46020/1‑141 (MQ=255)

                                                                          cGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAac                                                                                                                       >  2:133987/1‑200 (MQ=255)

                                                                           gTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGGCCGCCAGTTGGCGCATCACGTTGTAAATTTCGGCTTTCGCGCCa                                                                                                                                                                        >  1:719965/1‑150 (MQ=255)

                                                                             cAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagc                                                                                                                    <  2:232363/200‑1 (MQ=255)

                                                                               ggATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAAttt                                                                                                                                                                                      >  4:363638/1‑132 (MQ=255)

                                                                                     gCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGc                                                                                                                                                              <  1:547153/150‑1 (MQ=255)

                                                                                           gtcgtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGgag                                                                                                      <  2:363941/200‑1 (MQ=255)

                                                                                              gtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCCTCCCTTTGTAAATTTCGGCTTTCGCGCCAACTTCGATGc                                                                                                                                                              >  3:376721/1‑141 (MQ=255)

                                                                                              gtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAGTTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATc                                                                                                   >  2:67754/1‑200 (MQ=255)

                                                                                              gtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCCTTTGGAGATc                                                                                                   >  2:668749/1‑200 (MQ=255)

                                                                                                 cTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGt                                                                                                                                                                    <  4:218513/132‑1 (MQ=255)

                                                                                                   tCGCAGAACACGGCGATGCGTTCGCATACGGTGATAATTTCAGGTAGTACAGATTACACCCACTCGAGTACTTTTCCGTCTCACGCCAGTTGGCGCGTAACTTTGTAACTTTCGGCTTTCGCGCCACCGACg                                                                                                                                                                  >  4:694786/1‑132 (MQ=255)

                                                                                                   tCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCgg                                                                                                                                                         >  3:558946/1‑141 (MQ=255)

                                                                                                   tCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCa                                                                                                                                                >  1:197590/1‑150 (MQ=255)

                                                                                                   tCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGAc                                                                                              >  2:421906/1‑200 (MQ=255)

                                                                                                     gCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGAt                                                                                                                                                                >  4:662230/1‑132 (MQ=255)

                                                                                                     gCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGt                                                                                                                                                       >  3:668249/1‑141 (MQ=255)

                                                                                                        gAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTCAATTTCGGCTTTCGCGCCAACGTCGATGcc                                                                                                                                                             >  4:46969/1‑132 (MQ=255)

                                                                                                        gAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGcc                                                                                                                                                             >  4:118081/1‑132 (MQ=255)

                                                                                                           cacGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTc                                                                                                                                                 <  3:699078/141‑1 (MQ=255)

                                                                                                             cGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCggg                                                                                                                                                        >  4:715385/1‑132 (MQ=255)

                                                                                                             cGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCAt                                                                                                                                               >  3:346734/1‑141 (MQ=255)

                                                                                                               gCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGAtt                                                                                  >  2:14143/1‑200 (MQ=255)

                                                                                                                cGATGCGGTCGCGGCAGGTGTTAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCAATTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCa                                                                                                                                   <  1:772188/150‑1 (MQ=255)

                                                                                                                cGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCa                                                                                                                                   <  1:329289/150‑1 (MQ=255)

                                                                                                                    gCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTc                                                                                                                                                 <  4:313960/132‑1 (MQ=255)

                                                                                                                    gCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTcccc                                                                             <  2:204744/200‑1 (MQ=255)

                                                                                                                       gTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCgg                                                                                                                            >  1:541670/1‑150 (MQ=255)

                                                                                                                        tCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATc                                                                                                                                    <  3:507785/141‑1 (MQ=255)

                                                                                                                         cGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGAACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        >  2:611577/1‑200 (MQ=255)

                                                                                                                              aCGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTc                                                                   <  2:718307/200‑1 (MQ=255)

                                                                                                                              aCGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTc                                                                   <  2:719855/200‑1 (MQ=255)

                                                                                                                               cGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAaataa                                                                                                                                      >  4:441738/1‑132 (MQ=255)

                                                                                                                               cGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATAGAAAATAATCACTTCCGGGCAacagc                                                                                                                    >  1:307128/1‑150 (MQ=255)

                                                                                                                                 gTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGCTGCCGCGGGTAGGTTCATCGAAAACAATCACTTCCggg                                                                                                                           >  3:23180/1‑141 (MQ=255)

                                                                                                                                 gTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTACTCGAAAATAATCACTTCAGGGCAACAGCACAGCCATTTGGCGCTCAGGACTTTCTGCTGATTTCCCCCGGAGAGTACGGt                                                                >  2:80549/1‑200 (MQ=255)

                                                                                                                                   gATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCAGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGa                                                              <  2:824791/200‑1 (MQ=255)

                                                                                                                                     tAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAac                                                                                                                       <  3:222850/141‑1 (MQ=255)

                                                                                                                                       aTTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATAtt                                                          >  2:2879/1‑200 (MQ=255)

                                                                                                                                       aTTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATAtt                                                          >  2:694307/1‑200 (MQ=255)

                                                                                                                                       aTTTCAGGTAGTTCAGATGACACCACCAGGATGACTTTTCCGACGTCCGCCAGTTGGCGCATCACTTTTTAAATTTCGGCTTTCGCTCCAACGTCGCTGCCGCGGGTAGGTTCATCGAACATATTCCTTTCCTGGACACAGCACAGcctt                                                                                                            >  1:727588/1‑148 (MQ=255)

                                                                                                                                        tttCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGGGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGACATTCGGAGATCAGGACTTTCTGCTGATTTCCCCCGAAGAGTTCGGTGATATTc                                                         <  2:378962/200‑1 (MQ=255)

                                                                                                                                          tCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcac                                                                                                                  <  3:412818/141‑1 (MQ=255)

                                                                                                                                           cAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTgg                                                                                                        <  1:703739/150‑1 (MQ=255)

                                                                                                                                            aGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcacag                                                                                                                >  3:72561/1‑141 (MQ=255)

                                                                                                                                               tAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCa                                                                                                             <  3:85322/141‑1 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGCTGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTAcc                                                >  2:801540/1‑200 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCCACGTCGATGCCGCGGGTAGGTTCATCGAAACTAATCACTTCCGGGCAacagc                                                                                                                    >  4:394019/1‑132 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCCCTTCCGGGCAacagc                                                                                                                    >  4:327611/1‑132 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCa                                                                                                  >  1:624653/1‑150 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCa                                                                                                  >  1:183638/1‑150 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTAcc                                                >  2:47224/1‑200 (MQ=255)

                                                                                                                                                 gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGCTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGCAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCAtt                                                                                                           >  3:151285/1‑141 (MQ=255)

                                                                                                                                                   tCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTg                                                                                                         >  3:9544/1‑141 (MQ=255)

                                                                                                                                                    cAGATGACACCATCAGGATGACTTTGCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTgg                                                                                                        <  3:622649/141‑1 (MQ=255)

                                                                                                                                                      gATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcacagc                                                                                                               <  4:446029/132‑1 (MQ=255)

                                                                                                                                                       aTGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGgaga                                                                                                     <  3:456817/141‑1 (MQ=255)

                                                                                                                                                        tGACACCAACAGGATGACTTTTCCGTCGTCCGCCAGTAGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGAGGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCa                                                                                                             <  4:528141/132‑1 (MQ=255)

                                                                                                                                                         gACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTc                                                                                          >  1:695318/1‑150 (MQ=255)

                                                                                                                                                           cacCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGATCGGTGATATTCTGGTTTACCGAATGACAtt                                      >  2:682966/1‑200 (MQ=255)

                                                                                                                                                             ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    >  2:574550/1‑200 (MQ=255)

                                                                                                                                                             ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    >  2:405311/1‑200 (MQ=255)

                                                                                                                                                             ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    <  2:35923/200‑1 (MQ=255)

                                                                                                                                                             ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    >  2:715890/1‑200 (MQ=255)

                                                                                                                                                                tCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTGTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGgaga                                                                                                     <  4:610900/132‑1 (MQ=255)

                                                                                                                                                                   ggATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTc                                                                                >  1:639970/1‑150 (MQ=255)

                                                                                                                                                                   ggATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGcc                              >  2:305026/1‑200 (MQ=255)

                                                                                                                                                                      tGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGa                                                                                               >  4:591547/1‑132 (MQ=255)

                                                                                                                                                                       gACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTccccc                                                                            <  1:601778/150‑1 (MQ=255)

                                                                                                                                                                        aCTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCcagcag                         <  2:557233/200‑1 (MQ=255)

                                                                                                                                                                           tttCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        <  1:188566/150‑1 (MQ=255)

                                                                                                                                                                            ttCCGTCGTCCGCCAGGTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTct                                                                                         <  4:112418/132‑1 (MQ=255)

                                                                                                                                                                                   gtcCGCCAGTGGGCGCATCACTTTGTAAATTTCGGGTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGt                                                                <  1:491703/150‑1 (MQ=255)

                                                                                                                                                                                     ccGCCAGTTGGCGCATCACTTTGTAAATTTCGGCCTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCTCCGGAGAGTTCGGTGATCTTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGAtct            >  2:411361/1‑198 (MQ=255)

                                                                                                                                                                                          ggTTGGCGCATCACTTTGTAAATTTCGACTGTCGCCCCAACGTCGATGCCGCGGGTAGGTTAATCGAAAATATTCACTTCCGGGCAACGGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTc                                                         <  1:653931/149‑1 (MQ=255)

                                                                                                                                                                                          aGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTc                                                         <  1:303753/150‑1 (MQ=255)

                                                                                                                                                                                             tGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        <  4:668941/132‑1 (MQ=255)

                                                                                                                                                                                               gcgcATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGtt                                                    >  1:526491/1‑150 (MQ=255)

                                                                                                                                                                                               gcgcATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGtt                                                    >  1:581029/1‑150 (MQ=255)

                                                                                                                                                                                               gcgcATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGATTTTCAGCGGTAc  >  2:40722/1‑200 (MQ=255)

CTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGATTTTCAGCGGTAC  >  NC_000913/4309431‑4309821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.