BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4309625	125 (1.220)	4 (0.040)	4/288	9.8	3.3%	coding (1356/1533 nt)	alsA	D‑allose ABC transporter ATPase
*	?	NC_000913	= 4309649	114 (1.180)	4 (0.040)	4/288	9.8	3.3%	coding (1332/1533 nt)	alsA	D‑allose ABC transporter ATPase
Rejected: Position hash score below cutoff.

Only 100 of 119 total aligned reads displayed.

GGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGATTTTCAGCGGTAC  >  NC_000913/4309458‑4309821

ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTATTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:534298/1‑200 (MQ=255)

ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:165953/1‑200 (MQ=255)

ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:688138/1‑200 (MQ=255)

ggTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAAc                                                                                                                                                                      >  2:41541/1‑200 (MQ=255)

                   tctcCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGt                                                                                                                                                   <  2:587841/200‑1 (MQ=255)

                    ctcctcTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGtt                                                                                                                                                  <  2:700093/200‑1 (MQ=255)

                      cctcTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCa                                                                                                                                                >  2:354545/1‑200 (MQ=255)

                                       tCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTc                                                                                                                               <  2:765409/200‑1 (MQ=255)

                                               cGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAac                                                                                                                       >  2:133987/1‑200 (MQ=255)

                                                gTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGGCCGCCAGTTGGCGCATCACGTTGTAAATTTCGGCTTTCGCGCCa                                                                                                                                                                        >  1:719965/1‑150 (MQ=255)

                                                  cAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagc                                                                                                                    <  2:232363/200‑1 (MQ=255)

                                                         tGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCa                                                                                                             <  2:6170/200‑1 (MQ=255)

                                                         tGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCa                                                                                                             <  2:332662/200‑1 (MQ=255)

                                                          gCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGc                                                                                                                                                              <  1:547153/150‑1 (MQ=255)

                                                              cAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTgg                                                                                                        >  2:17162/1‑200 (MQ=255)

                                                              cAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTgg                                                                                                        <  2:85891/200‑1 (MQ=255)

                                                                gtcgtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGgag                                                                                                      <  2:363941/200‑1 (MQ=255)

                                                                   gtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCCTCCCTTTGTAAATTTCGGCTTTCGCGCCAACTTCGATGc                                                                                                                                                              >  3:376721/1‑141 (MQ=255)

                                                                   gtcCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCCTTTGGAGATc                                                                                                   >  2:668749/1‑200 (MQ=255)

                                                                        tCGCAGAACACGGCGATGCGTTCGCATACGGTGATAATTTCAGGTAGTACAGATTACACCCACTCGAGTACTTTTCCGTCTCACGCCAGTTGGCGCGTAACTTTGTAACTTTCGGCTTTCGCGCCACCGACg                                                                                                                                                                  >  4:694786/1‑132 (MQ=255)

                                                                        tCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCgg                                                                                                                                                         >  3:558946/1‑141 (MQ=255)

                                                                        tCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCa                                                                                                                                                >  1:197590/1‑150 (MQ=255)

                                                                        tCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGAc                                                                                              >  2:421906/1‑200 (MQ=255)

                                                                          gCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGAt                                                                                                                                                                >  4:662230/1‑132 (MQ=255)

                                                                          gCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGt                                                                                                                                                       >  3:668249/1‑141 (MQ=255)

                                                                             gAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTCAATTTCGGCTTTCGCGCCAACGTCGATGcc                                                                                                                                                             >  4:46969/1‑132 (MQ=255)

                                                                             gAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGcc                                                                                                                                                             >  4:118081/1‑132 (MQ=255)

                                                                                cacGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTc                                                                                                                                                 <  3:699078/141‑1 (MQ=255)

                                                                                  cGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCAt                                                                                                                                               >  3:346734/1‑141 (MQ=255)

                                                                                    gCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGAtt                                                                                  >  2:14143/1‑200 (MQ=255)

                                                                                     cGATGCGGTCGCGGCAGGTGTTAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCAATTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCa                                                                                                                                   <  1:772188/150‑1 (MQ=255)

                                                                                         gCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTc                                                                                                                                                 <  4:313960/132‑1 (MQ=255)

                                                                                            gTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATc                                                                                                                                              >  4:659970/1‑132 (MQ=255)

                                                                                            gTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCgg                                                                                                                            >  1:541670/1‑150 (MQ=255)

                                                                                             tCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATc                                                                                                                                    <  3:507785/141‑1 (MQ=255)

                                                                                              cGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGAACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        >  2:611577/1‑200 (MQ=255)

                                                                                                   aCGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTc                                                                   <  2:719855/200‑1 (MQ=255)

                                                                                                   aCGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTc                                                                   <  2:718307/200‑1 (MQ=255)

                                                                                                    cGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATAGAAAATAATCACTTCCGGGCAacagc                                                                                                                    >  1:307128/1‑150 (MQ=255)

                                                                                                      gTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTACTCGAAAATAATCACTTCAGGGCAACAGCACAGCCATTTGGCGCTCAGGACTTTCTGCTGATTTCCCCCGGAGAGTACGGt                                                                >  2:80549/1‑200 (MQ=255)

                                                                                                        gATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCAGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGa                                                              <  2:824791/200‑1 (MQ=255)

                                                                                                          tAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAac                                                                                                                       <  3:222850/141‑1 (MQ=255)

                                                                                                            aTTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATAtt                                                          >  2:2879/1‑200 (MQ=255)

                                                                                                            aTTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATAtt                                                          >  2:694307/1‑200 (MQ=255)

                                                                                                            aTTTCAGGTAGTTCAGATGACACCACCAGGATGACTTTTCCGACGTCCGCCAGTTGGCGCATCACTTTTTAAATTTCGGCTTTCGCTCCAACGTCGCTGCCGCGGGTAGGTTCATCGAACATATTCCTTTCCTGGACACAGCACAGcctt                                                                                                            >  1:727588/1‑148 (MQ=255)

                                                                                                             tttCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGGGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGACATTCGGAGATCAGGACTTTCTGCTGATTTCCCCCGAAGAGTTCGGTGATATTc                                                         <  2:378962/200‑1 (MQ=255)

                                                                                                               tCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcac                                                                                                                  <  3:412818/141‑1 (MQ=255)

                                                                                                               tCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcac                                                                                                                  <  3:626306/141‑1 (MQ=255)

                                                                                                                cAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTgg                                                                                                        <  1:703739/150‑1 (MQ=255)

                                                                                                                 aGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcacag                                                                                                                >  3:72561/1‑141 (MQ=255)

                                                                                                                    tAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCa                                                                                                             <  3:85322/141‑1 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGCTGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTAcc                                                >  2:801540/1‑200 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCCACGTCGATGCCGCGGGTAGGTTCATCGAAACTAATCACTTCCGGGCAacagc                                                                                                                    >  4:394019/1‑132 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCCCTTCCGGGCAacagc                                                                                                                    >  4:327611/1‑132 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagc                                                                                                                    >  4:184926/1‑132 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCa                                                                                                  >  1:624653/1‑150 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCa                                                                                                  >  1:183638/1‑150 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTAcc                                                >  2:47224/1‑200 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTCCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGGTCGGTGATATTCTGGTTTAcc                                                >  2:394404/1‑200 (MQ=255)

                                                                                                                      gTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGCTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGCAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCAtt                                                                                                           >  3:151285/1‑141 (MQ=255)

                                                                                                                        tCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTg                                                                                                         >  3:9544/1‑141 (MQ=255)

                                                                                                                         cAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTgg                                                                                                        <  3:470982/141‑1 (MQ=255)

                                                                                                                           gATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAacagcacagc                                                                                                               <  4:446029/132‑1 (MQ=255)

                                                                                                                            aTGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGgaga                                                                                                     <  3:456817/141‑1 (MQ=255)

                                                                                                                             tGACACCAACAGGATGACTTTTCCGTCGTCCGCCAGTAGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGAGGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCa                                                                                                             <  4:528141/132‑1 (MQ=255)

                                                                                                                              gACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTc                                                                                          >  1:695318/1‑150 (MQ=255)

                                                                                                                                cacCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACAtt                                      >  2:55102/1‑200 (MQ=255)

                                                                                                                                cacCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGATCGGTGATATTCTGGTTTACCGAATGACAtt                                      >  2:682966/1‑200 (MQ=255)

                                                                                                                                 acCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTctgc                                                                                       <  1:586415/150‑1 (MQ=255)

                                                                                                                                  ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    >  2:405311/1‑200 (MQ=255)

                                                                                                                                  ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    >  2:715890/1‑200 (MQ=255)

                                                                                                                                  ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    <  2:768861/200‑1 (MQ=255)

                                                                                                                                  ccATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTc                                    >  2:574550/1‑200 (MQ=255)

                                                                                                                                   cATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCa                                   >  2:417782/1‑200 (MQ=255)

                                                                                                                                     tCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTGTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGgaga                                                                                                     <  4:610900/132‑1 (MQ=255)

                                                                                                                                      cAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGAt                                                                                                    >  4:50937/1‑132 (MQ=255)

                                                                                                                                      cAGGATGACTTTTCCGTCGTCCGCCAGTCGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCGCAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAgcg                                >  2:68330/1‑200 (MQ=255)

                                                                                                                                        ggATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTc                                                                                >  1:639970/1‑150 (MQ=255)

                                                                                                                                        ggATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGcc                              >  2:305026/1‑200 (MQ=255)

                                                                                                                                            gACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTccccc                                                                            <  1:601778/150‑1 (MQ=255)

                                                                                                                                                tttCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        <  1:188566/150‑1 (MQ=255)

                                                                                                                                                 ttCCGTCGTCCGCCAGGTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTct                                                                                         <  4:112418/132‑1 (MQ=255)

                                                                                                                                                        gtcCGCCAGTGGGCGCATCACTTTGTAAATTTCGGGTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGt                                                                <  1:491703/150‑1 (MQ=255)

                                                                                                                                                         tcCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        <  3:238388/141‑1 (MQ=255)

                                                                                                                                                               ggTTGGCGCATCACTTTGTAAATTTCGACTGTCGCCCCAACGTCGATGCCGCGGGTAGGTTAATCGAAAATATTCACTTCCGGGCAACGGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTc                                                         <  1:653931/149‑1 (MQ=255)

                                                                                                                                                               aGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTc                                                         <  1:303753/150‑1 (MQ=255)

                                                                                                                                                                  tGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        <  4:668941/132‑1 (MQ=255)

                                                                                                                                                                  tGGCGCATCACTTTGTAAATTTCGACTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGgag                                                                        <  4:384971/132‑1 (MQ=255)

                                                                                                                                                                    gcgcATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGtt                                                    >  1:493265/1‑150 (MQ=255)

                                                                                                                                                                    gcgcATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGtt                                                    >  1:526491/1‑150 (MQ=255)

                                                                                                                                                                    gcgcATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGATTTTCAGCGGTAc  >  2:40722/1‑200 (MQ=255)

                                                                                                                                                                         tCACTTTGTAAGTTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCg                                               <  1:67749/150‑1 (MQ=255)

                                                                                                                                                                         tCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCg                                               <  1:700233/150‑1 (MQ=255)

                                                                                                                                                                           aCTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTgg                                                      <  3:278351/141‑1 (MQ=255)

                                                                                                                                                                            cTTTGTACATTTCGGCTTTCGCGCCCACCTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACCGCACAGCCATTTGGCGATCAGGACTTTCTGCTGATTTCCCCCGGCGAGTTCGGTGATATTCTGGTTTACCgtct                                            >  1:129140/1‑147 (MQ=255)

                                                                                                                                                                            cTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGa                                                              >  4:460653/1‑132 (MQ=255)

                                                                                                                                                                            cTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGa                                                              <  4:233966/132‑1 (MQ=255)

                                                                                                                                                                            cTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGt                                                     >  3:391479/1‑141 (MQ=255)

                                                                                                                                                                                    aTTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTgg                                                      <  4:108720/132‑1 (MQ=255)

                                                                                                                                                                                          gCTTTCGCGCCAACGTCGATGCCGAGGGTAGGTTCATCAAAAATAATCACTTCCGGGCAACAGCACAGCCATTGGGAGATCAGGACTTTCTGCGGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACAt                                       <  3:692380/141‑1 (MQ=255)

GGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATGCGGTCGCAGACGGTGATAATTTCAGGTAGTTCAGATGACACCATCAGGATGACTTTTCCGTCGTCCGCCAGTTGGCGCATCACTTTGTAAATTTCGGCTTTCGCGCCAACGTCGATGCCGCGGGTAGGTTCATCGAAAATAATCACTTCCGGGCAACAGCACAGCCATTTGGAGATCAGGACTTTCTGCTGATTTCCCCCGGAGAGTTCGGTGATATTCTGGTTTACCGAATGACATTTCAGCGCCAGCAGTTCGCGTTGATTTTCAGCGGTAC  >  NC_000913/4309458‑4309821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.