BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3659552 =	249 (2.430)	3 (0.030)	3/290	10.6	1.3%	coding (321/1158 nt)	mdtE	anaerobic multidrug efflux transporter, ArcA‑regulated
*	?	NC_000913	3659580 =	229 (2.350)	3 (0.030)	3/290	10.6	1.3%	coding (349/1158 nt)	mdtE	anaerobic multidrug efflux transporter, ArcA‑regulated
Rejected: Position hash score below cutoff.

Only 100 of 239 total aligned reads displayed.

GAATTGCCCGGTAGAACCGTTCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCGTCAGCGGGAA  >  NC_000913/3659382‑3659776

          gTAGAACCGTTCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATc                                                                                                                                                                                           >  2:317415/1‑200 (MQ=255)

          gTAGAACCGTTCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATc                                                                                                                                                                                           >  2:691959/1‑200 (MQ=255)

                   ttCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAAc                                                                                                                                                                                  <  2:139325/200‑1 (MQ=255)

                    tCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAAcc                                                                                                                                                                                 <  2:15651/200‑1 (MQ=255)

                     ccTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCg                                                                                                                                                                                >  2:220811/1‑200 (MQ=255)

                                           gTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGAcc                                                                                                                                                          >  2:344069/1‑200 (MQ=255)

                                           gTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGAcc                                                                                                                                                          >  2:489073/1‑200 (MQ=255)

                                             ccccAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCaa                                                                                                                                                        >  2:371131/1‑200 (MQ=255)

                                                          gTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCa                                                                                                                                                                                                      >  3:259653/1‑141 (MQ=255)

                                                          gTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCa                                                                                                                                                                                             >  1:769551/1‑150 (MQ=255)

                                                          gTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCa                                                                                                                                                                                             >  1:460308/1‑150 (MQ=255)

                                                          gTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCa                                                                                                                                                                                             >  1:111046/1‑150 (MQ=255)

                                                          gTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGt                                                                                                                                           >  2:207644/1‑200 (MQ=255)

                                                          gTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCCCTCTACCGCCAGCa                                                                                                                                                                                                      >  3:236908/1‑141 (MQ=255)

                                                                     aaaCGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAAc                                                                                                                                                                                  <  1:220215/150‑1 (MQ=255)

                                                                      aaCGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGac                                                                                                                               <  2:766442/200‑1 (MQ=255)

                                                                         gCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGccc                                                                                                                                                                                                <  4:738329/132‑1 (MQ=255)

                                                                          cAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCTGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTCACCGTCAGGCATCGTTGCTGAATACCAACTACGTTAGCCGACAGGATTACGACACcg                                                                                                                           >  2:11954/1‑200 (MQ=255)

                                                                            aCTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCa                                                                                                                                                                                             >  4:5624/1‑132 (MQ=255)

                                                                            aCTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCTCCTTTCACCGCCAgg                                                                                                                                                                           >  1:168542/1‑150 (MQ=255)

                                                                            aCTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTa                                                                                                                                                                                    >  3:514093/1‑141 (MQ=255)

                                                                            aCTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTAACAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCAAGCAATGCCCGCATCACCTTTa                                                                                                                                                                                    >  3:511420/1‑141 (MQ=255)

                                                                                tATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCa                                                                                                                     >  2:426395/1‑200 (MQ=255)

                                                                                       ggCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAAc                                                                                                                                                                                  <  4:20181/132‑1 (MQ=255)

                                                                                         cGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCCGGCATCGTTGCTGaa                                                                                                                                                              >  1:679996/1‑150 (MQ=255)

                                                                                           aTAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTtgaat                                                                                                          <  2:176304/200‑1 (MQ=255)

                                                                                            tAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGtt                                                                                                                                                                    <  3:638872/141‑1 (MQ=255)

                                                                                             aaaGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGAcc                                                                                                                                                          >  1:243158/1‑150 (MQ=255)

                                                                                                gTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTg                                                                                                                                                                >  3:271909/1‑141 (MQ=255)

                                                                                                  gAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAg                                                                                                   >  2:331833/1‑200 (MQ=255)

                                                                                                  gAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAg                                                                                                   >  2:171465/1‑200 (MQ=255)

                                                                                                  gAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCAGCGTTGCTGaa                                                                                                                                                              >  3:548074/1‑141 (MQ=255)

                                                                                                   aaCCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGa                                                                                                  >  2:324487/1‑200 (MQ=255)

                                                                                                   aaCCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGa                                                                                                  >  2:358674/1‑200 (MQ=255)

                                                                                                     tcAGGGCGATTCGCTGGATCAGGTTGGTCCTGCACCTGTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAGCCGCCAGGCATCGtt                                                                                                                                                                    <  4:711692/131‑1 (MQ=255)

                                                                                                        gggCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAg                                                                                                                                               >  1:124519/1‑150 (MQ=255)

                                                                                                         ggCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAAc                                                                                                                                                       >  3:393075/1‑141 (MQ=255)

                                                                                                           cgtttCGCTGTAGCGAATTGACCTGGAACCTTTCCAGGCCG‑GCCAAACCTCGCCAAAAGGCTGGCTGGGGAAGCGGCTCTCTACTGCCAGC‑ATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGt                                                                                         <  2:407237/197‑1 (MQ=255)

                                                                                                           cGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGA‑TACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGt                                                                                         <  2:732233/200‑1 (MQ=255)

                                                                                                                 gCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCg                                                                                    <  2:648899/200‑1 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGTCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCCAAAGCGCTCCCTACCGCCAGCAATGCCCGCATCACCCTTAACCGCCAGGCATCGCTGCTGAAGACCAACTa                                                                                                                                                     >  4:621376/1‑132 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCACTGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGCCCAATTa                                                                                                                                                     >  4:156478/1‑132 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTa                                                                                                                                                     >  4:742418/1‑132 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCg                                                                                                                                            >  3:74302/1‑141 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCg                                                                                                                                            >  3:677073/1‑141 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCg                                                                                                                                            >  3:448371/1‑141 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTa                                                                                                                                   >  1:41294/1‑150 (MQ=255)

                                                                                                                    gTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGCTAGCCg                                                                                                                                            >  3:139463/1‑141 (MQ=255)

                                                                                                                          gATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCCCCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGa                                                                                                                                      >  3:114953/1‑141 (MQ=255)

                                                                                                                          gATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAggc                                                                                                                                      >  3:193333/1‑140 (MQ=255)

                                                                                                                          gATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGa                                                                                                                                      >  3:588988/1‑141 (MQ=255)

                                                                                                                          gATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGa                                                                                                                                      >  3:153615/1‑141 (MQ=255)

                                                                                                                          gATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGaccc                                                                                                                             >  1:361207/1‑148 (MQ=255)

                                                                                                                          gATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAg                                                                           >  2:812684/1‑200 (MQ=255)

                                                                                                                               aTCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAAACGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACg                                                                                                                                 >  3:704822/1‑141 (MQ=255)

                                                                                                                               aTCCTGCACCTTTACAGGCCGAGCCAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCATTGCCCGCCTCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTc                                                                                                                                          >  4:308202/1‑132 (MQ=255)

                                                                                                                                tCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCCATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAAATACGTTAGCCGTCAGGATTACGACACCGCGCGCAACCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGTCAAAGCGGCTg                                                                     >  2:735746/1‑200 (MQ=255)

                                                                                                                                tCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTg                                                                     >  2:556121/1‑200 (MQ=255)

                                                                                                                                tCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTAAGCCGTAAGGATTACGACACcgcgcg                                                                                                                       >  1:707038/1‑150 (MQ=255)

                                                                                                                                 ccTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGac                                                                                                                               <  3:396889/141‑1 (MQ=255)

                                                                                                                                   tGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGacac                                                                                                                             <  3:341472/141‑1 (MQ=255)

                                                                                                                                      aCCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAAc                                                               <  2:784644/200‑1 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGCAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACAAACTACGTTAGCCGCCCGGATTAc                                                                                                                                  >  4:375212/1‑132 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCATCAATGCCCGCATCACCTTTAACCGCCAGTCCTCGTTGCTGAACACCAACTACGTTAGCCGTCAGGATTACGCCACCTCGCGCACCCAg                                                                                                                >  1:318576/1‑150 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCCGGCATCGTTGCTGAAGACCAACTCCGTTCGCCGTCAGGCTTACGACACcgcg                                                                                                                         >  3:707447/1‑141 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTAc                                                                                                                                  >  4:533128/1‑132 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACcgcg                                                                                                                         >  3:715716/1‑141 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGGACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACa                                                              >  2:456140/1‑200 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCCGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACa                                                              >  2:730758/1‑200 (MQ=255)

                                                                                                                                       ccTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAg                                                                                                                >  1:563920/1‑150 (MQ=255)

                                                                                                                                         tttACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCCGTTGAACAgg                                                            >  2:597557/1‑200 (MQ=255)

                                                                                                                                          ttACAGGCCGAGCTACACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTATCGCCAGCACTGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGAACAACTACGTTAGCCGTCAGGCTTACGACACCGCGCGCACCCAGTtg                                                                                                             >  1:52090/1‑150 (MQ=255)

                                                                                                                                          ttACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGACAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTTAAGACCAACTACGTTAGCCGTCAGGATTACGACACCCCGCGCACCCAGTtg                                                                                                             >  1:662720/1‑150 (MQ=255)

                                                                                                                                             cAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTtgaat                                                                                                          <  1:85238/150‑1 (MQ=255)

                                                                                                                                               ggCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTtgaatga                                                                                                        <  1:366950/150‑1 (MQ=255)

                                                                                                                                                   gAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGACGACCAACTACGTTAGCCGTCAGGCTTACGACTCCgcgcgc                                                                                                                      >  4:662335/1‑132 (MQ=255)

                                                                                                                                                     gCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCAc                                                                                                                    >  4:464885/1‑132 (MQ=255)

                                                                                                                                                     gCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACCACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTtgaa                                                                                                           >  3:28271/1‑141 (MQ=255)

                                                                                                                                                        aaaCTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCCTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGc                                             >  2:504860/1‑200 (MQ=255)

                                                                                                                                                         aaCTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGcc                                                                                              <  1:294076/150‑1 (MQ=255)

                                                                                                                                                             ccGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATAc                                        >  2:271774/1‑200 (MQ=255)

                                                                                                                                                              cGCC‑AAAGGCTCGCTGGCGAGAGCGCTCTCTACCTCCAGCAATGACCGCATCACCTTTAACCGCCAGGCATCGTTACTGAAGACCAAATACGTTAGCAGTCAGGATTAAGACAGCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGt                                                                                         <  1:617138/150‑1 (MQ=255)

                                                                                                                                                              cGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTATGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATAcg                                       >  2:779824/1‑200 (MQ=255)

                                                                                                                                                               gCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATAcgc                                      <  2:741358/200‑1 (MQ=255)

                                                                                                                                                                 c‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTtgaatga                                                                                                        <  4:512336/132‑1 (MQ=255)

                                                                                                                                                                     aGGCTGGCTGGCGAACGCGCTCTCTACCGCCAGCAATGGCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGc                                                                                                     <  4:425641/132‑1 (MQ=255)

                                                                                                                                                                      ggCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTc                                                                                  <  1:344037/150‑1 (MQ=255)

                                                                                                                                                                                cGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATg                                                                                          <  4:230789/132‑1 (MQ=255)

                                                                                                                                                                                  aaaGCGCTCTCTACCGCCAGCAATGCCTGCATCAGCTTGAACCGCCAGTCATCGTTGCTGAAGACCAACTACGTTAGCCGTCATGATTACGACACCTCGCGCACCGAGTTGAATGAAGCAGAAGCCAATGTc                                                                                        <  4:432360/132‑1 (MQ=255)

                                                                                                                                                                                        ctctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCg                                                                         >  3:87061/1‑141 (MQ=255)

                                                                                                                                                                                          ctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAATACCAACTACTTTCGCCGCCAGGATTACGACACCCCGCGCACCCAGCTGCCTGACGCACCCGCCAATGTCACCGACGc                                                                                >  4:309143/1‑132 (MQ=255)

                                                                                                                                                                                          ctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGc                                                                                >  4:487257/1‑132 (MQ=255)

                                                                                                                                                                                          ctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGc                                                                       <  3:311451/141‑1 (MQ=255)

                                                                                                                                                                                          ctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCg            >  2:295182/1‑200 (MQ=255)

                                                                                                                                                                                          ctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCg            >  2:2795/1‑200 (MQ=255)

                                                                                                                                                                                          ctctACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCg            >  2:636253/1‑200 (MQ=255)

                                                                                                                                                                                              aCCGCCAGCAATGCCAGCATCACCTCTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCCCCCAGTTGAAGGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGcg                                                          <  1:236088/150‑1 (MQ=255)

                                                                                                                                                                                                cGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATc                                                    >  2:441219/1‑154 (MQ=255)

                                                                                                                                                                                                    aGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAg                                                             >  3:53116/1‑141 (MQ=255)

                                                                                                                                                                                                    aGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCGTCAGCGGGaa  >  2:105767/1‑200 (MQ=255)

GAATTGCCCGGTAGAACCGTTCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCC‑AAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCGTCAGCGGGAA  >  NC_000913/3659382‑3659776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.