Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4251385	4251993	609	33 [30]	[25] 31	yjbI	pseudogene, SopA‑related, pentapeptide repeats‑containing

CTTATCGATCAGGCCTTACGATCAACGGATGATATGATCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTT  >  NC_000913/4251867‑4252193                                                                                                                                |                                                                                                                                                                                                        cTTATCGATCAGGCCTTACGATCAACGGATGATATGATCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCttt                                                                                                                                                                                                     >  3:114744/1‑132 (MQ=255)                        aaCGGATGATATGATCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAatat                                                                                                                                                                     <  1:234604/141‑1 (MQ=255)                                    gatCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGata                                                                                                 >  2:667364/1‑197 (MQ=255)                                                      gCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTAt                                                                                                                              >  4:501373/1‑150 (MQ=255)                                                            ttATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCgatga                                                                                                                                          >  3:463469/1‑132 (MQ=255)                                                                             gTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTAtggtgg                                                                                                                         >  3:226091/1‑132 (MQ=255)                                                                              tAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCt                                                    >  2:414708/1‑200 (MQ=255)                                                                                   atgatgTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGata                                                                                                 <  4:667297/150‑1 (MQ=255)                                                                                        gTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCAACGTATATCTACAAATCCAg                                          >  2:306741/1‑200 (MQ=255)                                                                                                        taGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTa                                                                                     >  1:366704/1‑141 (MQ=255)                                                                                                             aCTGAAGATAATTTACGAACCTTTAACACGAATGAATTAACACGAAACGataata                                                                                                                                                                      <  4:668208/55‑1 (MQ=255)                                                                                                             aCTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGataata                                                                                                                                                                      >  2:668275/1‑55 (MQ=255)                                                                                                             aCTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAAGCCTACAAAAGATACCAAt                                                                       >  4:428890/1‑150 (MQ=255)                                                                                                                gAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCg                                                                                                                                              <  4:171585/76‑1 (MQ=255)                                                                                                                gAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCg                                                                                                                                              >  2:171596/1‑76 (MQ=255)                                                                                                                  aGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATcc                                                                                                                                                             >  4:227575/1‑59 (MQ=255)                                                                                                                  aGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATcc                                                                                                                                                             <  2:227594/59‑1 (MQ=255)                                                                                                                     tAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTtc                                                                                                                                                        <  3:293224/61‑1 (MQ=255)                                                                                                                     tAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTtc                                                                                                                                                        >  1:293242/1‑61 (MQ=255)                                                                                                                     tAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATATTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTc             >  2:238341/1‑200 (MQ=255)                                                                                                                      aaTTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTtc                                                                                                                                                        >  2:72870/1‑60 (MQ=255)                                                                                                                      aaTTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTtc                                                                                                                                                        <  4:72862/60‑1 (MQ=255)                                                                                                                        tttAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTg                                                                     >  1:516107/1‑141 (MQ=255)                                                                                                                        tttAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCAc                                                            >  4:596703/1‑150 (MQ=255)                                                                                                                        tttAAGAACCTTTAACACGAATGAATCAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGa                                                                              >  3:73214/1‑132 (MQ=255)                                                                                                                                ccTTTAACACGAATGAATTAACACGAAACGATAATATc                                                                                                                                                                    >  2:702712/1‑38 (MQ=255)                                                                                                                                ccTTTAACACGAATGAATTAACACGAAACGATAATATc                                                                                                                                                                    <  4:702635/38‑1 (MQ=255)                                                                                                                                ccTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAAtt                                                                      >  3:279208/1‑132 (MQ=255)                                                                                                                                ccTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCt                                                    >  4:237889/1‑150 (MQ=255)                                                                                                                                ccTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATgaga                                  >  2:648301/1‑168 (MQ=255)                                                                                                                                ccTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACtt  >  2:301654/1‑200 (MQ=255)                                                                                                                                |                                                                                                                                                                                                        CTTATCGATCAGGCCTTACGATCAACGGATGATATGATCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTT  >  NC_000913/4251867‑4252193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.