| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | 34949 = | 2119 (1.010) | 215 (0.110) | 118/228 | 21.9 | 10.3% | intergenic (+53/+113) | JCVSYN2_00105/JCVSYN2_00110 | ABC transporter permease/cell division protein FtsH |
| ? | CP016816 | = 34945 | 1818 (0.950) | intergenic (+49/+117) | JCVSYN2_00105/JCVSYN2_00110 | ABC transporter permease/cell division protein FtsH | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 522 total aligned reads displayed.
AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP016816/35087‑34949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttt‑tttttt‑t‑‑ttCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAGTAAA < CP016816/34945‑34819 AAGACGAAGTATATAAAGACATAAAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑T < 2:875484/128‑1AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑T > 2:3693829/1‑128AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑T > 1:3691117/1‑128AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑T > 2:3777017/1‑128AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑T < 2:3734860/128‑1AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAAATATATTA‑T > 1:1267714/1‑128 atAAGAATAATATAAATACAAATAATAATATAAAAAAAAAACCAATATTTATAACTATTTGTTTTTTAAATTTACTCCTTAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TT < 2:3914262/126‑1 AGAAGAATAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTTAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TT < 2:1080713/128‑1 AGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTTAATAATTATTTGAAAAACAATTTTTTATAGTATGAAAATTATATTA‑TT > 1:2860460/1‑128 AGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TT > 1:916017/1‑128 AGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TT > 2:2506086/1‑128 AGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTATAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGAATGCAAATTATATAA‑TT > 2:2707151/1‑128 AGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAAATCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATTAAAATTATATTA‑TT > 1:4118650/1‑128 tAAGAATAAGATAAAGACAAATAATAATATAAACAAAAAACCAATATTTATAACTCTTGGTTTTTTAAATTTACTACTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT < 1:3956797/127‑1 GAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT > 2:4344695/1‑128 GAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT > 1:1773080/1‑128 GAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT < 2:4487979/128‑1 AAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑T > 2:490656/1‑128 AGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TT > 1:2504794/1‑128 AGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TT > 1:3309844/1‑128 AGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TT > 2:2106639/1‑128 AGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCAGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TT > 2:1667456/1‑128 AGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCATGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTAAATTA‑TTT‑TT > 1:3122325/1‑128 AGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGATTTTTAAATTTACTCATGAATACTTATTTGAAAAACAATTTTTAATAGTATGCAAATTATATTA‑TTT‑TT > 2:4175187/1‑128 GAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTT > 2:4027622/1‑128 GAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTT > 2:2576519/1‑128 GAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTT > 1:1330257/1‑128 AAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑ATTT > 2:2289344/1‑128 AAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAAAAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTT > 2:1378040/1‑128 AAGAAACTAAAGACAAATAATAATAAAAACAAAAAACCAATATTTATAACTCTTTGTTTTTTAAATTTAATACAGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTT < 2:2890042/128‑1 AGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTT > 1:526826/1‑128 AGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TATTT > 1:3801866/1‑128 gaactaAAATACAAATAATAATATAAAAAAAAAACCAAGATTTATAACTATTGGTTTTTTAAATTTACTCCTGAATACTTATTTTAAAAACAATTTTTTATAGTATGCAAATTATATTT‑TTT‑TTTTTT < 1:493106/122‑1 AAGATAAAGTAAAATAATAATATAAAAAAAAAACCAAGATTTATAACTATTGGTTTTTTAAATTTACTCCTGAATACTTATTTGTAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T < 2:2662033/128‑1 AAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T > 1:3359289/1‑128 AAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T > 2:2195363/1‑128 AAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGAAAATTATATTA‑TTT‑TTTTTT‑T > 2:4133990/1‑128 AAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTAATTGAAAAACAATTTTTTATAGTAAGCAAATTATATTA‑TTT‑TTTTTT‑T > 2:639279/1‑128 AGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑T > 1:1397678/1‑128 GATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATTCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TT > 2:2382019/1‑128 GATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TT < 2:1617600/128‑1 CAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGT < 2:3056738/128‑1 TAATAATATAAAAAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAAT < 2:2462488/128‑1 ATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATTCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TTTAAaatataaaaaa > 1:1677662/1‑117 ATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATTCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TTTAAaaaataaaaaa > 1:2638297/1‑117 CAAAAAACCAATATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATAATTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAA < 1:4074017/128‑1 CAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAA < 2:3286742/128‑1 AAACCAAGATTTATAACTATTGGTTTTTTAAATTTAATCCTGAATACTTATTTGAAAAACAATTTTTTATATTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACA < 1:4427371/128‑1 CAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTAAATAGTAAATAAAAAAA‑CCAAACACAATGT > 2:4256992/1‑128 gagTTATAAATTTTGGTTTTTTAAATTTACTAATTAATACTTATTTTAAAAACAATTTTTTATATTATTCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATT < 2:4093774/125‑1 GATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTAAATATTAAATAAAAAAA‑CCAAACACAATGTATT > 2:3095314/1‑128 GATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTTATTTTTTAT‑‑TTCAAAAAAAAAAAAAAAAA‑CAAAACAAAATTTAT > 1:2073815/1‑128 TTTATAACTCTTTGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TTTAATATTTAATAAAAAAACCCAAACAAAATTAATTTG > 1:781259/1‑128 TATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTAAATATTAAATAAAAAAA‑CAAAACAAAATTTATTTGGT > 2:701631/1‑128 TATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TTAAATATTAAATAAAAAAA‑CCAAAAAAAATTTATTTGTTT > 1:460248/1‑128 ATAACTCTTGATTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTAAATATTAAATAAAAAAA‑CCAAACAAAATTTTTTTTGTT > 2:799596/1‑128 TAACTCTTGGATTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTATTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATATTAAAAAAAAAAA‑ACAAACAAAATATAgatgtttt > 2:925117/1‑120 ACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATATTAAATAAAAAAA‑CCAAAAACAATTTATTTGGTTTAA > 1:660173/1‑128 CTTTGTTTTTATAATTTACTTCTGAATACTTATTTGAAAAACAATTTTTTATAGTATTCAAATTATATTA‑TTT‑TTTTTTAT‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCT < 2:1258586/128‑1 tttGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAAAAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTT < 1:3617179/125‑1 TGGTTTTTTAAATTTACTCCTGAATACTTATTAGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATATTAAATAAAAAAA‑CCAAACACAATGTATTTGTTTTAATaatt > 1:4154566/1‑124 GGTTTTTTAAATTTTCTCCTTTATTCTTATTTGAAAAACAATTTTTTTTAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTT < 1:1887313/128‑1 GTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTA > 2:600172/1‑128 TTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTAT < 2:3631983/128‑1 TTTAAATTTACTACTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTAT < 2:3192759/128‑1 ttaataCTGAATTATTATTTTTAAAAAAATTTTTTATATTATTGAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAA < 2:1199715/122‑1 ctaCTGAATACTTATTTGAAAATAAATTTTTAATTGTTAGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTT < 1:2992821/125‑1 ttttatTTATTTTAAAAACAATTTTTTATTTTATTTAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑ACAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTT < 1:2241572/122‑1 GAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTAAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATATTTTATTATTCATAAACTTCACTT > 1:3992769/1‑128 TTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATATTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATATTTTATTATTAATAAACTTCACTTAGCATT > 2:2823017/1‑128 TTGAAAAACATATTTTTATAGTATGAAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTAC < 2:4037359/128‑1 gacAAACATTTTTTTATAGTATTCAAATTATATTA‑TTT‑TTTTTT‑TTATTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACATAGCATTGTACT < 2:1289144/125‑1 tttttttttTATTCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCAT < 1:1001339/119‑1 TAGTATGCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTA < 2:1957182/128‑1 GCAAATTATATTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTACCATTGTAATTTGTTCAGCATTTCTTACTCTTT > 2:2777250/1‑128 AATTATTTTATTTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTG < 2:4419879/128‑1 tttaatgTTT‑TTTTAA‑T‑‑TTCAATAGTAAATAAAAACA‑CCAAACCCAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTCGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGA < 2:2971869/121‑1 TTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAATTAT‑CAAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCAT < 1:4303601/128‑1 TTT‑TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCAT < 2:1524849/128‑1 TT‑TTTTTT‑T‑‑TTCAATAGTTAATAAAAAAT‑CCAAACACATTGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATA < 1:2411318/128‑1 T‑TTTTTT‑T‑‑TTGAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAA < 2:203656/128‑1 T‑TTTTTT‑T‑‑TTCAATAGTAAATAATAAAA‑CCAAACACTATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAA < 2:1876684/128‑1 TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCATCTTCACTTTGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAA < 1:1075497/128‑1 TTTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAA < 2:4547887/128‑1 TTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCTAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGGATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAG < 1:390272/128‑1 TTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATGTTTTTTTTTTCATAAAATTCAATAAGCATTGTACTTGGTTCCTAATTTCTTAATCTTTTTGTTGAAACTAATAAAG > 2:3575335/1‑128 TTTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAG < 1:1164397/128‑1 TTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACACTGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGA < 2:1789483/128‑1 TTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGGAACTCATAAAGA < 1:2892505/128‑1 TTTT‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGA < 1:2190038/128‑1 TTTT‑T‑‑TTAAATAGTATATAAAAAAA‑TCTATCACAATTTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGA < 1:2764166/128‑1 TT‑T‑‑TTAAATAGTAAATAATAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCATCTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAG < 2:3427781/128‑1 TT‑T‑‑TTAAATAGTAAATAAAAAAA‑CCAAACAAAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAG < 1:1531091/128‑1 T‑T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTAATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTATTAATCTTTTTTTTGAAACTCATAAAGAAGT > 2:3458090/1‑128 T‑‑TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAAATTCACTTAGCATTTTACTTGGTTCAGCATTTATTACTCTTTTTGTTGAAACTCATAAAGAAGTA > 1:3459919/1‑128 TTCAATAGTAAATAATAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTAAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAGTAA < 1:229375/128‑1 TTCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAGTAA < 1:421439/128‑1 TCAATAGTATATAAAAAAA‑ACAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAGTAAA < 1:1442408/128‑1 TCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAAAATCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTATTTTTTTTTAAACTAATAAATAAGTAAA > 1:450014/1‑128 TCAATAGTAAATAAAAAAA‑ACAAACACAATGTATTTGTTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAGTAAA < 2:830756/128‑1 AAGAAGAAGAAGATAAAGACAAATAATAATATAAACAAAAAACCAAGATTTATAACTCTTGGTTTTTTAAATTTACTCCTGAATACTTATTTGAAAAACAATTTTTTATAGTATGCAAATTATATTA‑TTT‑TTTTTT‑T‑‑TT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP016816/35087‑34949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttt‑tttttt‑t‑‑ttCAATAGTAAATAAAAAAA‑CCAAACACAATGTATTTGGTTTAATCTTTTATTATTCATCAACTTCACTTAGCATTGTACTTGGTTCAGCATTTCTTACTCTTTTTGTTGAAACTCATAAAGAAGTAAA < CP016816/34945‑34819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |