New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 34949 =2119 (1.010)215 (0.110) 118/228 21.9 10.3% intergenic (+53/+113) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
?CP016816 = 34945 1818 (0.950)intergenic (+49/+117) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2156 total aligned reads displayed.

CTTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCT  >  CP016816/34818‑35071
                                                                                                                                |                                                                                                                               
 tttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTTTGTTTGTTTTTTTTATTTACTA‑TTG‑a                                                                                                                               >  2:1401050/1‑128 (MQ=255)
 tttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑a                                                                                                                               >  2:422773/1‑128 (MQ=255)
     cttattTATGAGTTTCAACAAAAATCGTAATAAATGATGAACCAATTAAAATGCTAAGGGAATTTTATTAATAATAAAACATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTT‑aaaaa                                                                                                                           <  1:795022/128‑1 (MQ=255)
            attaGTTTCAACAAAAATAGTAAGAAATGTTTAACCAATTAAAATGATATTTTAATTTGATTAATAATAAAACATTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTACTT‑TTG‑aaaaaaaaaaaa                                                                                                                    <  2:1543796/125‑1 (MQ=255)
            aTGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑aaaaaaaaaaaa                                                                                                                    >  2:433869/1‑128 (MQ=255)
                gTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTTTGTTTGATTTTATTATTTACTA‑TTG‑aaaaaaaaaaaaaaaa                                                                                                                >  2:3089166/1‑127 (MQ=255)
                gTTTAAACAAAAAGAGTAATAAATGCTTAACCAAGTACAATGCTAAGTGATGTTGATGAATAATAAAAGATTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTAATA‑TTT‑aaaaaaaaaaaaaata                                                                                                                <  1:445311/128‑3 (MQ=255)
                    caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑aaaaaaaaaaaaaaaaaaat                                                                                                            >  2:3318416/1‑126 (MQ=255)
                    caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAaa‑aatat                                                                                                           >  2:3670940/1‑128 (MQ=255)
                    caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGGTTTTTTATTTAATA‑TTG‑‑AAAAAAAAAAAAAataataa                                                                                                           >  2:2943860/1‑127 (MQ=255)
                      acaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTATGGTTTTTTTATTTACTA‑TTG‑‑‑AAAAAAAAAAAAataatataat                                                                                                        >  2:3164320/1‑128 (MQ=255)
                       caaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAaa‑aaaataat                                                                                                        >  1:2528834/1‑128 (MQ=255)
                        aaaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑aaaaaaaaaaaaataaaaaaaatt                                                                                                        >  2:2674459/1‑117 (MQ=255)
                          aaatattaataaATTCTAAACCAATTAAAATTGTTATTTAATTTTATTAAAAAAAAAATATTAAACAAAATAAATTTTGTTTGGTTTTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTg                                                                                                     <  1:1144006/122‑1 (MQ=255)
                          aaaGAGTAATAAATGCTTAACAAATTAAAATGCTAATTGAAGTTGATTAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTg                                                                                                     <  1:4309214/128‑1 (MQ=255)
                          aaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAATAATATAAttt                                                                                                      >  2:1271925/1‑128 (MQ=255)
                            agagTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCa                                                                                                   >  2:3944751/1‑128 (MQ=255)
                              agTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACAAAATACATTGTTTTTCTATTTTTAATTTACTA‑TAT‑AAAAAAAAaaaaaaataaaaaaatataaaa                                                                                                  >  1:2011367/1‑122 (MQ=255)
                                 aaaaaaTTCTTAAACAATTAAAATTCTAATTTAATTTTATTAAAAATAAAATAATAAACCAAATAAATTGTGTTTGGTTTTTTTATTTACTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACta                                                                                              <  2:1613541/125‑1 (MQ=255)
                                 aaGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACta                                                                                              >  2:4397197/1‑128 (MQ=255)
                                 aaGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑ATG‑‑AAAAAAAAAAAAAATAATATAATATGCataata                                                                                              >  1:2910532/1‑128 (MQ=255)
                                  attattgatGAACAATGTAAAATTCTAAGTTAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAATA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACtat                                                                                             <  1:236655/120‑1 (MQ=255)
                                   gAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAAAAATATAATTTGAATACtaa                                                                                             >  1:3619330/1‑127 (MQ=255)
                                   gAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTTAATAAtata                                                                                            >  1:917575/1‑128 (MQ=255)
                                    aaaTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATTCATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTTCTTAatatta                                                                                           >  1:3157615/1‑126 (MQ=255)
                                    aaaTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAA‑AATATAAtttaaataataaaa                                                                                           >  1:642410/1‑117 (MQ=255)
                                      aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTAGGTTTTTTTATTTACTA‑TTGAAAAAAAAAAAAAAAATAATATAATTTGCATaaaaaaa                                                                                           >  1:4142380/1‑122 (MQ=255)
                                       tGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTT‑TTG‑‑AAAAAAAAAAAAAATAATATATTTTGCATACTATaaaaa                                                                                        >  2:3553593/1‑128 (MQ=255)
                                        gCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAA‑AATATAATTTGCATACATTaaaaaa                                                                                       >  2:4465249/1‑128 (MQ=255)
                                         cttaaCCAATTACAATGATAATTGAATTTTATGAATAATAAAATATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAATA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAAt                                                                                      <  2:2768688/125‑1 (MQ=255)
                                               cAAGTACAATGCTAATTGAAGTTTATTAATAATAAAATATTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTACTA‑TT‑‑‑TAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGttttt                                                                               <  1:4090673/128‑1 (MQ=255)
                                                aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTTCAAACTATAAAAAATTGttttt                                                                               >  2:780865/1‑128 (MQ=255)
                                                  gTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGAATACTATAAAAAATTGTTTTTCa                                                                             >  2:480210/1‑128 (MQ=255)
                                                  gTAAAATGATAATTTAATTTGATTATTATAAAAATATTAAAAAAAATAAATTTTTTTTGTTTTTTTTATTTAATT‑TTT‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTc                                                                              <  2:2425834/128‑1 (MQ=255)
                                                       aTGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTAAAATaa                                                                        >  2:1989523/1‑128 (MQ=255)
                                                       aTGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑‑AAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAg                                                                       >  2:2576209/1‑128 (MQ=255)
                                                          cTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAAATTGAATACTATAAAAAATTGTTTTTAAAATAATTa                                                                     >  2:3223239/1‑128 (MQ=255)
                                                          cTAAGTGAAGTTGATGAATAAAAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAATAATAAAATTTGAAAAATATAAAAAATTTTTTTACaaaaaaat                                                                      >  2:3488820/1‑126 (MQ=255)
                                                             aGTGAATTTTATTAATAATAAAATATTAAACAAAATAAATTTTGTTTGGTTTTTTTATTTACTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTc                                                                  <  2:1478829/128‑1 (MQ=255)
                                                              gTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGAATACTATAAAAAATTGTTTTACAATTAATTATACa                                                                 >  2:2203883/1‑128 (MQ=255)
                                                                gAATTTGATTAATAATAAAATATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAgg                                                               <  1:2612594/128‑1 (MQ=255)
                                                                 aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAATAAATAAAATTTGCATAATATAAAAATTTTTTTATCAAATAAatataaatg                                                               >  2:2885195/1‑123 (MQ=255)
                                                                 aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATATATTGCATAATATAAAAAATTTTTTTAAAAAAAATTAtaaaaaa                                                              >  2:849063/1‑122 (MQ=255)
                                                                 aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAAAAAAATTTGCATAATATAATAAATTGTTTTTAAAAAAAGTATACTGGa                                                              >  2:1706711/1‑128 (MQ=255)
                                                                 aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑‑AAAAAAAAAAAAATAATATAATTTGCTAACAATTAAAAATTTATTTTCAAATAAGTATTCAGTAg                                                             >  1:2992821/1‑128 (MQ=255)
                                                                  agtttttgaATAATAAAATATTAAACAAAATTCATTGTGTTTTGTTTTTTTATTTACTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAg                                                             <  2:231720/122‑1 (MQ=255)
                                                                    tttttaaaaaataaAATTATAAAAAAAATAAATTTTGTTTTGTTTTTTTATTTAAAA‑TTT‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGt                                                            <  2:204891/119‑1 (MQ=255)
                                                                    ttGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAAAATAATTTTAAAAAAATAAAAAATTTTTTTTAAAATAAATAttaaataata                                                           >  1:1659546/1‑120 (MQ=255)
                                                                      tattaataataaaataataaAAAAAATACATTGTGTTTGGTTTTTTTATTTAATA‑TTT‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTaa                                                          <  2:3869446/124‑1 (MQ=255)
                                                                      gatgaATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTGAAAAAAAAAAAAAAAATAATAAAATTTGCAAACTAAAAAAAATTTTTTTTAAAAAAATTAtactgtatta                                                           >  1:1081775/1‑119 (MQ=255)
                                                                        ttaataatAAATTATTAAAACAAATATTTTGTTTTTGGTTTTTTTATTTAATT‑TTT‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAAt                                                        <  2:1112078/126‑1 (MQ=255)
                                                                            taataaAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGTAGTAAATTTaaa                                                   >  1:3906173/1‑128 (MQ=255)
                                                                                aaaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAAATTAATTTGAATAATAAAAAAAATTTTTTTAAAAAAAAAAAATCAGTAATAAATTTaaaaaaa                                               >  2:1791283/1‑127 (MQ=255)
                                                                                 aaaTATAAAACAAAATAAATTTTTTTTTTTTTTTTTATTAA‑‑A‑TTT‑TTAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCa                                             <  2:1185896/128‑1 (MQ=255)
                                                                                  aattttAAACAAAATAAATTGTTTTTGTTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCa                                             <  1:3998111/124‑1 (MQ=255)
                                                                                  aaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAAAAATATAATTTGAATAATATAAAAAATTTTTTTTCAAATAAGTATTCAGTATTAAATTTaaaaaaac                                              >  2:2818907/1‑126 (MQ=255)
                                                                                  aaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAAAAAAATTTGAATAATATAAAAATTTTTTTTTAAAATAATTATTAAGTATTAAATTTAAAAAAcaa                                             >  1:1315014/1‑126 (MQ=255)
                                                                                   ataTTAAAACAAATAAATTTTTTTTGGTTTTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAATATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCaa                                            <  2:1030331/126‑1 (MQ=255)
                                                                                    ttttAAACCAAATAAATTGTGTTTGGTTTTTTTATTTAATT‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAag                                           <  2:671170/126‑1 (MQ=255)
                                                                                    taTTAAACAAAATAAATTGTGTTTGTTTTTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAag                                           <  1:1423786/127‑1 (MQ=255)
                                                                                    taTTAAAACAATTACATTGTGTTTGGTTTTTTTATTTAATA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAag                                           <  1:2822857/127‑1 (MQ=255)
                                                                                     aTTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTTTTTTTAAAATAATTATTAAGGAGTAAATTTAAAAAACAAaga                                          >  2:4529866/1‑128 (MQ=255)
                                                                                     aTTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTAAATAATAAAAAAAAATTTTTTAAAAATAATAATTAAGAAATAAATTTAAAAAACaaaaa                                          >  1:3337494/1‑126 (MQ=255)
                                                                                     aTTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTACTATTTA‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCaa                                            <  2:2512276/128‑1 (MQ=255)
                                                                                       tAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATATTTTGAAAAATATAAAAATTTTTTTTAAAAATAATTTTAAAGGAGAAAATTAAAAAAAcaataatt                                        >  2:4094076/1‑121 (MQ=255)
                                                                                       tAAACCAAATAATTTGTGTTTGGTTTTTTTATTTA‑AA‑TTT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGt                                        <  2:4170530/128‑1 (MQ=255)
                                                                                        aatctatatttaTTGTTTTTTGTTTTTTTATTTATTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGtt                                       <  1:2715748/117‑1 (MQ=255)
                                                                                        aaaacatctataTTTTGTTTGTTTTTTTTTTTTAATA‑TTG‑‑‑AAAAAAAAAAAAATAATATAATTTGCATACTATAATAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAATCCAAGAGTta                                      <  2:925117/117‑1 (MQ=255)
                                                                                         aaacAAATAATTTTTGTTTGTTTTTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTta                                      <  2:3415402/125‑1 (MQ=255)
                                                                                           ccAAATATATTGTGTTTGTTTTTTTTATTTACAA‑TTG‑‑AAAAAAAAAAAAAATTATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                    <  2:2117068/128‑1 (MQ=255)
                                                                                            cAAATACATTTTGTTTTGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATAAAATTTAAATAAAATAAAAAATTTTTTTAAAAATAATTAATCATTATTAAATTTAAAAAACAAAATATTATaa                                   >  1:3533396/1‑128 (MQ=255)
                                                                                             aaaTACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAATAATATAATTTGAAAAATATAAAAAATTTTTTTTAAAATAATTATTAAGTATTAAATTTAAAAAACAAAAATTTATaa                                   >  1:4395655/1‑128 (MQ=255)
                                                                                             aaaTACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAA‑AA‑AAAATTTGAATAATATAAAAAATTTTTTTAAAAATAATAATTAAGAATAAAATTAAAAAAACAAATATTAATAAAt                                 >  1:564130/1‑128 (MQ=255)
                                                                                             aaaTACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATATTTTGAATAGTATAAAAAATTGTTTTTAAAAAAATTATTAAGGTTTAAATTTAAAAAAACAagttatttaat                                  >  2:582785/1‑119 (MQ=255)
                                                                                             aaaTACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑‑AAAAAAAAAAAAATAATATAATTTTAATAATAAAAAAAATTTTTTTTCAAATAATTATTAAATATTAAATTTAAAAAACAAAAATTAATAAAt                                 >  1:1567214/1‑128 (MQ=255)
                                                                                             aaaTACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑‑‑AAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAATTATTAAGGAGTAAATTTAAAAAACCAAGAGTTATAAAt                                 >  1:476965/1‑128 (MQ=255)
                                                                                              aaTAAATTGTGTTTGGTTTTTTAATTTACTA‑TTG‑‑‑AAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATAACTc                                <  1:1746024/128‑1 (MQ=255)
                                                                                                caCAATGTATTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGAATAAAATAAAAAATTTTTTTTAAAATAATTATTCAGGATAAAATTTAAAAAACAAAAATTTAAAAAtat                               >  1:3072313/2‑126 (MQ=255)
                                                                                                      ttgttttgtttTTTTATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                         <  1:3721013/127‑1 (MQ=255)
                                                                                                       tgttttgtttTTTTATTTACTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGtttt                        <  1:2097576/128‑1 (MQ=255)
                                                                                                       tgtTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAATAATATAATTTGCATAATTTAAAAAATTTTTTTTAAAATAATTATTCAGTATTAATTTTAAAAAACAAAAATTTATAATTATTGtttt                         >  2:403428/1‑128 (MQ=255)
                                                                                                       tgtTTGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAATTATTAAGTATTAAATTTAAAAAACCAATAGTTATAAATCTTGTtttt                        >  2:1338750/1‑128 (MQ=255)
                                                                                                       tatttGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTTCATAATATAAAAAATTGTTTTTAAAATAAGTATTCAGTAGTAAATTTAAAAAACCAATAGTTATAAATCATGGtttt                        >  1:2262246/3‑128 (MQ=255)
                                                                                                         tttGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAATAATTGTTTTTCAAAAAAGTATTCACGAGTAAATTAAAAAAACAAAGATTAATAAATCTTAGtttttt                      >  2:3016240/1‑128 (MQ=255)
                                                                                                           tGGTTTTTTTATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTTAATTTAAAAAACCAAGAGATATAAATCTTGCTTTTTTGt                    >  1:1001134/1‑128 (MQ=255)
                                                                                                              ttttttttttttCAA‑TAG‑TAAATAAAAAAAAAATAATATAATTTGGATAATATAAAAAATTTTTTTTCAAATAAGTATTAAGGATTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGttt                  >  2:3760230/1‑128 (MQ=255)
                                                                                                              tttttttATTTACTA‑TTG‑‑AAAAAAAAAAAAAATAATAAAATTTGCATAATAAAAAAAATTTTTTTAAAAATAATAATTCAGGATTAAATTTAAAAAACCAAAAGTTAAAAATAATAGTTTTTTGttaa                 >  1:1229711/1‑126 (MQ=255)
                                                                                                              tttttttATTTAATA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTta                 <  2:1925060/128‑1 (MQ=255)
                                                                                                               ttttttATTTAATA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTtat                <  1:4521693/128‑1 (MQ=255)
                                                                                                               ttttttATTTAATA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTGTAAATCTTGGTTTTTTGTTtat                <  2:362736/128‑1 (MQ=255)
                                                                                                                tttttATTTACTA‑TTGAAAAAAAAAAAAAAAATAAAATAATTTTCATAATATAAAAAATTTTTTTTAAAATAATTATTAAGGATTAAATTTAAAAAACAAATAATTATAAATATTGGTTTTTTTTTta                 >  1:1501955/1‑128 (MQ=255)
                                                                                                                 ttttATTTATTA‑TT‑‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTatat              <  1:3821851/128‑1 (MQ=255)
                                                                                                                 tttaatttaaTA‑TT‑‑TAAAAAAAAAAATAATAATATAATTTGCATAATATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTatat              <  1:2188950/128‑1 (MQ=255)
                                                                                                                       ttaCTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGATTAAATTTAAAAAACAAATAGTTATAAATATTGTTTTTTTGTTTAtattattat        >  2:1846102/1‑128 (MQ=255)
                                                                                                                       ttaCTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATAAATCTTGGTTTTTTGTTTAtattatttt        >  1:245641/1‑126 (MQ=255)
                                                                                                                       ttaCTA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGCATACAAAAAAAAATTTTTATTCAAAAAAGTATTCAGTAGTAAATTTAAAAAACCAAAATTTATAAATATTGTTTTTTTTTtaatattaatat        >  1:3434401/1‑128 (MQ=255)
                                                                                                                        taCTA‑TTG‑AAAAAAAAAAAAAAA‑AATATAATTTGCATAATATAAAAAATTGTTTTTAAAATAAGTATACAGGAGTAAATTTAAAAAACAAATATTTATAAATATTGTTTTTTTGTTTATattattatt       >  1:3666601/1‑128 (MQ=255)
                                                                                                                          cTA‑TTG‑AAAAAAAAAAAAAAATAAAATAATTTGAATAAAATAAAAAATATTTTTTCAAAAAAATATTAAGTAATAAATTAAAAAAACCAATAATTATAAAAATTGGTTTTTTTTTTatatttatattt      >  1:1960787/1‑128 (MQ=255)
                                                                                                                           tA‑TTG‑‑AAAAAAAAAAAAAATAATATAATTTGAATAATATAAAAAATTTTTTTTCAAATAATTATTAAGTATTAAATTTAAAAAACAAATATTTATAAATCTTGTTTTTTTGTTTATATTAtttttttt    >  1:4230377/1‑126 (MQ=255)
                                                                                                                              ttG‑AAAAAAAAAAAAAAAAAATAAAATTTGAATAAAAAAAAAAATATATTTTAAAATAATTATTAAGAATTAAATAAAAAAAACAAAAAATAATAAATATTATTTTTTTTTTTAATATATTAttttta   >  1:1858204/1‑125 (MQ=255)
                                                                                                                                |                                                                                                                               
CTTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTA‑TTG‑AAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCT  >  CP016816/34818‑35071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.