BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 34944	501 (0.550)	248 (0.280) +TAA	63/244	32.8	33.7%	intergenic (+48/+118)	JCVSYN2_00105/JCVSYN2_00110	ABC transporter permease/cell division protein FtsH
*	?	CP016816	34945 =	501 (0.550)	248 (0.280) +TAA	63/244	32.8	33.7%	intergenic (+49/+117)	JCVSYN2_00105/JCVSYN2_00110	ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 693 total aligned reads displayed.

CTTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTT  >  CP016816/34818‑35067

  ttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGAG‑TTT‑AGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑a‑a                                                                                                                                  >  2:1840221/1‑128 (MQ=255)

           ttccgatctCAACAAAAATATTAACAAATTCTTAACCAATTACAATGCTAATTTAATTTTATTAAAAATAA‑AATATTAAACAAAATACATTTTG‑TTT‑GGTTTTTTTA‑TTT‑ACTT‑TT‑‑‑T‑‑‑a‑aaaaaaaaaa                                                                                                                         <  2:623945/120‑1 (MQ=255)

           tATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑a‑aaaaaaaaaa                                                                                                                         >  1:1920857/1‑128 (MQ=255)

           tATGAGTTTAAACAAAAAGAGTAAGAAATGATGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACAAAATACATAGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑a‑aaaaaaaaaa                                                                                                                         >  1:453032/1‑128 (MQ=255)

            aTGTGTTTAAACAAAAATCTTAATAAATGCTTAACCAAGTACAATTCTAATTGAAGTTTATTAAAAATAA‑AAGATTAAACAAAAAAAATTGTG‑TTT‑GGTTTTTTTA‑ATT‑AATA‑TT‑‑‑G‑‑‑a‑aaaaaaaaaaa                                                                                                                        <  2:308065/128‑1 (MQ=255)

                    aaaaaaaaaTATTAATAAATGCTTAACAAATTAAAATGTTAATTGATTTTTATTAAAAAAAA‑AATATTAAACAAAAAAAATTTTT‑TTT‑GTTTTTTTTA‑TTT‑AATA‑TT‑‑‑T‑‑‑a‑aaaaaaaaaaa‑‑aaaataat                                                                                                              <  2:551276/124‑6 (MQ=255)

                     aacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑a‑aaaaaaaaaaa‑‑aataaaaaa                                                                                                             >  2:747154/1‑121 (MQ=255)

                      aaaaaaaTATTTAGAAATGTTTAACCATTTAAAATTTTAATTTATGTTTTTTAAAAATAA‑AATATTAAACAAAATTAATTGTT‑TTT‑GGTTTTTTTT‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAat‑aata‑‑‑t                                                                                                         <  1:548497/126‑1 (MQ=255)

                       caaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑a‑aaaaaaaaaaa‑‑aaaa‑aaaaaaa                                                                                                          >  1:213951/1‑123 (MQ=255)

                       caaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑TAAAAAAAAAA‑‑Aaa‑‑aata‑‑‑aa‑at                                                                                                     >  1:1636123/1‑128 (MQ=255)

                        aaaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAat‑aata‑‑‑ta‑a                                                                                                      >  2:428035/1‑128 (MQ=255)

                        aaaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAaa‑aaaa‑‑‑aa‑at                                                                                                     >  2:1455309/1‑128 (MQ=255)

                          aaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑T‑‑‑a‑aaaaaaaaaaa‑‑aaaa‑aaaaaataat                                                                                                       >  2:1658053/1‑120 (MQ=255)

                           aaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑Att                                                                                                    >  2:178772/1‑128 (MQ=255)

                            agagTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑a‑aaaaaaaaaaa‑‑aaaa‑aaaaaaaatttt                                                                                                     >  1:1119404/1‑118 (MQ=255)

                            aatttaataaATGCTTAACCAATTACAATGCTTATTTAATTTTATTAAAAAAAA‑AATATTAAACCAAATACAATTTG‑TTT‑GGTTTTTTTA‑TTT‑AAAA‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑Attt                                                                                                   <  2:1689751/124‑1 (MQ=255)

                               gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AAAT‑‑‑AA‑ATTTCCATa                                                                                              >  1:688580/1‑128 (MQ=255)

                                taataaATGCTTAACAAAGAACAATGCTAATTTAATTTTATGAAAAATAA‑AATATAAAACCAAATACTTTGTG‑TTT‑GGTTTTTTAA‑TTT‑ACAA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATa                                                                                              <  2:1409285/128‑1 (MQ=255)

                                 aaGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GG‑TTTTTTA‑TTT‑ACTATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑AA‑Attttaaaaaa                                                                                            >  2:114845/1‑121 (MQ=255)

                                  attaaTGCTGAAACAAATACAATTGTAATGTTATTTGTTTAATAATAA‑AATATTAAACCAAATACATTTTG‑TTT‑GGTTTTTTTT‑TTT‑AATT‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACta                                                                                           <  1:1770220/125‑1 (MQ=255)

                                  aaaaaTGATGAACAAAGTACAATGCTAAGTGAAGTTGTTTAATAATAA‑AATTTTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTT‑TTT‑AATA‑TT‑‑‑‑‑‑‑T‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACtat                                                                                          <  1:1006183/126‑1 (MQ=255)

                                    aaaTGCTTAACCAAGTAAAATTTTAAGTTAAGTTTATTAATAATAA‑AATATTAAACAAAATAAATTGTG‑TTT‑GGTTTTTTTA‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACtat                                                                                          <  2:1491509/128‑1 (MQ=255)

                                     aaTGCTGAACCTAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTTAATAatat                                                                                          >  2:649749/1‑128 (MQ=255)

                                     aaTGATCAACAAATTAAAATTCTAAGTTAATTTTATTAAAAAAAA‑AACATAAAACCAAATAATTTGTG‑TTT‑GGTTTTTTTA‑TTT‑AATT‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACtat                                                                                          <  2:100188/128‑1 (MQ=255)

                                      aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AAAA‑‑‑TA‑ATTTGCATACtata                                                                                         >  1:1477549/1‑128 (MQ=255)

                                      aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTTAATAATATaa                                                                                        >  1:911734/1‑128 (MQ=255)

                                      aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AAAA‑‑‑TA‑ATTTGCTTAATATaa                                                                                        >  2:1596735/1‑128 (MQ=255)

                                       tGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AAAA‑‑‑AA‑AATTAAAAAATATaaaa                                                                                      >  1:1387810/1‑128 (MQ=255)

                                             aCCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑TTTTGAATAATATAAAAAATTg                                                                                 >  1:520438/1‑128 (MQ=255)

                                              ccAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GTTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATATAAATAAAATaaaaaaattt                                                                                >  1:334034/1‑124 (MQ=255)

                                              ccAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTTAATAATATAAAAAAtttt                                                                                >  2:2724/1‑126 (MQ=255)

                                                  ttaaaaTGCTATTTGAATTTGTTTAATAAAAA‑AAAATTAAAAAAAAAACATTTTT‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TTTAAA‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGttt                                                                              <  2:834477/124‑1 (MQ=255)

                                                  gTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAA‑AAAA‑‑‑AATATTTTCAAAAAAAAAAAAATTAttttt                                                                            >  1:1240088/1‑128 (MQ=255)

                                                  gTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTGCATAAAATAAAAAATTTTTTTTc                                                                           >  2:86617/1‑128 (MQ=255)

                                                   tACAATGCTAAGGGAAGTTTTTTAAAAAAAA‑AATATTAAACAAAATAAATTTTT‑TTT‑GTTTTTTTTA‑TTA‑AATA‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGttttt                                                                            <  2:1341368/128‑1 (MQ=255)

                                                      aaTTCTAAGTTAATTTTTTTATTAATAA‑TATTTTAAACAAAAAAATTTTTT‑TTT‑GGTTTTTTTATTTT‑ATTT‑TT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCaaa                                                                        <  1:1968509/128‑1 (MQ=255)

                                                       aTGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTAAATAAAATAAAAAATTTTTTTTAAAAt                                                                       >  1:1729237/1‑128 (MQ=255)

                                                       aTGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑AA‑ATTTAAAAAAAAAAAAAATTTGTTTTACaaaa                                                                       >  2:208466/1‑127 (MQ=255)

                                                        tGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑‑‑‑AAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATAATATAAAAATTTGTTTTTCAAAT‑aatt                                                                  >  2:1863238/1‑126 (MQ=255)

                                                          cTAAGTTAATTTTTTGATTAAAAA‑AATTTTAAACAAATTAATTTGTT‑TTT‑GGTTTTTTTT‑TTT‑ATTATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑ATTA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAg                                                                   <  1:36064/128‑1 (MQ=255)

                                                          cTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGAATACTATAAAAAATTTTTTTTAAAAT‑aat                                                                   >  2:1625599/1‑127 (MQ=255)

                                                          cTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTGATAACTTTAAAAAATTGttttaaaattact                                                                    >  1:1049970/1‑119 (MQ=255)

                                                                taaGTTTATTAATAAAAA‑AATATTAAAAAAAAAAAATTTTT‑TTT‑GTTTTTTTTT‑TTT‑AATA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAg                                                            <  2:346308/127‑1 (MQ=255)

                                                                 atgTTTATTAATAATAA‑AATATTAAACCAAATAAATTGTT‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCa                                                             <  2:394169/126‑1 (MQ=255)

                                                                    ttttttattaataa‑AATATTAAACAAAATA‑ATTTTGTTTT‑GGTTTTTTTA‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAg                                                         <  2:1092869/120‑1 (MQ=255)

                                                                     tttattataataataataTTAAACCAAATAAATTGTG‑TTT‑TGTTTTTTTA‑TTT‑ATTT‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGa                                                          <  1:1271561/122‑1 (MQ=255)

                                                                      tttttatataaa‑aaTATTAAACAAAAATATTTTTG‑TTT‑GGTTTTTTTA‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTa                                                       <  2:507417/118‑1 (MQ=255)

                                                                       tttcctatcta‑aaGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTaa                                                      <  2:47464/118‑1 (MQ=255)

                                                                       atgaATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAATAAAAAAA‑‑AAATAAATA‑‑‑TA‑ATTTTCATAAAATAAAAAATTGTTTTACAATA‑Aattattatgtattaa                                                      >  1:1947835/1‑119 (MQ=255)

                                                                          aataaaAA‑AATATTAAACCAAATACATTTTG‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAAt                                                    <  2:1953460/128‑1 (MQ=255)

                                                                           ataataA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTAAATAATAAAAAAAATTTTTTTTCAAAA‑AATTATTAATGATTAAAtt                                                   >  1:1513316/1‑128 (MQ=255)

                                                                            taataa‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTGAATAATATAAAAAATTTTTTTTCAAAT‑AATTATTAATAAATAAAttt                                                  >  1:1139462/1‑128 (MQ=255)

                                                                             aataa‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑‑‑‑AAAAAAAAAA‑‑AAAT‑AAAA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCATCATTAAATTaaaaaa                                             >  1:237737/1‑128 (MQ=255)

                                                                              ataa‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCAAACAATAAAAAATTTTTTTTAAAAT‑AAGTATTAAGTATTAAATTTaa                                                >  1:1703767/1‑128 (MQ=255)

                                                                              aataaatttttAAAAAAAATAAATTTTG‑TTT‑TTTTTTTTTA‑TTTAATTT‑TT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTaa                                                <  1:1585676/119‑1 (MQ=255)

                                                                                      aTTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGAATAATATAAAAAATTTTTTTTAAAAT‑AATAATTAATTATTAAATTTAAAAAACaaa                                        >  1:1353779/1‑128 (MQ=255)

                                                                                       tttaaaaaaaTACTATGTT‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TTAA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCaa                                        <  1:97445/121‑1 (MQ=255)

                                                                                       ttAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAAAA‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑AA‑ATTTTAATAATATAAAAAATTTTTTTTAAAAT‑AATTAATAATTA‑TAAAATTAAAAAAACaa                                        >  2:1113457/1‑128 (MQ=255)

                                                                                        tAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAA‑AAAAAATTA‑TTTTGAATAAT‑TAAAAATTTTTTTTTTAAATAAATTATTATGTATTAAATTAAAAAAACaaa                                        >  2:171310/1‑128 (MQ=255)

                                                                                         aaccaaaataaatTTGG‑TTT‑TGTTTTTTTT‑TTTAATTT‑TT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAagat                                     <  2:1568888/123‑2 (MQ=255)

                                                                                         aaaCCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTTCATAAAATAAAAAATTTTTTTTCAAAA‑AATTAATAATAATTAAAATTAAAAAACCaaaat                                     >  1:1205563/1‑125 (MQ=255)

                                                                                           acaaaaTACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAttt                                   <  1:1794310/125‑1 (MQ=255)

                                                                                             caaattatttGTG‑TTT‑GGTTTTTTAA‑TTA‑AATA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                <  2:1039655/120‑1 (MQ=255)

                                                                                             cAATTAAATTTTG‑TTT‑GTTTTTTTTA‑TTT‑AATA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                <  2:1919870/128‑1 (MQ=255)

                                                                                             aaaaTATATTGTG‑TTT‑GGTTTTTTTA‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtat                                 <  1:1671987/127‑1 (MQ=255)

                                                                                              ataTACTTTTTG‑TTT‑GTTTTTTTTA‑TTTAATTT‑TT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                <  1:838545/126‑1 (MQ=255)

                                                                                              aaaTACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAAAA‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGAATAATATAAAAAATTTTTTTTCAAAT‑AATTATTAAGTATTAATTTTaaaaaaaaaatattta                                  >  2:1190771/1‑118 (MQ=255)

                                                                                              aaaTACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTGAATAATATAAAAAATTTTTTTTCAAAA‑AATAATTAAGTATTAATTTTAAAAAACAAAAATTtat                                 >  1:1834254/1‑128 (MQ=255)

                                                                                               attaaaTTGTG‑TTT‑GG‑TTTTTTA‑TTT‑AATA‑TT‑‑‑‑‑‑‑‑‑TAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCt                           <  1:642414/123‑1 (MQ=255)

                                                                                               aaaaaaTTTTG‑TTT‑TGTTTTTTTA‑TTT‑AATA‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                <  2:687598/123‑1 (MQ=255)

                                                                                               aaTACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATaaa                              <  1:575064/128‑1 (MQ=255)

                                                                                                aTACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGAATAATATAAAAAATTGTTTTTCAAAT‑AATTATTCATTATTAAATTTAAAAAACCAAAAGTTaaaa                               >  2:152926/1‑128 (MQ=255)

                                                                                                aTAAATTGTG‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATATGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAAt                             <  2:1387810/128‑1 (MQ=255)

                                                                                                  aaaTTGTT‑TTT‑GGTTTTTTTA‑TTT‑AATA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCt                           <  2:1431304/126‑1 (MQ=255)

                                                                                                   taTTTTG‑TTT‑GGTTTTTTTT‑TTT‑AATA‑TT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCtt                          <  1:388744/127‑1 (MQ=255)

                                                                                                    tttGTG‑TTT‑TGTTTTTTTA‑TTT‑ATTA‑TT‑‑‑T‑‑‑ATAAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCtt                          <  1:788063/127‑1 (MQ=255)

                                                                                                    aTTTTG‑TTTGGGTTTTTTTT‑TTT‑TATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCt                           <  1:1568455/128‑1 (MQ=255)

                                                                                                     ttGTG‑TTT‑GTTTTTTTTT‑TTT‑ATAATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAAGTGTATTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTg                         <  2:1814405/128‑1 (MQ=255)

                                                                                                     attttttttttttttttttA‑TTT‑AATA‑TTTTAA‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTTCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAAt                             <  1:290991/116‑1 (MQ=255)

                                                                                                      tgtg‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAAAA‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑AA‑ATTTGCATAAAAAAAAAAATTTTTTTTAAAAA‑AATTATTAAGGAGTAAATTTAAAAAACCAATATTTATTAAACtt                          >  1:1305492/1‑128 (MQ=255)

                                                                                                      tgtg‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑TTTTGCATACTATAAAAATTTGTTTTTCAAAT‑AAGTATTCAGGAGTAATTTTAAAAAACCAAGATTTTTAAATATTg                         >  2:1295703/1‑128 (MQ=255)

                                                                                                        tttttt‑GTTTTTTTTA‑TTT‑AATA‑TT‑‑‑G‑‑‑‑‑‑AAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGtttt                    <  2:766438/125‑1 (MQ=255)

                                                                                                        tttgtt‑GGTTTTTTTT‑TTT‑AAAT‑TT‑‑‑T‑‑‑A‑AAAAAAATAAATTAAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTgg                        <  1:618367/124‑1 (MQ=255)

                                                                                                        tg‑tTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAAAA‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTGAATAATAAAAAAAATTTTTTTTAAAAA‑AATTATAAATAATTAAATTAAAAAAAAAAAAATTTATAAAtaatgt                        >  2:899747/1‑123 (MQ=255)

                                                                                                        tg‑tTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTTTTTTTAAAAT‑AATTATAAATGAGTAAATTTAAAAAACAAAGAGTTATAAATATTTGtt                      >  2:1754057/1‑128 (MQ=255)

                                                                                                         g‑tTT‑GG‑TTTTTTA‑TTT‑ACTA‑TT‑‑‑GAAAA‑AAAAAAAAAAA‑‑AAAA‑AAAA‑‑‑TA‑ATTTGAATAAAATAAAAAATTTTTTTTCAAAT‑AAGAATTCAGGATTAAATTTAAAAAACAAAGAGTAATaaaaattgttt                      >  1:1871890/1‑120 (MQ=255)

                                                                                                          tttt‑GTTTTTTTTA‑TTT‑AATATTT‑‑‑T‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                     <  2:369130/127‑1 (MQ=255)

                                                                                                           ttt‑tGTTTTTTTA‑TTT‑AATT‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                     <  2:1066533/128‑1 (MQ=255)

                                                                                                            tt‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AAAT‑‑‑TA‑ATTTGCATAGTATAAAAATTTGTTTTTAAATA‑AATTATTAAGTAGTAAATTTAAAAAAACAAGAGTTATAAATATTGGtttt                    >  2:1266205/1‑128 (MQ=255)

                                                                                                            tt‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑AA‑ATTTTCATTATATAAAAAATTTTTTTTCAAAA‑AAGAATAAAGGAGTAAATTTAAAAAACAAATATTTATAAAACTTGAtattt                   >  2:1239939/1‑128 (MQ=255)

                                                                                                            tt‑GGTTTTTTTA‑TAT‑ACTA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAA‑AATA‑‑‑TA‑ATTTGCATACTAAAAAAAATTTTTTTTAAAAA‑AATTATTAAGAATTAAATTTAAAAAACAAATATTTAAAAAAATTGtttttt                   >  2:1971182/1‑128 (MQ=255)

                                                                                                             tttgTTTTTTTA‑TTT‑ATTT‑TTTA‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGtttt                    <  1:1449386/125‑1 (MQ=255)

                                                                                                               ggTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGAATACTATAAAAAATTTTTTTTCAAAT‑AATTATTCAGTATTAAATTTAAAAAACCAATATTTATAAATATTGTtttttttt                >  1:73823/1‑126 (MQ=255)

                                                                                                                ttttttttA‑TTT‑AATATTT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑AATTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGt                <  2:70173/127‑1 (MQ=255)

                                                                                                                 tttttttt‑ttA‑ATTT‑TT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGttt              <  1:427110/128‑1 (MQ=255)

                                                                                                                  ttttttA‑TAA‑AATT‑TT‑‑‑A‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTta             <  1:1079729/128‑1 (MQ=255)

                                                                                                                    ttttA‑TTT‑ACTA‑TT‑‑‑GAAAA‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGAATAATATAAAAAATTGTTTTTAAAAT‑AATTATAAATTATTAAATTTAAAAAAACAATATTTATAAATAtttttttttttttt              >  2:794913/1‑128 (MQ=255)

                                                                                                                    ttttA‑TTT‑ACAA‑TT‑‑‑GA‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTtat            <  2:937716/128‑1 (MQ=255)

                                                                                                                     ttta‑ttt‑aCTA‑TT‑‑‑GAA‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACAATAAAAAATTGTTTTACAAAA‑AATTATTAATAATTAAATTAAAAAAAACAAAATTTATAAATATTGGTTTTTTGTTtat            >  1:1607133/1‑128 (MQ=255)

                                                                                                                           tt‑aCTA‑TT‑‑‑G‑‑‑‑‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATAATATAAAAAATTTTTTTTAAAAT‑AATTATTAATGAGTAAATTTAAAAAACAAAATGTTTAAAATATTGGTTTTTTTTTTAtatttttat    >  2:605729/1‑128 (MQ=255)

CTTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAA‑AAGATTAAACCAAATACATTGTG‑TTT‑GGTTTTTTTA‑TTT‑ACTA‑TT‑‑‑G‑‑‑A‑AAAAAAAAAAA‑‑AAAT‑AATA‑‑‑TA‑ATTTGCATACTATAAAAAATTGTTTTTCAAAT‑AAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTT  >  CP016816/34818‑35067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.