| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 2945986 = | 84 (1.050) | 6 (0.080) | 6/266 | 9.7 | 6.2% | noncoding (91/97 nt) | RIP206 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP206 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913_3_pae_pgi | = 4080042 | 101 (1.330) | noncoding (23/98 nt) | REP297 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP297 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCAGAC > NC_000913_3_pae_pgi/2945842‑2946131 | tAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg > 2:1301863/1‑149 (MQ=255) gCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 1:102240/1‑149 (MQ=255) aCCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt < 2:1307458/149‑1 (MQ=255) aaTTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaacaac < 1:271740/149‑1 (MQ=255) ttAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCCGATGCGCTACGCTTATCAGCCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAcgc < 1:118444/149‑1 (MQ=255) aGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa < 2:281105/133‑1 (MQ=255) aGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa > 1:281105/1‑133 (MQ=255) gggCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTa < 2:825733/149‑1 (MQ=255) gggCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTa < 1:3203/149‑1 (MQ=255) gCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGCTTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCCCTTAGt > 2:864307/1‑149 (MQ=255) gCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGt < 2:1146440/149‑1 (MQ=255) gAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCa > 1:609870/1‑149 (MQ=255) ggTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCa‑at > 2:1195837/1‑149 (MQ=255) gTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGtaacat > 2:1057800/1‑144 (MQ=255) aTCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATc > 1:1392578/1‑149 (MQ=255) tCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCa < 1:173731/149‑1 (MQ=255) tCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGACGTGACCGTTATGAACAACGCGCACTTAGTCA‑ATAATCa < 1:698898/149‑1 (MQ=25) ccTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAgg < 2:1378319/149‑1 (MQ=255) aCCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCa‑ataat < 1:1395213/141‑1 (MQ=255) aCCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCa‑ataat > 2:1395213/1‑141 (MQ=255) ccTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGa < 2:102240/149‑1 (MQ=255) ccTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGa < 1:840686/149‑1 (MQ=255) cTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAg < 1:273827/149‑1 (MQ=255) tAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCTGCATGAACAACGCGCACCACGACC‑ACAATCAGTATGTGAgg < 2:526449/149‑1 (MQ=18) tAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAgg < 1:265446/149‑1 (MQ=255) gCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAgg < 2:863188/136‑1 (MQ=255) gCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAgg > 1:863188/1‑136 (MQ=255) gCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATACTATGGATTTGGATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGCGGTTAcc > 1:276337/1‑149 (MQ=255) gCATAAATGCCTGATGCGATACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCACGAACAACGCGCACTTAGTCA‑ATAATCAGGCTGTGGGGTTAcc > 1:973590/1‑149 (MQ=25) cATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTAccc < 1:15/149‑1 (MQ=255) tGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGAATGATTTGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGCTACCCCTCACCCTGt > 1:1169010/1‑149 (MQ=255) ggATGCGCTGCGCGTATCAGGGCTACATAACCCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGt < 2:111883/148‑1 (MQ=255) tGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCat > 2:416894/1‑149 (MQ=255) cTACTCTTACCAGGCTTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATcc < 2:273938/149‑1 (MQ=255) cTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATcc > 1:1331149/1‑149 (MQ=255) cTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATcc < 1:1092972/149‑1 (MQ=255) aTCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGACGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGCATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAAc > 2:1284893/1‑149 (MQ=255) aGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGc > 2:1219321/1‑149 (MQ=255) aGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGc < 2:545097/149‑1 (MQ=255) gCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCAt > 1:886476/1‑149 (MQ=255) cTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGAAGTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTTAGGTTACCCCTCACCCTGTCATATCCGTAAAAACggactac > 2:936598/1‑144 (MQ=38) tACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACAATGCAGTAGTCGGACAAACGGCATACa > 2:1404843/1‑149 (MQ=25) cATAACCCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGTATCCGGCATGAACATCGCGCACTTAGTCA‑ATAAGCAGTATGTGAGGTTACCCCTCACTCTGTCATATCCGTAAAAACGGCATACAGa < 2:310067/149‑1 (MQ=37) tAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAat < 1:1301863/149‑1 (MQ=255) agtCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAatat < 2:849866/147‑1 (MQ=255) tCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCCCCCTGGCATCTCCGTAAACACGGCATACGGAATAGca > 1:377088/1‑149 (MQ=37) gccTGCACTATTGTGGCTTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATca < 2:368911/148‑1 (MQ=255) cTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATcaca > 2:843997/1‑149 (MQ=255) tGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATCTCCGTAAAAACGGCATACAGAATATCACAt > 1:997136/1‑149 (MQ=255) atatTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGc > 1:823975/1‑149 (MQ=255) tatTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATTATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGcc < 1:905707/149‑1 (MQ=255) gATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAg < 1:679794/78‑1 (MQ=255) gATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAg > 2:679794/1‑78 (MQ=255) aTTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACTCTCTCTTATCCGTAAAAACGGCATACAGAATATAACATCACCCGCTAAAGa > 1:1101024/1‑149 (MQ=37) gCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGtt < 1:843997/149‑1 (MQ=255) tGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCCCATCAGCCGCCAAAGACGTTAcc > 2:92192/1‑149 (MQ=255) gATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCt > 1:959792/1‑149 (MQ=255) tttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCCGCCGCTAAAGACGTTACCTgc > 1:1262342/1‑149 (MQ=255) tGTAAGCCGGATAAGACGTTCACGCCGCATCCGGCATCAACAACGCGCACCAAAAGA‑AGAATTAGGAGGTACGGTTACCCCTCACCCTGTCATAACCGAAAAAACGGCATACACAATAGCACAACCGCCCGCAACGCCGTTACCtcccc > 2:239199/1‑145 (MQ=12) gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑CTAATCAGGATGTGCGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGcc > 1:607721/1‑149 (MQ=255) ctAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAAGTTACCCCTCACCGTGTGATATCCGTAAAAACAGCATACGGAATATCACCTCACCCGCTAGACACCTTACCTGCTcc > 2:1296466/2‑149 (MQ=25) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGccc > 2:1197943/1‑149 (MQ=255) aGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTc > 1:324584/1‑88 (MQ=255) aGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTc < 2:324584/88‑1 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCggg > 2:1022756/1‑149 (MQ=255) gATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGCAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCg‑g < 1:1142250/149‑1 (MQ=255) ggCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGA‑‑TGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAg > 1:220876/1‑149 (MQ=255) ggCGTTCACGCCGCATCAGGCATGTACAACGCTCACTCAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCAGCCTGTCATATCCGTAAAAACGGTATACAGAAGATCACATCAGCCGCTAAAGACGCTACCTGCGCCCGGGGCG‑GTTTTc < 1:1297347/149‑1 (MQ=255) gCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCa > 2:868637/1‑149 (MQ=255) gCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCAAACAGACAGTCACAACAGCCGCTAAAGACGCAACCCGCGCCCCGGGCGCGtttta > 2:1123686/1‑148 (MQ=37) gCGTTCACGACGCATCAGGCATGAACAACGCGCACGTAGTCA‑ATAATCACGATGTGAGGTTACCCCTCACCCTGTCAGCTCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCa < 2:51550/149‑1 (MQ=255) cagtccacaCCGCATCCTGCATGAACAATGCGCAC‑TAGGCACATAATCAGGATGTGAGGTGACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCa < 1:1244031/144‑1 (MQ=255) gTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAACGACACTACCGGCGCCCGGGGCG‑GTTGTcgga > 1:273757/1‑146 (MQ=39) ttCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCGTCACCCTGTACTATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAGGACGTTACCGGCGCCCGGGGCG‑GTTTTccaca > 1:694439/1‑145 (MQ=39) tCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCAc < 1:1057800/149‑1 (MQ=255) aCGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCAccc > 2:841572/1‑149 (MQ=255) cgccgcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTACAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCa < 2:662028/149‑1 (MQ=255) cgccgcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCa < 2:609870/149‑1 (MQ=255) cctcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCAGa < 1:593427/146‑1 (MQ=255) ccgcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGGCCGGGGCG‑GTTTTCAGCACCCAGa < 1:1219321/149‑1 (MQ=255) ccgcATCCGGCATCAACAAAGACCGTCTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCAGa < 2:997136/149‑1 (MQ=255) cgcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTCAAGACGTTACCTGCGCGCGGGGCG‑GTTTTCAGCACGCAGac > 1:20753/1‑149 (MQ=255) cgcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCAGac < 2:1247438/149‑1 (MQ=255) cgcATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCAGac > 2:1233800/1‑149 (MQ=255) | TAGCACCTCAGAATTAAAAAGGGCGAGGTTATCCCTCACCCTAAACGCATAAATGCCTGATGCGCTACGCTTATCAGGCCTACATAACTCCTGCAATATTTTGGATTTGCATGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACTTAGTCA‑ATAATCAGGATGTGAGGTTACCCCTCACCCTGTCATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCG‑GTTTTCAGCACCCAGAC > NC_000913_3_pae_pgi/2945842‑2946131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |