| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 4284603 = | NA (NA) | 6 (0.080) | 6/266 | 9.7 | 6.0% | noncoding (42/77 nt) | REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913_3_pae_pgi | 4284635 = | 94 (1.240) | noncoding (74/77 nt) | REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 102 total aligned reads displayed.
GGTAATGTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATCGCCCGCCGCAATT > NC_000913_3_pae_pgi/4284489‑4284781 | ggTAATGTAGGTATTGTTTTAATTCCCGCTCGCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTa < 2:1051055/149‑1 (MQ=255) gTAATGTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTCTCAGGCCTAc > 2:918595/1‑149 (MQ=255) aggTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaaa < 2:200162/147‑1 (MQ=255) gTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCT‑CAAAcac > 1:142682/1‑147 (MQ=255) gTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGAGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATCCGACGCTGTCCCCTCTTGTCAGACCTACCAAcc > 2:19407/1‑149 (MQ=37) gaGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCg < 2:973948/148‑1 (MQ=255) gATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTAc < 1:86922/149‑1 (MQ=255) gATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTAc > 1:750933/1‑149 (MQ=255) ttGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCg > 1:1279532/1‑149 (MQ=255) gTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGCTACCGAc < 1:405495/149‑1 (MQ=255) ttttAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACt > 2:1099962/1‑149 (MQ=255) tttAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTc > 2:394907/1‑149 (MQ=255) tttAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTc < 2:928737/149‑1 (MQ=255) tttAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTc > 1:928737/1‑149 (MQ=255) tttAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTc > 1:573224/1‑149 (MQ=255) ttAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGCATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAAGCCTACACACGGTTACCGAccac > 2:266937/1‑146 (MQ=37) aaTTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCa > 2:544236/1‑149 (MQ=255) cGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCAGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGc > 2:405243/1‑149 (MQ=255) ccTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATtg > 1:167361/1‑149 (MQ=255) ttATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCGGGATAAGGAGATCAAGGCGCAGGCGACGAGCAATACCTAATGCCACGCTGTCTCGTCTTATCCGGCCTACACACCGTTACCGACTCTCATCG‑GGCAATtgtg > 2:437114/1‑149 (MQ=255) ttATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATtgtg < 2:1211773/149‑1 (MQ=255) ttATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTAGCATCG‑GGCAATtgtg > 1:890440/1‑149 (MQ=255) tATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCGTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTgg < 1:590522/149‑1 (MQ=255) tATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTgg < 1:1099962/149‑1 (MQ=255) tATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTgg < 2:442627/149‑1 (MQ=255) aTGGGAGAAGGTTAACGGTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTggg < 2:1097930/149‑1 (MQ=255) tGGGAGAAGGTTAACGCTCGGGGAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGt < 2:237854/149‑1 (MQ=255) ggAGAAGGTTAACGCTCGGGTAACCCTTGGCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCATGATGTGACGCTGTCGCCTCTTAGCTGGCCTACAAACCGTTCCCGCCTCGCATAG‑GGCAAATGTGGGTTa > 1:269321/1‑149 (MQ=25) gagaAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTAc > 1:214954/1‑149 (MQ=255) gagaAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCACGACTTATCAGGCCTACAAACCGTTACCGACGCGCACCG‑GGCAATTGTGGGttcc > 2:269404/1‑147 (MQ=255) agaAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACg > 1:159348/1‑149 (MQ=255) agaAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACg > 2:951158/1‑149 (MQ=255) aaGGTTACCGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACTCAATGCCTGATGAGACGCTGTCGCGTCTTATCAGGCCCACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGAt < 2:1214956/149‑1 (MQ=255) aaGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAGTTGTGGGTTACGAt > 1:131656/1‑149 (MQ=255) aaGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGAt < 1:995258/149‑1 (MQ=255) aaGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGAt < 2:1077827/149‑1 (MQ=255) ggTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATgg < 1:584920/149‑1 (MQ=255) aaCGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATc > 1:519226/1‑149 (MQ=255) tCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGAt < 1:8091/149‑1 (MQ=255) ggTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGc < 2:573224/149‑1 (MQ=255) ggTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGc < 2:1279532/149‑1 (MQ=255) aCCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGc < 1:544236/149‑1 (MQ=255) ccTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGAGACGCTGTGGGGTCTTATCAGGCCTACAAACCGTTAACGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCtt > 1:1382112/1‑149 (MQ=255) cGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTCCAAACCGTTACCCAATC‑CAGCGCCGGTAGGGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTc < 1:692192/149‑1 (MQ=18) gAATGAAGGCCGGATAAGGCGTTTACGCCGAATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGCGGGTTACGATGGCATCG‑CGCTAGTCTGCTTCTCTTCa > 1:1366473/1‑149 (MQ=37) aTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAag < 1:1114872/149‑1 (MQ=255) tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAagcag < 1:187413/149‑1 (MQ=255) tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAagcag < 1:1163513/149‑1 (MQ=255) attgCCGGATGCGGCGTAAACGCCTTATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGAGAGCCTGCTTCTCTCCCagccg > 1:423921/4‑147 (MQ=25) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAAtt < 2:387235/104‑1 (MQ=255) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAAtt > 1:387235/1‑104 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCt > 1:737414/1‑149 (MQ=255) ccGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTtc < 2:717728/149‑1 (MQ=255) cGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCCTATTCTCAGGCCTACAAACCTTTATTGAATACTTTAA‑AGCACTTTCTTATCACTAGTGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTtct > 2:1005543/1‑149 (MQ=12) ggCGTTTACGCCGCCTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTAc < 1:394907/149‑1 (MQ=255) ggCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTAc > 2:422802/1‑149 (MQ=255) gCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACg > 1:317806/1‑149 (MQ=255) tACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAgg < 2:317806/149‑1 (MQ=255) aCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGa > 1:1239200/1‑149 (MQ=255) gccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCCGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTCTGGGTTACGGTGGCCTTG‑CCATAGCCGGCTTCTCTTCAAGCAGATTCTCGACTACGCCAGGATc > 1:826874/1‑149 (MQ=37) gccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATc < 2:890440/149‑1 (MQ=255) gccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTAACAGGCCTACAAACCGTTACCGGCTCGCATCG‑GGCAAGTGTGGGTTACGATGGCATCG‑CGATAGCCTGGTCCTCTTCAAGCAGGGGCACGACTACGCCGGGAtt > 1:997691/1‑148 (MQ=25) tcgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCg < 2:434590/148‑1 (MQ=255) ccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGAc < 2:355740/136‑1 (MQ=255) ccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGAc > 1:355740/1‑136 (MQ=255) aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCTTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCaa < 1:580454/149‑1 (MQ=255) aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCaa > 2:72304/1‑149 (MQ=255) tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAagcagc > 1:415496/1‑123 (MQ=255) tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAagcagc < 2:415496/123‑1 (MQ=255) tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGACTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAg > 2:1070227/1‑149 (MQ=255) cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGCTGGCAGCGTTCATTG‑CTTCTTTTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCg > 1:41459/1‑149 (MQ=25) cGGCAATCAATGCCTGATGCGACGCTGTCAAGGCTTAGCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCCTCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCGCGAATTCGCCAGGATCGGCGAGCg > 2:1013600/1‑149 (MQ=38) ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCT‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGAAGCTTCTCGACTACGCCAGGATCGGCCAGCGt > 1:43203/1‑149 (MQ=255) ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGt > 2:1315183/1‑149 (MQ=255) aatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGa > 2:762800/1‑149 (MQ=255) aatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGa > 1:1304105/1‑149 (MQ=255) atcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAg < 1:1171694/149‑1 (MQ=255) aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGt > 1:743843/1‑148 (MQ=255) aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGt < 2:743843/148‑1 (MQ=255) tGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATc > 1:721466/1‑149 (MQ=255) tGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCTGCAAGCGTCGAGGTATCGccc < 2:1239200/149‑1 (MQ=255) tGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAgg < 2:167361/149‑1 (MQ=255) gACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTg > 1:1010976/1‑149 (MQ=255) cGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCt < 1:422802/149‑1 (MQ=255) gCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTg < 2:823308/149‑1 (MQ=255) gCTGTCGCGCCTGTTCAGGCCTATAAACGGTTATCGACCTGCATCG‑GGTAATTGGGGGTTACGATGTCAGCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCATGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTg < 2:447013/149‑1 (MQ=255) tGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCaa > 1:487698/1‑91 (MQ=255) tGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCaa < 2:487698/91‑1 (MQ=255) tCGCGTCTTATCAGGCCTACAAACCGTTAGCGACTCGCATCG‑GGCAATTGTGGGTTACGATAGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTCGTAt > 1:1188584/1‑149 (MQ=255) tCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTAt > 1:663656/1‑149 (MQ=255) cgcgTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATc < 1:951158/149‑1 (MQ=255) cTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATcgcccg > 1:170762/1‑149 (MQ=255) taacAGGTCTACAAACTGTTACCGACCCGCATCG‑GGAAATCGGGCGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAATCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATTCTCCAGGTTGCCGGTAGcgcccgcc < 2:497493/146‑1 (MQ=255) tCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATCGCCcgccgc > 1:1233174/1‑149 (MQ=255) aGGCCTTCAAACCGTTACCGGCTCGCATCG‑GTCAATTGGGGGTTACGGTGGCAGCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATCGCCCGCCGCaa < 2:218508/149‑1 (MQ=255) aGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTATGCCCGCTTGTGCAGGCGTCGAGGTATCGGCCAGGTTGCGGGTATCGCCCGCCGCaa > 1:1030265/1‑149 (MQ=255) aGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGTGCGTCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATCGCCCGCCGCaa > 1:1030266/1‑149 (MQ=255) ggCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGAt > 1:503726/1‑48 (MQ=255) ggCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGAt < 2:503726/48‑1 (MQ=255) gCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGGTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATCGCCCGCCGCAAtt < 1:751398/149‑1 (MQ=255) | GGTAATGTAGGGATTGTTTTAATTCCCGCTCCCTTATGGGAGAAGGTTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCG‑GGCAATTGTGGGTTACGATGGCATCG‑CGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGCGTCGAGGTATCGCCCAGGTTGCTGGTATCGCCCGCCGCAATT > NC_000913_3_pae_pgi/4284489‑4284781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |