New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 2700550 =115 (1.230)14 (0.180) 14/224 7.6 12.4% noncoding (31/77 nt) ohsC sRNA antisense regulator of shoB toxin
?NC_000913_3_hsa_tpiA 2700601 = 100 (1.250)intergenic (+5/+17) ohsC/acpS sRNA antisense regulator of shoB toxin/holo‑[acyl‑carrier‑protein] synthase 1
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

AATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCT  >  NC_000913_3_hsa_tpiA/2700401‑2700697
                                                                                                                                                     |                                                                                                                                                    
aaTTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGGATGCTGCACAAAATTAAAGt                                                                                                                                                      >  2:71623/1‑150 (MQ=255)
      cGGTCACGTTAGTCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTaaaaa                                                                                                                                                <  1:1242759/150‑1 (MQ=255)
      cGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTaaaaa                                                                                                                                                <  1:1242662/150‑1 (MQ=255)
       ggTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAg                                                                                                                                               >  4:1978/1‑150 (MQ=255)
             gTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAc                                                                                                                                         >  3:69219/1‑150 (MQ=255)
             gTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAc                                                                                                                                         >  1:447339/1‑150 (MQ=255)
             gTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAc                                                                                                                                         >  1:447021/1‑150 (MQ=255)
              ttAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAcc                                                                                                                                        >  1:25566/1‑150 (MQ=255)
               tAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccc                                                                                                                                       <  3:173959/150‑1 (MQ=255)
                 aTCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccccc                                                                                                                                     >  4:375579/1‑150 (MQ=255)
                   cTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGt                                                                                                                                   <  1:1092994/150‑1 (MQ=255)
                   cTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGt                                                                                                                                   <  1:684434/150‑1 (MQ=255)
                     ttCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTc                                                                                                                                 >  2:652165/1‑150 (MQ=255)
                        cATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCtt                                                                                                                              >  2:273272/1‑150 (MQ=255)
                         aTCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTc                                                                                                                                 <  1:166466/146‑1 (MQ=255)
                         aTCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTc                                                                                                                                 >  2:166466/1‑146 (MQ=255)
                         aTCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTa                                                                                                                             >  4:279263/1‑150 (MQ=255)
                         aTCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTa                                                                                                                             >  3:837451/1‑150 (MQ=255)
                          tCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTAGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTCCATGCTGCACAAAATTAAAGTTAAAAAGCAAAACCCCCGTTCCTTAc                                                                                                                            <  2:840654/150‑1 (MQ=255)
                              tatTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGt                                                                                                                        >  2:300052/1‑150 (MQ=255)
                                  gCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCATGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCATAAAAAAAAAGAAAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgg                                                                                                                    <  4:572156/150‑1 (MQ=255)
                                    tttCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAATTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                                                                  <  1:953869/150‑1 (MQ=255)
                                    tttCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                                                                  <  1:953734/150‑1 (MQ=255)
                                     ttcttcGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCggggg                                                                                                                 >  4:785435/1‑150 (MQ=255)
                                        ttggTACAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATGGGTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGttt                                                                                                              <  2:1033985/147‑1 (MQ=255)
                                        ttcGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGttt                                                                                                              <  2:1033572/150‑1 (MQ=255)
                                          cGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTa                                                                                                            <  2:823268/150‑1 (MQ=255)
                                           gTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTAc                                                                                                           <  1:652165/150‑1 (MQ=255)
                                            tAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACt                                                                                                          <  1:943163/150‑1 (MQ=255)
                                              gaGGCTGGGGTTTTTGTGCTGACGATTGCAACTTGGGTGTAAAAGATAAGTACACTGATCCACAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAACCCCCCGTTCCTTACCAGTTCGGGGGTTTTACttt                                                                                                        <  4:73667/149‑1 (MQ=255)
                                                 gCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccc                                                                                                                                       <  1:14683/116‑1 (MQ=255)
                                                 gCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccc                                                                                                                                       >  2:14683/1‑116 (MQ=255)
                                                 gCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTa                                                                                                     <  2:246776/150‑1 (MQ=255)
                                                   tCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaaa                                                                                                   <  3:349002/150‑1 (MQ=255)
                                                   tCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaaa                                                                                                   <  3:557012/150‑1 (MQ=255)
                                                     gAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAaga                                                                                                 >  2:1248249/1‑150 (MQ=255)
                                                              tGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGtat                                                                                       >  4:594388/1‑150 (MQ=255)
                                                                 tAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑CCGGtattat                                                                                    >  2:756724/1‑150 (MQ=255)
                                                                  aaaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTattatt                                                                                   >  4:675407/1‑150 (MQ=255)
                                                                    aGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGta                                                                                        >  1:793302/1‑143 (MQ=255)
                                                                    aGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGta                                                                                        <  2:793302/143‑1 (MQ=255)
                                                                          cAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACtttt                                                                                                       >  2:696915/1‑123 (MQ=255)
                                                                          cAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACtttt                                                                                                       <  1:696915/123‑1 (MQ=255)
                                                                           aaGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTATAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACttt                                                                          <  2:1009249/150‑1 (MQ=255)
                                                                           aaGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACttt                                                                          >  2:819070/1‑150 (MQ=255)
                                                                           aaGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACttt                                                                          >  1:835336/1‑150 (MQ=255)
                                                                            agttttttGGAAAAGATAAGTATTCGGATCCATAATCGCTGTTGTTGAGGGTGCATGTTGCACAAAATTAAAGTTATAAAGTAAATCCCGCGTTCCTTACCGTTTCTGGGTTTTTTCTTTTTAAAGATA‑ACTGTATTATTTTTAACTTTc                                                                         <  2:541601/144‑1 (MQ=255)
                                                                             gTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCa                                                                        <  3:785435/150‑1 (MQ=255)
                                                                                gCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCaata                                                                     >  4:255234/1‑150 (MQ=255)
                                                                                   tGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAAtt                                                                  >  4:267582/1‑150 (MQ=255)
                                                                                     tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACtt                                                                                                         >  2:504729/1‑110 (MQ=255)
                                                                                     tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACtt                                                                                                         <  1:504729/110‑1 (MQ=255)
                                                                                     tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTAc                                                                >  1:1288261/1‑150 (MQ=255)
                                                                                     tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTAc                                                                >  2:513566/1‑150 (MQ=255)
                                                                                      aaaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTAcc                                                               >  4:480958/1‑150 (MQ=255)
                                                                                       aaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCg                                                              <  3:480958/150‑1 (MQ=255)
                                                                                        aaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGt                                                             >  3:106617/1‑150 (MQ=255)
                                                                                          gATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGACACTGTGTT‑TGGTTATCTTTCAATAATTACCGTgg                                                           <  4:837451/150‑1 (MQ=255)
                                                                                          gATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTgg                                                           <  1:273272/150‑1 (MQ=255)
                                                                                           aTAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGc                                                          <  3:279263/150‑1 (MQ=255)
                                                                                               gTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCg                                                              >  4:723317/1‑142 (MQ=255)
                                                                                                tACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAg                                                     >  1:64795/1‑150 (MQ=255)
                                                                                                     tGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAg                                                >  1:433566/1‑150 (MQ=255)
                                                                                                       aTCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTg                                              >  2:934514/1‑150 (MQ=255)
                                                                                                       aTCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTg                                              >  1:93787/1‑150 (MQ=255)
                                                                                                         ccATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGcc                                            >  3:57864/1‑150 (MQ=255)
                                                                                                          cATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCg                                           <  1:1105265/150‑1 (MQ=255)
                                                                                                           aTAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGc                                          <  3:267582/150‑1 (MQ=255)
                                                                                                             aaTCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTc                                        >  2:255132/1‑150 (MQ=255)
                                                                                                                 gCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑Ac                                                                                            <  4:125264/94‑1 (MQ=255)
                                                                                                                 gCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑Ac                                                                                            >  3:125264/1‑94 (MQ=255)
                                                                                                                   tgttgtTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTaa                                                                                                                                            <  4:567506/45‑1 (MQ=255)
                                                                                                                   tgttgtTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTaa                                                                                                                                            >  3:567506/1‑45 (MQ=255)
                                                                                                                   tgttgtTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAAtt                                                                  <  1:30746/118‑1 (MQ=255)
                                                                                                                   tgttgtTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAAtt                                                                  >  2:30746/1‑118 (MQ=255)
                                                                                                                     ttgttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCa                                <  1:3740/150‑1 (MQ=255)
                                                                                                                     ttgttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTAAGCTGCCa                                <  4:69219/150‑1 (MQ=255)
                                                                                                                       gttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGc                              <  4:606324/150‑1 (MQ=255)
                                                                                                                          gAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGtt                           <  3:675407/150‑1 (MQ=255)
                                                                                                                           aGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAATCCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTa                          <  2:447339/150‑1 (MQ=255)
                                                                                                                           aGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTa                          <  2:447021/150‑1 (MQ=255)
                                                                                                                             ggTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACa                        <  2:1288261/150‑1 (MQ=255)
                                                                                                                              gTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACAt                       <  3:375579/150‑1 (MQ=255)
                                                                                                                              gTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACAt                       <  1:71623/150‑1 (MQ=255)
                                                                                                                               tGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCt                                    >  2:1352265/1‑136 (MQ=255)
                                                                                                                               tGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCt                                    <  1:1352265/136‑1 (MQ=255)
                                                                                                                                gCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTTGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGc                     <  4:607781/150‑1 (MQ=255)
                                                                                                                                gCATGCTGCACAAAATTAAAGATAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTCTCAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATga                     >  2:517427/1‑149 (MQ=255)
                                                                                                                                  aTGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCat                   >  2:440372/1‑150 (MQ=255)
                                                                                                                                    gctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTAtttt                                                                                 >  3:308827/1‑86 (MQ=255)
                                                                                                                                    gctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGc                                                    >  2:1207712/1‑115 (MQ=255)
                                                                                                                                    gctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGc                                                    <  1:1207712/115‑1 (MQ=255)
                                                                                                                                    gctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCatat                 >  1:181369/1‑150 (MQ=255)
                                                                                                                                     ctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATAtt                <  2:181369/150‑1 (MQ=255)
                                                                                                                                           aaaaTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAAc          >  3:497909/1‑150 (MQ=255)
                                                                                                                                            aaaTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACg         <  3:594388/150‑1 (MQ=255)
                                                                                                                                                tAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                                                                  >  2:1257198/1‑42 (MQ=255)
                                                                                                                                                tAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                                                                  <  1:1257198/42‑1 (MQ=255)
                                                                                                                                                 aaaGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACa                        >  2:556726/1‑130 (MQ=255)
                                                                                                                                                   aGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCt  <  1:255132/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGA‑ACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCT  >  NC_000913_3_hsa_tpiA/2700401‑2700697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.