New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	3915505 =	75 (1.020)	11 (0.160)	11/232	6.2	13.8%	intergenic (‑305/+48)	glmU/atpC	fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
	?	NC_000913_3_pae_tpiA	3915535 =	68 (1.000)					intergenic (‑335/+18)	glmU/atpC	fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGC  >  NC_000913_3_pae_tpiA/3915358‑3915650                                                                                                                                                     |                                                                                                                                                  tGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaaaaa                                                                                                                                                 >  2:845759/1‑150 (MQ=255)  gCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaaaaaa                                                                                                                                                <  1:845759/150‑1 (MQ=255)   cAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAag                                                                                                                                               >  4:354802/1‑150 (MQ=255)   cAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTGTATATCAGCAGGACCTATGTGAACGCTATCCAGGCCGGGGCACACGCGC‑AAAACAAag                                                                                                                                               >  1:331230/1‑150 (MQ=255)    aGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagc                                                                                                                                              >  2:48998/1‑150 (MQ=255)        aaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagccagc                                                                                                                                          <  3:212717/150‑1 (MQ=255)             aGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGtt                                                                                                                                     <  1:202899/150‑1 (MQ=255)                        tAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGc                                                                                                                          >  1:897125/1‑150 (MQ=255)                            ttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCtttt                                                                                                                      <  1:766805/150‑1 (MQ=255)                             tAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCtttt                                                                                                                      >  2:737552/1‑149 (MQ=255)                             tAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCtttt                                                                                                                      <  1:737552/149‑1 (MQ=255)                               aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTtgtg                                                                                                                   >  1:582970/1‑150 (MQ=255)                                  gTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCtt                                                                                                                >  1:670398/1‑150 (MQ=255)                                  gTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCtt                                                                                                                >  1:670381/1‑150 (MQ=255)                                       gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCaa                                                                                                           >  3:229303/1‑150 (MQ=255)                                           aTGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCg                                                                                                       <  1:48998/150‑1 (MQ=255)                                                tttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑‑AAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTa                                                                                                 <  3:335579/150‑1 (MQ=255)                                                 ttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTa                                                                                                 <  3:64243/150‑1 (MQ=255)                                                     tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATc                                                                                             >  2:115256/1‑150 (MQ=255)                                                      ctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCg                                                                                            >  1:757534/1‑150 (MQ=255)                                                       ttATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGc                                                                                           <  3:354802/150‑1 (MQ=255)                                                              gATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                    <  4:183076/150‑1 (MQ=255)                                                              gATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                    >  3:183076/1‑150 (MQ=255)                                                                   aTGAATAAACAGGAAAACAGGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCaa                                                                               >  1:569976/1‑150 (MQ=255)                                                                       aTAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                              <  1:248533/131‑1 (MQ=255)                                                                       aTAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                              >  2:248533/1‑131 (MQ=255)                                                                       aTAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCg                                                                           <  2:897125/150‑1 (MQ=255)                                                                               gAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                    <  2:386489/133‑1 (MQ=255)                                                                               gAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                    >  1:386489/1‑133 (MQ=255)                                                                                aaaaCAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACgcgc                                                                  >  1:65181/1‑150 (MQ=255)                                                                                     aGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTAATCAGTTCGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTg                                                             >  1:443264/1‑150 (MQ=255)                                                                                        ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                              <  1:548406/114‑1 (MQ=255)                                                                                        ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                              >  2:548406/1‑114 (MQ=255)                                                                                          ggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGa                                                                                                                               <  1:743655/79‑1 (MQ=255)                                                                                          ggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGa                                                                                                                               >  2:743655/1‑79 (MQ=255)                                                                                          ggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGa                                                        <  2:757534/150‑1 (MQ=255)                                                                                              ttATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGcgcgttatc                                                    <  2:443264/150‑6 (MQ=255)                                                                                                 tatCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 <  3:130155/150‑1 (MQ=255)                                                                                                    cagcagGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc                                              <  1:268248/150‑1 (MQ=255)                                                                                                           aTCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTCTTCAAGCCAGTGTTACATCGCTTTTTTGGTAAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTcc                                       >  2:177685/1‑150 (MQ=255)                                                                                                            tCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCg                                      >  3:524498/1‑150 (MQ=255)                                                                                                             cTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGc                                     <  2:569976/150‑1 (MQ=255)                                                                                                              tATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGa                                                                          >  1:811776/1‑112 (MQ=255)                                                                                                              tATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGa                                                                          <  2:811776/112‑1 (MQ=255)                                                                                                                         tATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt                                                                                                               <  2:100913/64‑1 (MQ=255)                                                                                                                         tATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt                                                                                                               >  1:100913/1‑64 (MQ=255)                                                                                                                         tATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGc                         <  1:262634/150‑1 (MQ=255)                                                                                                                          aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 <  4:163227/125‑1 (MQ=255)                                                                                                                          aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 >  3:163227/1‑125 (MQ=255)                                                                                                                          aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 >  3:162918/1‑125 (MQ=255)                                                                                                                          aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 <  4:162918/125‑1 (MQ=255)                                                                                                                              aGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAAt                    >  2:11643/1‑150 (MQ=255)                                                                                                                               ggACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt                                                                                                  <  2:344356/71‑1 (MQ=255)                                                                                                                               ggACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt                                                                                                  >  1:344356/1‑71 (MQ=255)                                                                                                                                gACGGGTCACACGCGCAAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATc                   <  1:31942/150‑1 (MQ=255)                                                                                                                                gACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCt                  >  4:40766/1‑150 (MQ=255)                                                                                                                                   gggTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                       >  2:270554/1‑110 (MQ=255)                                                                                                                                   gggTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                       <  1:270554/110‑1 (MQ=255)                                                                                                                                     gTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTc             >  1:541117/1‑150 (MQ=255)                                                                                                                                      tCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCg            >  4:158405/1‑150 (MQ=255)                                                                                                                                          acGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa                     <  4:76788/137‑1 (MQ=255)                                                                                                                                          acGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa                     >  3:76788/1‑137 (MQ=255)                                                                                                                                            gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc                                                                                                             <  1:236920/47‑1 (MQ=255)                                                                                                                                            gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc                                                                                                             >  2:236920/1‑47 (MQ=255)                                                                                                                                            gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTga      >  2:907974/1‑150 (MQ=255)                                                                                                                                            gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTga      <  2:65181/150‑1 (MQ=255)                                                                                                                                              gc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGa                                                        >  2:69998/1‑98 (MQ=255)                                                                                                                                              gc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGa                                                        <  1:69998/98‑1 (MQ=255)                                                                                                                                                 aaaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                       >  2:846530/1‑97 (MQ=255)                                                                                                                                                 aaaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                       <  1:846530/97‑1 (MQ=255)                                                                                                                                                 aaaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGACCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAgc  >  4:48320/1‑150 (MQ=255)                                                                                                                                                   aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 <  3:359580/101‑1 (MQ=255)                                                                                                                                                   aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                 >  4:359580/1‑101 (MQ=255)                                                                                                                                                   aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc                                              <  3:353670/104‑1 (MQ=255)                                                                                                                                                   aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc                                              >  4:353670/1‑104 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGC  >  NC_000913_3_pae_tpiA/3915358‑3915650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.