New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 3915505 =75 (1.020)11 (0.160) 11/232 6.2 13.8% intergenic (‑305/+48) glmU/atpC fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
?NC_000913_3_pae_tpiA 3915535 = 68 (1.000)intergenic (‑335/+18) glmU/atpC fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCT  >  NC_000913_3_pae_tpiA/3915388‑3915682
                                                                                                                                                    |                                                                                                                                                   
aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTtgtg                                                                                                                                                   >  1:582970/1‑150 (MQ=255)
   gTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCtt                                                                                                                                                >  1:670398/1‑150 (MQ=255)
   gTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCtt                                                                                                                                                >  1:670381/1‑150 (MQ=255)
        gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCaa                                                                                                                                           >  3:229303/1‑150 (MQ=255)
            aTGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCg                                                                                                                                       <  1:48998/150‑1 (MQ=255)
                 tttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑‑AAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTa                                                                                                                                 <  3:335579/150‑1 (MQ=255)
                  ttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTa                                                                                                                                 <  3:64243/150‑1 (MQ=255)
                      tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATc                                                                                                                             >  2:115256/1‑150 (MQ=255)
                       ctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCg                                                                                                                            >  1:757534/1‑150 (MQ=255)
                        ttATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGc                                                                                                                           <  3:354802/150‑1 (MQ=255)
                               gATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                                                    <  4:183076/150‑1 (MQ=255)
                               gATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                                                    >  3:183076/1‑150 (MQ=255)
                                    aTGAATAAACAGGAAAACAGGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCaa                                                                                                               >  1:569976/1‑150 (MQ=255)
                                        aTAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                                                              <  1:248533/131‑1 (MQ=255)
                                        aTAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                                                              >  2:248533/1‑131 (MQ=255)
                                        aTAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCg                                                                                                           <  2:897125/150‑1 (MQ=255)
                                                gAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                                                    >  1:386489/1‑133 (MQ=255)
                                                gAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg                                                                                                                    <  2:386489/133‑1 (MQ=255)
                                                 aaaaCAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACgcgc                                                                                                  >  1:65181/1‑150 (MQ=255)
                                                      aGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTAATCAGTTCGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTg                                                                                             >  1:443264/1‑150 (MQ=255)
                                                         ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                                                              <  1:548406/114‑1 (MQ=255)
                                                         ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt                                                                                                                              >  2:548406/1‑114 (MQ=255)
                                                           ggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGa                                                                                        <  2:757534/150‑1 (MQ=255)
                                                               ttATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGcgcgttatc                                                                                    <  2:443264/150‑6 (MQ=255)
                                                                  tatCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 <  3:130155/150‑1 (MQ=255)
                                                                     cagcagGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc                                                                              <  1:268248/150‑1 (MQ=255)
                                                                            aTCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTCTTCAAGCCAGTGTTACATCGCTTTTTTGGTAAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTcc                                                                       >  2:177685/1‑150 (MQ=255)
                                                                             tCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCg                                                                      >  3:524498/1‑150 (MQ=255)
                                                                              cTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGc                                                                     <  2:569976/150‑1 (MQ=255)
                                                                               tATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGa                                                                                                          <  2:811776/112‑1 (MQ=255)
                                                                               tATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGa                                                                                                          >  1:811776/1‑112 (MQ=255)
                                                                                          tATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt                                                                                                                                               <  2:100913/64‑1 (MQ=255)
                                                                                          tATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt                                                                                                                                               >  1:100913/1‑64 (MQ=255)
                                                                                          tATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGc                                                         <  1:262634/150‑1 (MQ=255)
                                                                                           aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 <  4:162918/125‑1 (MQ=255)
                                                                                           aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 <  4:163227/125‑1 (MQ=255)
                                                                                           aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 >  3:163227/1‑125 (MQ=255)
                                                                                           aTTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 >  3:162918/1‑125 (MQ=255)
                                                                                               aGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAAt                                                    >  2:11643/1‑150 (MQ=255)
                                                                                                ggACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt                                                                                                                                  <  2:344356/71‑1 (MQ=255)
                                                                                                ggACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt                                                                                                                                  >  1:344356/1‑71 (MQ=255)
                                                                                                 gACGGGTCACACGCGCAAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATc                                                   <  1:31942/150‑1 (MQ=255)
                                                                                                 gACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCt                                                  >  4:40766/1‑150 (MQ=255)
                                                                                                    gggTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                                                       >  2:270554/1‑110 (MQ=255)
                                                                                                    gggTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                                                       <  1:270554/110‑1 (MQ=255)
                                                                                                      gTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTc                                             >  1:541117/1‑150 (MQ=255)
                                                                                                       tCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCg                                            >  4:158405/1‑150 (MQ=255)
                                                                                                           acGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa                                                     >  3:76788/1‑137 (MQ=255)
                                                                                                           acGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa                                                     <  4:76788/137‑1 (MQ=255)
                                                                                                             gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc                                                                                                                                             >  2:236920/1‑47 (MQ=255)
                                                                                                             gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc                                                                                                                                             <  1:236920/47‑1 (MQ=255)
                                                                                                             gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTga                                      >  2:907974/1‑150 (MQ=255)
                                                                                                             gcgc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTga                                      <  2:65181/150‑1 (MQ=255)
                                                                                                               gc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGa                                                                                        >  2:69998/1‑98 (MQ=255)
                                                                                                               gc‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGa                                                                                        <  1:69998/98‑1 (MQ=255)
                                                                                                                  aaaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                                                       >  2:846530/1‑97 (MQ=255)
                                                                                                                  aaaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt                                                                                       <  1:846530/97‑1 (MQ=255)
                                                                                                                  aaaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGACCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAgc                                  >  4:48320/1‑150 (MQ=255)
                                                                                                                    aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 <  3:359580/101‑1 (MQ=255)
                                                                                                                    aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt                                                                                 >  4:359580/1‑101 (MQ=255)
                                                                                                                    aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc                                                                              <  3:353670/104‑1 (MQ=255)
                                                                                                                    aaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc                                                                              >  4:353670/1‑104 (MQ=255)
                                                                                                                         agccagccTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAAt                           <  4:524498/150‑1 (MQ=255)
                                                                                                                            cagccTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCCACGTCGCCGTGAGAGCTGCTAAtgtg                        <  1:11643/150‑1 (MQ=255)
                                                                                                                                     tCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGc               <  1:807914/150‑1 (MQ=255)
                                                                                                                                     tCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGc               <  3:40766/150‑1 (MQ=255)
                                                                                                                                      ccAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGcc              >  1:687113/1‑150 (MQ=255)
                                                                                                                                      ccAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGcc              <  1:9618/150‑1 (MQ=255)
                                                                                                                                            tGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGt        <  2:864656/150‑1 (MQ=255)
                                                                                                                                              gCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAAtgtg                        <  1:883127/132‑1 (MQ=255)
                                                                                                                                              gCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAAtgtg                        >  2:883127/1‑132 (MQ=255)
                                                                                                                                              gCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGttt      <  1:907974/150‑1 (MQ=255)
                                                                                                                                                ttttGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTCCg    >  4:163549/1‑150 (MQ=255)
                                                                                                                                                  ttGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCt  >  1:123919/1‑150 (MQ=255)
                                                                                                                                                  ttGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCt  <  4:456039/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTCTTCAGCCTTACGTTTCGCT  >  NC_000913_3_pae_tpiA/3915388‑3915682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.