New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =2749 (0.900)348 (0.130) 136/226 13.3 12.8% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 2257 (0.820)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2885 total aligned reads displayed.

AAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76765‑77019
                                                                                                                                |                                                                                                                                 
aaaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTATTTAAAGAAAAATATTACAAc                                                                                                                                   >  1:4179736/1‑128 (MQ=255)
    ttATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTAAAATAAAATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑ttta                                                                                                                             >  2:6294060/1‑127 (MQ=255)
       tatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑ttttttt                                                                                                                          >  2:1167085/1‑128 (MQ=255)
         tatatTTTTGAAATTAATGATTTATAATAAAAATAAATAAAAAATTTAAAAACCAAATTACCCATTAAATTAAAATAACATTATATAAAGATA‑AATTTTTTAAATAAAAATATTACAAA‑‑ttttttttt                                                                                                                        <  1:6428665/128‑1 (MQ=255)
         tatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑ttttttttt                                                                                                                        >  1:2170607/1‑128 (MQ=255)
           tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑tttttttattt                                                                                                                      >  2:4483525/1‑128 (MQ=255)
           tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑ttatattttat                                                                                                                      >  1:3497622/1‑126 (MQ=255)
            atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑tttttttttttt                                                                                                                     >  1:888731/1‑128 (MQ=255)
                  gAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAAAACAAATTACACTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAATAAAAATATTACAAA‑‑tttttttttttttttttt                                                                                                               >  1:2041757/1‑126 (MQ=255)
                   aaCTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑tttttttttttttttggac                                                                                                              >  2:3707134/1‑124 (MQ=255)
                    aCTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑tttttttttttttttggaaa                                                                                                             >  2:4237805/1‑123 (MQ=255)
                        aaGTATTTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAATATA‑AATTTTTTAAACAAAAAAATTAAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAc                                                                                                        <  2:6388690/128‑1 (MQ=255)
                        aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAc                                                                                                        >  1:5338323/1‑128 (MQ=255)
                         aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTATTTTTTTTTTTGTAAATAAc                                                                                                        >  2:2688794/1‑128 (MQ=255)
                                ataataAAAATTAATAATAACTGTACAAACCAAATTCACCTTTAAATTCAAATAACATTATATAAATATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAtt                                                                                                <  2:834371/128‑1 (MQ=255)
                                    taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGTAAATAACA‑A‑AATTTTAcc                                                                                           >  2:5294845/1‑128 (MQ=255)
                                    taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTATTTTTTTTTTTTT‑‑AACTAACATAATATTTTAcc                                                                                           >  2:4743480/1‑128 (MQ=255)
                                      cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTTTAAATAACATAAAATTTTAcc                                                                                           >  2:6507684/1‑128 (MQ=255)
                                        aaTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTATAACAAACAAATAATTTTACAAat                                                                                        >  2:3558853/1‑128 (MQ=255)
                                         aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAATAAAAATATTACAAC‑‑TATTTTTTTTTTTTTT‑TAAATAACATATAAtttaaaaaatt                                                                                       >  1:4837129/1‑120 (MQ=255)
                                          ttAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTTGAAAAAAAATATAATTTTAAAAatt                                                                                       >  1:1319766/1‑128 (MQ=255)
                                          ttAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGTAAATAAAATATAATTTTAAAAattat                                                                                     >  2:4911035/1‑128 (MQ=255)
                                             ataataaCTGTAGATCCCAAAATACCCTTTAAATTCTAATAATAATATATAAATATT‑AATTTTTTAAATAAAAATATAACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAattatt                                                                                    <  1:2988390/128‑1 (MQ=255)
                                               aaaaaatGTAAAAACCAAATTTCCCTTTAAATTTAAATAAAATTATATAAATATA‑AATTTTTTAAATAAAAATATTA‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                 <  2:616658/122‑1 (MQ=255)
                                                 taaCTTTACAAACCAAATTCCCCTTTAAATTCAAATAACATTATATAAATATA‑AATTTTTTAAATAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatt                                                                              <  1:3611796/128‑1 (MQ=255)
                                                 taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTT‑AAAAAAACATATAATATTAAAAATTAATATaat                                                                               >  2:3839988/1‑128 (MQ=255)
                                                  aaatGTACAACCCAAATTCCACTTTAAATTAAAATAACATTATATAAATAAA‑AATTTTTTAAATAAAAATATTAAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatt                                                                              <  2:1767353/125‑1 (MQ=255)
                                                  aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAACT‑TTTTTTTTTTTTTTTTTGAAATAAAATATAATTTTAAAAATTATTAGat                                                                                >  2:4131235/1‑127 (MQ=255)
                                                  aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGTAAATAAAATATAATTTTAAAAATTATAATaattt                                                                             >  1:309788/1‑128 (MQ=255)
                                                    cTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttca                                                                           >  1:242282/1‑128 (MQ=255)
                                                     tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGTAAAAAAAATA‑AATTTTTCCAATTATTAAaatttaca                                                                          >  1:5460818/1‑125 (MQ=255)
                                                        aCAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTT‑AAAAAAAAATATAATTTTAAAAATTATAtaaatttaaatt                                                                        >  1:1414202/1‑128 (MQ=255)
                                                         cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTAACAAATTTTATaatttcatct                                                                        >  2:3480129/1‑125 (MQ=255)
                                                             ccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAattaaaatttcaaa                                                                   >  2:3956483/1‑126 (MQ=255)
                                                             ccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑‑‑‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                <  2:2396561/128‑1 (MQ=255)
                                                               aaaTTCCCCTTTAAATTAAAATAAAATTATATAAATTTA‑AATTTTTTAAATAAAAATATTACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                 <  1:6353325/128‑1 (MQ=255)
                                                               aaaTTAACCTTTTAAATATAAAAAAATTATATAAATATA‑AATTTTTTAAATAAAAATATTA‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                 <  2:3193296/128‑1 (MQ=255)
                                                               aaaTACCCATTTAAATTCAAATAACATTAAATAAATATA‑AATTTTTTAAATAAAAATATTA‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                 <  2:1665382/128‑1 (MQ=255)
                                                                 aTTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAA‑‑TTTTTTTTTTTTTTTTTTAACAAAAATAAAATTTTAACAATTAATATaatttaaatttaaaaaat                                                                >  2:1025550/1‑121 (MQ=255)
                                                                  ttcaacTTTTAATTAAAATAAAATATTTTTAATATA‑AATTTTTTAAATAAAAATATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                               <  1:3228183/123‑1 (MQ=255)
                                                                  atCCCCTTTAAATAAAAAAAACATTATAAAAATATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                               <  2:5515675/127‑1 (MQ=255)
                                                                   tCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAAAATATAATTTTACAAATAATTAAAATTTAAATTTAACACTTGAAt                                                            >  1:2498326/1‑128 (MQ=255)
                                                                    acaatttAAATTAAAATAAAATTAAATAAATATA‑AATTTTTTAAATAAAAATATTA‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                            <  1:4077698/124‑1 (MQ=255)
                                                                     ttttttaaatttaaaTAAAATTTTTTAAATATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                            <  1:4611171/125‑1 (MQ=255)
                                                                     cccTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGTAACTAAAATATAATTTTACAAATTATTAAaatttcaatttaaaaaattaat                                                            >  2:2806375/1‑117 (MQ=255)
                                                                     cacTTTAAATTAAAAAAAAATTAAATAAATATA‑AATTTTTTAAATAAAAAAATTACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                           <  1:1704152/126‑1 (MQ=255)
                                                                     accTTTAAAATCAAAATAAATTATATAAATATA‑AATTATTTAAATAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                           <  1:3404566/127‑1 (MQ=255)
                                                                      ccTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACAAATTATTAAAATTTCAATTTCACAGATGAAttt                                                          >  1:6242917/1‑127 (MQ=255)
                                                                        ttttAATTAAAATAACATTATATAAATTAA‑AATTTTTTAAATAAAAATATTAAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAt                                                        <  2:2545573/128‑1 (MQ=255)
                                                                         tttaattttaaTATCATTATATAATCTTA‑AATTTTTTTAATAATAATATT‑TAAA‑‑TTTTTTTTTTTTTTTTGTAAGTTACATATTATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                       <  1:5207084/119‑1 (MQ=255)
                                                                          tAAATTCAAATATAATTATATAAATTTT‑AAATTTTTTAATAAAAAAATTAAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                      <  2:1987723/128‑1 (MQ=255)
                                                                          tAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTT‑‑GAAATAACATATAATTTTACAAATTATTAAAATTTCAATTTAACAAATAAATTTAttac                                                     >  1:4359267/1‑126 (MQ=255)
                                                                          tAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGTAAATAAAATAAAATATTACAAATTATTAAAAATTCAATTTCACAAATGAAtaaatta                                                      >  1:2848772/1‑122 (MQ=255)
                                                                          tAAATTAAAATAAAAATATAAAAATTTT‑AATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                       <  2:1869767/128‑1 (MQ=255)
                                                                          tAAATTAAAAAAAAATTATTTAAATATA‑AATTTTTTAAATAAAAAAATTAAAA‑‑‑‑ATTTTTTTTTTTTTCGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:4380873/128‑1 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATATTTTTAACAATTAATTCAATTTAAATTAAAAATATTAATTGAttt                                                      >  2:5149229/1‑128 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGTAAATAAAATATAATTTTACCAATTATTATAATTTAAATTTCAAATATTAATTTATttc                                                     >  1:5792691/1‑128 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  1:5875802/128‑1 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAAAAAAAATATAATTTTAACAATTATTTGAATTTAAATTTAACAGATGAatttatttg                                                     >  2:1295290/1‑127 (MQ=255)
                                                                           aaaTTAAAAAAACATTATTTAAATATA‑AATTTTTTAAATAAAAATATTA‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:3326091/128‑1 (MQ=255)
                                                                            aaTTTAAATAAAATTATATTAAATTA‑AAATTTTTTAATTAAAAAATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                     <  2:4623466/128‑1 (MQ=255)
                                                                              ttataaaaaaaTTATATAAATATA‑AATTTTTTAAATAAAAATAATAAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                  <  1:764403/118‑1 (MQ=255)
                                                                              ttCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTTATttctt                                                   >  2:5630342/1‑128 (MQ=255)
                                                                              ttCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACAAACAAAAAAATATACCAAATATTAAAATTTAAATTTAACAAATTAATAGATtactt                                                   >  1:4470190/1‑128 (MQ=255)
                                                                                 aaaTAAAATTTTATAAATATA‑AATTTTTTAAATAAAAATATTTAAA‑‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                              <  2:6057536/128‑1 (MQ=255)
                                                                                  aataatATTATATAAATATA‑AATTTTTTAAATAAAAATATTACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                              <  1:1232085/128‑1 (MQ=255)
                                                                                       cATTTTATAAA‑ATATAATTTTTTAAATAAAAAAATTA‑AAA‑‑TATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAAttt                                         <  1:668933/128‑1 (MQ=255)
                                                                                       cATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAACTTATAATTTTACCAATTTTTAGATTTAAAATTTAACATATTAATTCATTTATTCTACTTAttt                                         >  2:2908910/1‑128 (MQ=255)
                                                                                           taaataaattttaaTTTTTTAAATAAAAATATT‑TAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTc                                      <  2:1414202/116‑1 (MQ=255)
                                                                                           atataaatata‑aATTTTTTAAATAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                     <  1:5562261/128‑1 (MQ=255)
                                                                                           atataAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTT‑GAAAAAACAAAAAATTTTAAAAATTATTATAATTTAAATTTAAAAAAATAATTGATTTCTTATAAAAAtttttat                                     >  1:3840651/1‑124 (MQ=255)
                                                                                           atataAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                   >  1:1537086/1‑128 (MQ=255)
                                                                                            tataaatata‑aaTTTTTTAAAAAAAAATATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTGTTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                     <  2:5753120/128‑1 (MQ=255)
                                                                                            tataAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATAATTAGAATTTCAATTTAACATATTAATTGATTTCTAATAATAAttttagaa                                    >  2:2269610/1‑123 (MQ=255)
                                                                                            tataAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATAAGAATTTAAATTTCACATATTAATTTATTTATTATAAAAAtttttata                                    >  1:4970052/1‑123 (MQ=255)
                                                                                             ataAATTTA‑AATTTTTTAAATTAAAATATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                    <  1:3311362/128‑1 (MQ=255)
                                                                                             ataAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAAAATATAATTTTACCAATTTTTTTAATTTAAATTTCAAATATTAATTTATTTATTATAATAATTTTTatat                                   >  1:1116402/1‑128 (MQ=255)
                                                                                               aaaGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAAAAATAATTTTACCAATTATTATAATTTAAATTTCACATATAAATTTATTTATTATAAAAAATTTTatatat                                 >  1:1910706/1‑128 (MQ=255)
                                                                                                   aTA‑ATTTTTTTAAATAAAAATATTACAA‑‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGAt                             <  2:3044181/128‑1 (MQ=255)
                                                                                                   aTA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTT‑AAAAAAAAATATAATTTTACAAAATATTAAAATTAAAATACCAAAAATTAATTGATTTATACTAATAttttattttataattt                             >  2:2140581/1‑116 (MQ=255)
                                                                                                    tA‑AATTTTTTAAAGAAAAATATTACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                            <  1:5107100/128‑1 (MQ=255)
                                                                                                     a‑aaTTTTTTTAATTAAAATATTACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGt                           <  1:3709118/128‑1 (MQ=255)
                                                                                                     a‑aaTTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTAAATTACACAGATGAATTGATTTATTATAATAATTTGTATATATATATGt                           >  1:5993540/1‑128 (MQ=255)
                                                                                                        aTTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTTGAATTTCAATTTAACAGATGAATTGATTTCTTCTAATAATTTTTCTATATTGATtttt                         >  1:2597099/1‑128 (MQ=255)
                                                                                                         ttttttAAACTAAAAAATTACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttt                        <  2:5946755/128‑1 (MQ=255)
                                                                                                           ttttAAATTAAAATTTTAC‑AT‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                      <  1:5671552/128‑1 (MQ=255)
                                                                                                              tAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTATAATTTCAATTTCAAAGATAAATTGATTTCTTCTAAAAATTTTTATAATTAGATGTTTTTtata                   >  2:6618971/1‑128 (MQ=255)
                                                                                                              tAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGATTTATTATAATAATTTGTCTATATAGATGTTTTTTatat                  >  1:3924261/1‑128 (MQ=255)
                                                                                                                 ataaaatTATTAAAAA‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCTATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt                <  1:2299191/126‑1 (MQ=255)
                                                                                                                  taaaaaTATTAAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACTTATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt                <  1:6507684/127‑1 (MQ=255)
                                                                                                                  gAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAATATTAGAATTTCAATTTACCAGATGAATTTATTTATTATAATAATTTGTGTATATATATGTTTTTTATATCTaa              >  2:715664/1‑128 (MQ=255)
                                                                                                                    aaaaTATTA‑TAT‑‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCAAAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  1:4698160/128‑1 (MQ=255)
                                                                                                                    aaaaTATTA‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  1:1795250/128‑1 (MQ=255)
                                                                                                                     aaaatttAAAAA‑‑TTTTTTTTTTTTTTTAGTATCTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  2:1530290/123‑1 (MQ=255)
                                                                                                                     aaaTATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa             >  1:269460/1‑128 (MQ=255)
                                                                                                                     aaaTAATAAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAAt            <  1:1000582/128‑1 (MQ=255)
                                                                                                                         atTACAACTTTTTTTTTTTTTTTTTTGGAAAAAACATATAATTTTACAAATTATTAAAATTTAAATTTAAAAGATGAATTTATTTATTATAATAATTTTTATATATATATTTTTTTTTTATAAAAAta           >  2:502181/1‑127 (MQ=255)
                                                                                                                         atTACAAA‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGt        <  2:5827986/128‑1 (MQ=255)
                                                                                                                          ttACTAT‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTAACAATTATTAGAATTTCAATTTCTCAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGt        <  2:5409343/128‑1 (MQ=255)
                                                                                                                           tACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACAAATTATTATAATTTCAATTTAAAAGATGAATTTATTTCTTCTAATAATTTTTATATATATATGTTTTTTATATCTAAATAAGTg       >  1:6122136/1‑128 (MQ=255)
                                                                                                                                |                                                                                                                                 
AAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATA‑AATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76765‑77019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.