| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 203895 | 843 (0.260) | 530 (0.150) +TTT |
107/214 | 42.4 | 36.1% | intergenic (+279/+179) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase |
| ? | CP016816 | 203896 = | 955 (0.260) | intergenic (+280/+178) | JCVSYN2_00845/JCVSYN2_00850 | lipoprotein/inorganic diphosphatase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 643 total aligned reads displayed.
TTTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/203768‑203895‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG > CP016816/203896‑204022 |||| TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGT > 2:5161511/1‑128 TTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTAAAACGATTTCAAAGTGTATTTTTTAGGCTTGT > 2:4144959/1‑128 AATTTTTTTTATAAAAAAAAATAAAAATTTTTAATTTAAAGCCATTTTTAAAAAAGCCTTTGTTCTATGCTTTTTATTATAATTATCAAAATTAAAACGCTTTAAAATTGTATTTTTTAGGCTTGTTT < 1:844797/128‑1 ATTTTTTTTATAAAAAAAAATAAAAATTTTTCAATTAAATCCATTTGTAAAAAAGCCTATGTTCTAGGGTTTTTTTTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑T < 2:4812092/128‑1 TTTTTTTTAT‑AAAAAAAATTAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTT > 1:1956616/1‑128 TTTATTATAAAAAAAAAAAAAAATTTTTCATTTAAAGCCATTTTTAAAAAAGCATATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTT < 2:52610/128‑1 TTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTT < 2:5875786/128‑1 TTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACACCTCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTT > 1:5978846/1‑128 TTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCATATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTATTAGGCTTTTTT‑TTTTTT > 1:7168644/1‑128 TTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGACTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAATAGTATTTTTTATGCTTTTTT‑TTTTTT > 2:3863229/1‑128 TTTTATAAAAAAAAATAAAAATTTATCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTT < 2:5978709/128‑1 TTTATATAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGTCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTT > 2:3756957/1‑128 TTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTT > 2:7138911/1‑128 ATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAATCCTATGTTCTTGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTT < 2:2800608/128‑1 ATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTT > 2:4699038/1‑128 atAAAAAAAATAAATATTTTTCTTTTAAAGCAAATTGTAAAAAACCCTATGTTCTATGCTTTTTATTATACTTTTAAACATTACAACGCTTTCAAATTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTT < 1:6397214/126‑1 aAAAAAAAAATAAAAAATTTTAATTTAAATCCATTTTTAAAAAATCCTATTTTTTTGGCTTTTTATTATACTTATAAACATTACAACGCTTTCAAATTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTT < 1:1828449/127‑1 TAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGGTT‑TTTTTTTTTTT > 2:6208564/1‑128 AAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTT > 2:7833594/1‑128 AAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTT > 2:1897414/1‑128 AAAAAAAATAAAAATTTTTCATTTAAATCCATTTTTAAAAAATCCTATTTTATATGCTTTTTATTATACTTATAAAAATTAAAACGCTTTCAAATTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTT < 2:6726382/128‑1 AAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTgt > 2:4581248/1‑126 AAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTT > 1:6313703/1‑128 AAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGATCTAGTCTTTTTATTATACTTATCAACATTACAACTCTTTAAAATTGTATTTTTTAGGCTTTTTT‑TTTTTAATTTTTTT > 1:1325862/1‑128 AAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT > 2:5528123/1‑128 AAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT > 1:6512779/1‑128 AAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAAAGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT > 2:2158253/1‑128 AAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTaa > 1:6469294/1‑126 AATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTTTA > 2:2244442/1‑128 TAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAA > 2:2402845/1‑128 TAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAA > 2:6639059/1‑128 AAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTCTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTaaaaat > 2:5782652/1‑122 AAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTTTTT‑TTTTTTTTTTTTTTTTAAAAAAA > 1:4323944/1‑128 AAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAA > 1:1895872/1‑128 AATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTaaaattaaa > 1:6892289/1‑119 TTTTTCATTTAAAGCCATTTGTAAAAAAGCGTATGTTCTAGGCTTTTTATTATACTTATCAAAATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAATTAttt > 1:2200099/1‑125 TTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑TT‑TTTTTTTTTTTTTTTTGTAAAATTAAAA > 2:3390114/1‑128 TTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTG‑TTTTTTTTTTTTTTTTAAAAAAATAAttt > 1:4991124/1‑125 TTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAtaaa > 1:6725319/1‑124 CATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAAta > 2:2524885/1‑126 TTTAAATCCTTTTTTAAATAAGCCTATGTTCTAGGCTTTTTATTATACTTATAAACATTTACACGCTTTCAAAGTGTTTTTTTTAGGCT‑‑TTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATT < 1:2384868/128‑1 TTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAA‑AAAATTAAGATT > 2:3970374/1‑128 TAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑T‑AAATTAAAAGTAAGATTTt > 1:3375975/1‑127 TAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTt > 2:3552276/1‑127 CCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAAttttttctaca > 2:4458054/1‑117 TTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAA‑TAAAATTTttataaaaaa > 1:7890527/1‑118 TAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAGATTTGGATCAACCAAAA > 2:7685757/1‑128 TAAAAAAGCCTATGTTCTAGGCTTATTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTATAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAAGAAAGATTT‑GATTAAACAAAA > 1:4463116/1‑128 AAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑T‑AAAATAAAAATAAAATTTTCATCAACAAAAAa > 2:5637203/1‑127 AAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTGTTTAAACCAAAAatt > 2:2036070/1‑125 AAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAAAATTTTTATCAACCAAAAaaa > 1:6107962/1‑125 AAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACTCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATTTTTGGACAAACCAACAATAT > 2:1184283/1‑128 AAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTTGATGAAAAAAAAATATA > 2:5373591/1‑128 AGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTTGATAAACAAAAAATATAT > 2:6482680/1‑128 GCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAGATTTGGATAAACAAAAAATAaaaa > 2:2697134/1‑124 GCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAAAAAAATTAATATTTGGATCAACCAAAAATATtta > 2:7344661/1‑125 CCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAATTAAGATTTGGATAAACAAAAAATATATa > 2:3686314/1‑127 CTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTGTATCAACAAAAAATATATaa > 2:5028403/1‑126 CTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAAAATTTGTATCAACCAAAACTAaaaaa > 1:990233/1‑123 CTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGAAATATTTGTATAAACCAAAAATATATAAA > 2:6068971/1‑128 gaacaTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTAT‑AAAATAAAAGTAAAATTTGTAACAACCAAAACTATATAAAAA > 2:1616753/6‑128 TTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTTGTTAAACAAAAAATATATAAAAAAAA > 1:7605994/1‑128 TCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAATATTTTGTAAAACAAAAAATATATCAAAAAAA > 2:6943810/1‑128 CTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAAAAAAATTAAGATTTTGATAAACCAAAAC‑ATATTAAAAAAAat > 2:262780/1‑126 CTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑AAAAAATAAAAGTAAGAATTTGATCAACAAAAAATATATAAAAAAAAT > 2:1447882/1‑128 CTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAATATTTGGATAACCCAAAACAATATAAAAAAAATT > 1:1663746/1‑128 CTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGAATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAGATTTGGAGAAAACAAAAAAATATCATAAAAATa > 2:314489/1‑127 TAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATATAATTAATATTTGTATCAACCAAAAATATAAAAAAAAAATTt > 1:285297/1‑127 aTTTTTATAATAATTATCAAAATTACAACCCTTTAAAATTGTATTTTTTTTGAT‑‑TTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAA < 1:6203257/127‑1 TTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTGTATAAACCAAAACATTAAAAAAAAAATTAAAAA > 2:6543044/1‑128 TTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGTATAAACCAAAAATAAAAAAAAAAAATTAAAAAA > 2:6386834/1‑128 TTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTTATATTTTGTTAAACAAAAAATATATAAAAAAAATTAAAAAAA > 2:1801655/1‑128 tatttttaTTATCAACATTAAAACGGTTTAAAATTTTATTTTTTATG‑TT‑TTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATA < 1:7331726/120‑1 TTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTTATATTTTGATAAACCAAAAATATATAAAAAAAATTAAAAAAAAaat > 2:6342719/1‑125 TACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAAGATTTGTTTCAACCAAAACTAAAAAAAAAAAATTAAAAAAAATATTTa > 2:7050789/1‑127 TTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAA‑TAAGATTTTGTTAAACCAAAAATATAAAAAAAAAATTAAAAAAAAaatatttttt > 1:3624236/1‑118 TTACAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAATATTTTGATAAACCAAAAATATAAAAAAAAAATTAAAAAAAATAGTTTATTTGAGTTTAAA > 2:7559958/1‑128 CAACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTT‑TAAAAATAAAATTAAAATTTTGATAAACCAAAACTAATTAAAAAAAATTAAAAAAAATATTTTATTTGATTTTCAAAa > 1:6779857/1‑127 AACGCTTTCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAGATTTGGATCAAACAAAACTATATCAAAAAAAATAAAAAAAAAAGTTTATTTGAGTTTAAAAACT > 2:7274516/1‑128 TCAAAGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAATTAAGATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATAGTTTAGTTGATTTTAAAAaattaatata > 2:6254761/1‑118 TCAAAGTGTATTTTTTAGGCTTG‑TT‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTAAGTTTTGGATCAACAAAAAATATATCAAAAAAATTAAAAAAAATAGTTTTGTTGATTTTCAAtaaggaatat > 2:3083955/1‑118 AAGTGTTTTTTTTTTGCTT‑TTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATA < 1:7678157/128‑1 AGTGTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTT‑‑TAAAAATAAAAGTAAGATTTGGATCAACCAAAAATATATAAAAAAAATTAAAAAAAATATTTTATTTTAGTTTAAAATATGAATATATAtt > 2:2861489/1‑126 GTATTTTTTAGGCTTGTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTATTTGAGTTTAAAATATGCAAATATAGTA > 2:6122854/1‑128 ttttttttTTGTTTGTTTTTTTTTTTTTTTTGTATAAATAAAAGTAATATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAA < 1:4048108/120‑1 ttttttttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAA < 1:394598/120‑1 tttttTTT‑TTTTTTTTTTTTTTTTGTATAAATAAAAGTAAGATTTGGATCAATCAAAACTATATCAAAAAAATTTAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:5426808/123‑1 tttttTTT‑TTTTTTTTTTTTTTTTGTAAAATTAAAAGTAAGATTTGGATTAAACATAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:1050576/123‑1 tttttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAATAGTATGATTTGGATAAATAAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 2:4925143/123‑1 ttgttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAAACAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 1:7065077/123‑1 tgtttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTT < 2:843354/123‑1 ttttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACAAATACTATATAAATAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTA < 2:1270189/124‑1 tTTGTTT‑TTTTTTTTTTTTTTTTGTTAAAATATAAGTTAGATTTGGATCAAAAAAAACTATTTCAAAAAATTTAATATAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGATTTTA < 1:2722943/127‑1 ggttTTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTA < 1:6597457/124‑1 tttTTT‑TTTTTTTTTTTTTTTTTTAAATATAAAAGTAATATTTTGATTAAAAAAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATATGCATATATAGTACAAAGGAATTTAT < 1:5233863/125‑1 tttTTT‑TTTTTTTTTTTTTTTTGTAAATATATAAGTAAGATTTTTATAAAAATAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAT < 1:4699038/125‑1 tttTTT‑TTTTTTTTTTTTTTTTGTAAATATAAAAGTATGATTTTGATTAATTTAAATTATATTAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTAT < 1:5749392/125‑1 cttgT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATG < 1:2493907/124‑1 T‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG < 1:6284849/128‑1 T‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG < 1:5927907/128‑1 |||| TTTAATTTTTTTTATAAAAAAAAATAAAAATTTTTCATTTAAAGCCATTTGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTATTTTTTAGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/203768‑203895‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAG > CP016816/203896‑204022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |