Frequency Filtering Thresholds

Minimum Cutoff:       Maximum Cutoff:

Ignored Genes

Enter gene(s) separated by ',' ex: tpoB,folD

Ignored Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details
481286 257908 DEL Δ776 bp [crl]
564207 3560455 INS +G pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon intergenic (‑2/+1)
566843 2173363 DEL Δ2 bp pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC/pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC intergenic (‑1/+1)
644028 4296381 INS +GC glutamate/aspartate:proton symporter/Sel1 family TPR-like repeat protein intergenic (+587/+55)
673244 1979486 MOB IS5 (+) +4 bp IS1 repressor TnpA/universal stress protein intergenic (‑271/‑264)
1034671 13957 SNP A→T chaperone Hsp70, with co-chaperone DnaJ M599L (ATG→TTG)
1034672 101342 SNP C→T UDP-N-acetylmuramate:L-alanine ligase T193I (ACC→ATC)
1034715 6809 SNP T→G putative transporter K384T (AAA→ACA)
1035435 14011 SNP T→G chaperone Hsp70, with co-chaperone DnaJ S617A (TCT→GCT)
1102505 1978503 DEL Δ776 bp insB1,insA
1102506 3815859 DEL Δ82 bp [rph],[rph]
1102527 4183258 SNP G→A RNA polymerase, beta subunit E672K (GAA→AAA)
1120862 1293036 MOB IS2 (+) +5 bp global DNA-binding transcriptional dual regulator H-NS/thymidine kinase/deoxyuridine kinase intergenic (‑114/‑487)
1121050 2765440 DEL (TATGGCAC)6→3 CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4-57 prophage; uncharacterized protein intergenic (‑287/+50)

Starting Strain Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details