Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F9 I0 R1
|
131 |
136.1 |
2723430 |
98.1% |
2671684 |
229.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
989,901 |
G→T |
16.9% |
S152R (AGC→AGA) |
pncB ← |
nicotinate phosphoribosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 989,901 | 0 | G | T | 16.9%
| 172.3
/ 7.2
| 94 | S152R (AGC→AGA) | pncB | nicotinate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (28/46); new base T (12/5); total (41/53) |
| Fisher's exact test for biased strand distribution p-value = 2.80e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 |
GGCTGATTTGCTGATGTGCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGC > NC_000913/989666‑990138
|
ggCTGATTTGCTGATGTGCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAC‑GCCGGGAAG‑TCGGC‑GAATTTGCtt > 2:173858/1‑239 (MQ=255)
tttGCTGATGTGCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑Gc < 2:1354006/239‑1 (MQ=255)
gtgCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGGTTAAC‑‑CCGCGGAA‑GCGACATAATTTG‑TTTCCA‑GCGTGTCGaag > 1:1311075/1‑237 (MQ=255)
gCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGc < 1:659136/239‑1 (MQ=255)
gCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGc < 1:738982/239‑1 (MQ=255)
gCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTACTGTTGCAGACGCTTAACGATGGTTTCTTGTGCTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGc < 2:1076533/239‑1 (MQ=255)
ccTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAg < 1:61450/235‑1 (MQ=255)
ccTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAA‑GCCGCGAAG‑TGGAC‑TAAATTTTTTTTCA‑GCGGGTCGAggggt > 1:587505/1‑237 (MQ=255)
aaCCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAA‑GACGAGAAG‑GCGAC‑TCAATTGCTTTTCA‑GCGTGTTGGGGGCCTgcg > 1:731928/1‑238 (MQ=255)
ttCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTTAC‑GCCGTAAAG‑GAGGC‑GAATTTGCTTTCCT‑GCCGGTGTAGGGCGTgccggcag > 2:998206/1‑232 (MQ=255)
ttCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAA‑GCCCAGAAG‑TCGAC‑TAATTTTCTTTTCA‑CCGTGTCGAGGGGTTGCG‑CCAC‑g > 2:1175243/1‑238 (MQ=255)
ttCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTTAA‑GCCGCGAAG‑GCGGC‑TAATATGCTTTTCC‑CCCTGTCGAGGGACTGCG‑CGActg > 2:61450/1‑237 (MQ=255)
ccTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAA‑ACCGCGAAG‑ACGGC‑ACAATTTCTTTTCA‑GCGGGGTGTGGGCGTGCG‑GAAC‑GCCgggccgc > 2:557080/1‑234 (MQ=255)
cTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCg < 2:150905/239‑1 (MQ=255)
cTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAAGCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCg < 2:374055/239‑1 (MQ=255)
cTGTGTTCCCATCAGCGTGAGGGAAAGCCGACGCGCCAGTTAGTAGTGGCTGGGTCCTTCAAACCAGGATTCCTGTTGCAGACGGTTAACGATGGTTTCTTGTACTGCCCGAGACAGACGGCT‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCTACATATCAAGACCGGC‑GGTTAAC‑TCTGAGAAG‑TCGAC‑TAATTTTTTTTCCT‑GCGTGTCGAGGGCCTGCG‑CATA‑GTCGGCTTGCg < 2:1037453/239‑1 (MQ=255)
gtgtTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAC‑GCCGAGAAG‑ACGAC‑TAATTTGCTTTTCA‑GCGTGTCGGGGGGTTGCG‑CAAC‑GTCCGCCTGCGGt > 1:139925/1‑239 (MQ=255)
tgtTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAC‑GCCGAGAAGATGGGC‑AAATTT‑CTTTTCA‑GCGTGGCGAGGGCCTGCG‑CAAC‑CCCGGCCCGCgggg > 1:1009214/1‑237 (MQ=255)
gtTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTg < 2:366970/238‑1 (MQ=255)
cctccGGCGTGAGGGAAAGCCGCCGCGCCAGATCGTAGTTTCTGGTTCCCACAAACCAGGATTCCTGTAGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGagcga < 2:392466/235‑1 (MQ=255)
ccATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGagcga < 2:848897/239‑1 (MQ=255)
ccATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGagcga < 1:106280/239‑1 (MQ=255)
ccATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGagcga < 2:1349062/239‑1 (MQ=255)
aTCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTTAA‑GCCGAGAAG‑TCGGC‑TAATTTGCTTTTCC‑GCGTGTCGGGGGGTTTGG‑CCAC‑GTCGGCCCGCGGGGaggggta > 1:386035/1‑234 (MQ=255)
aTCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGGGAAG‑ACGAC‑CAATTTGCTTTTCA‑GCGCGTCGAGGGGTTTCG‑CAAC‑GTCGGCCGCCGGTGggcgat‑a > 1:884048/1‑239 (MQ=255)
gCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTAAC‑GCCCCGGAG‑GCGAC‑TAATTTGGTTTCCACGCG‑GTCGAGGGCTTGCG‑CAAC‑GTCGGGCTGCgggggggtgaagggg > 1:214580/1‑226 (MQ=255)
cGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGCTGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGCGAAG‑TCGGA‑CAATTTTTTTTTCA‑GCGTGTGCGGGGCTTGCG‑CAAC‑ATCCGCCTGCGGTGggcggt‑a‑tcgat > 1:531185/1‑239 (MQ=255)
cGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGagcgat‑a‑gcga < 1:1268279/238‑1 (MQ=255)
gTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATg < 2:1184633/239‑1 (MQ=255)
gTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATg < 1:660447/239‑1 (MQ=255)
tGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCCCGAAG‑TTGAC‑CAATTTTCTTTTCA‑GCGTGTCGCGGGCTTGCG‑CAAC‑CCCGGCGCGCGGTGggggat‑a‑gcgtagt > 1:261511/1‑235 (MQ=255)
gAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCa < 1:988885/238‑1 (MQ=255)
aGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGCGAAG‑TCGAC‑TAATTTGCTTTTCA‑GCGGGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGGGAGCGAT‑A‑GCGATGTACCATTTCTCTGCTAAACGCCCGCaaa > 2:1103907/1‑239 (MQ=255)
aGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTgcg < 1:1231273/180‑1 (MQ=255)
ggTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTTAC‑CACGAGAAG‑GACAA‑TAATTTGCTTTCCA‑GCGTGCCGCAGGCTTGCG‑CCAC‑GCCGCCCCGCGGTGTGCGGT‑A‑GCGGTGTCACATTTTACTGATAACCGCCAGCaacgacact > 2:7315/1‑231 (MQ=255)
gCCCACAACCCAGGATTCCTGTGGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAAAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTcc < 1:499147/238‑1 (MQ=255)
gCCAACAAACCAGGATCCCGGTGGAAGCCGCTTAACGATGTTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGAAATATCAAGCCCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTCCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTcc < 2:587505/238‑1 (MQ=255)
cccACAAACCAGGTTTCCTGTTGAGGACGCTTAAGGATGTTTTCTTGTACTTCGCGAGAAAAACGGCG‑AGGGGGGCAAAAATCCA‑TCAGAGGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCGGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑AAAC‑GTCGGCCGGGGGTGAGCGAT‑A‑GCGATGTACCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCa < 2:238203/239‑1 (MQ=255)
tCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTTCTTTCCA‑GCGTGTCGCGGGCTTGCG‑CAAC‑GTCGGCCCGCGGGGAGCGAT‑A‑GCGATGTACCCTTTTCCTGTCAACCGCCAGGAAAGGAAATTCCCCGAGGAGGACTTCAc > 2:908378/1‑238 (MQ=255)
tCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAA‑GCCGCGAAG‑GCGAA‑CAATTTTCTTTTCA‑GGGTGTCGAGGGCTTTCG‑CCAC‑GTCGGGCTGCGGGGGGCGGT‑A‑GCGATGTACCCTTTCACTGATAAACGCCAGCAAAGGAAATTCCCCGAAGAAGACtttcc > 2:1191028/1‑235 (MQ=255)
tGCAGCCGCTTAACGATGGTTTCTTGTCCTTCGCGAAAAAAACGGCG‑AGGGGTGCCAAAATCCA‑TAAGAGGGAGGCGCACCATAACAAGCCGGGC‑GGTTACC‑GCGGAGAAG‑TCGAT‑TAATTTGCTTCCCG‑GCGTGTCGAGGGTTTGCG‑CAAC‑GTCGGCCTGGGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACg < 2:26679/238‑1 (MQ=255)
tGCAGACGCTTAACGATGTTTTCTTGTACTGCGAAAAAAAAACGGCG‑CCGGGTGCCAAAACCGA‑TCAGATGGAAGCGGGACATATCAAGCCCGGC‑GGTTAAC‑GCCGAGACG‑TCGAC‑TATTTTGCTTCCGA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGGGCGAT‑A‑GCGATGTCCCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACgg < 2:82009/239‑1 (MQ=255)
gCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGGTTAC‑GCCGAGCAA‑GCGAC‑TAATTTGCTTTCCA‑GCGGGGCGGGGGGCTGCG‑GAAC‑GGCGGCCTGCGGTGAGCGATAA‑GCAGTG‑ACCCTTTTACTGATAACCGCCAGCAAAGGGACTTCCCCGCGGATggatttcccccaccg > 2:195995/1‑224 (MQ=255)
gCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATACCAAGACCGGC‑GGTTAAA‑GCCCAGAAG‑TCGAC‑CAATTTGTTTTCCA‑GCGGGTTGGGGGGTTGCGACAAC‑‑TCGGCCTCCGGGGGGCGAT‑A‑GCAGTGTGCCATTTTCCTGGTAAACGCCAGCAAAGGAACCTCCCAGAGGACGGCTTCCcaccactg > 2:363273/1‑236 (MQ=255)
gataacggttGGTTTTTTGATCTTCG‑GAAAAAAACCGTGCACGGGTGCAAAAATCCA‑TAAGATGAAGTCGCAAAATAGCAAGACGGGC‑‑GTTAACGGCCGAGAGG‑CCGAC‑TATTTGGCTTTCCA‑GCGTGTCAGGGGCTTGCG‑AATC‑GTCGGCCTGCGGTGGGCATT‑G‑GCAATGTCCCTTTCCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑Ctt < 2:1125025/230‑1 (MQ=255)
aaCGATGGTTTTTTGTACTTGGAGAAAAAAACGGCG‑AGGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGCCCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTGGAGGGCTTGCG‑AAAC‑GTCGGCCTGGGGTGAGCGAT‑A‑GCGATGTCCCTTTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAAc < 1:557080/239‑1 (MQ=255)
ggTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGGGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAA‑GGCGGCCTGCGGTGAGCGGT‑A‑GCGATGTACCATTTTACTGATAACCGCCAGCAAAGGAACTTCCCCGAGGATGACTTCACGCCCCGGGCCG‑CTTAAACGAata > 1:641121/1‑238 (MQ=255)
ggTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAA‑ACGAC‑TAAATTGCCTTTCA‑ACCGGTCGAGGGGTTGCG‑CACC‑GTCGGCCCGCGGGGAGGGCT‑A‑GAGGTGGACCCTTTTTCTGATAACCGGCCGAAAAGGGACCTCCCAGCGGGAGAATTTACGCCACGGGGCG‑CTTAAAAGAata > 2:510409/1‑238 (MQ=255)
tCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTTCTTTTCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGGTGTACCATTTCACCTATAACCCCCAGCAAAGGAACTTTCCCGAGGGTGACCTCACGCCACGGGCCG‑CTTTAACCAAAATccc > 2:455202/1‑237 (MQ=255)
tCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCCAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCCGGTCGAGGGCTTGCG‑CAAC‑CTCGGCCCGCGGTGGGCGCA‑A‑ACGATGTACCCTTTTCATGTTAACCCCCAGCCAAAGAACTTCCCCCAGGATTACTTCCCCCCACGGGCCC‑CTTAAACgccaacccc > 2:625725/1‑230 (MQ=255)
cTTGTACTGCGCGAAAAAAACGGCG‑AGGGGTGCAAAAATCCA‑TCAGAGGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTCCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTGGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGc < 1:1103907/239‑1 (MQ=255)
tgcgagagaAAAACGGCG‑A‑GGGGGCACAAACCCAGACAGGTGAACGCGGGAAATATCAAGCCGGGG‑GGTAACC‑GCCGAGAGG‑CCGTC‑TAATTTTCTTTCCA‑GGGTGTCGAGGGTTTGCG‑AACC‑GTCGGCCGGGGGTGGGCGAT‑G‑GCGATGTACCTTTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCAt < 2:733590/234‑1 (MQ=255)
tccgggaaaaaaaCGGCG‑CCGGGTGCCAAAATCTA‑TCAGATGGAAGCGCGACATATCAAGACGGGC‑GGTAAGC‑GCCGAAATG‑TCGAC‑AAATTCTCTTGCCA‑GCGTGTCGAGGGCTTCCG‑CAAC‑GGCGGCCGGCGGTGAGCGAT‑A‑GCGATGTCCCATTCCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCAt < 2:47946/231‑1 (MQ=255)
tccgcgAAAAAACCGGCG‑CGGGGGGCCAAAGCCCT‑ACCGAGGGAACCGCGAAATAACAAGCCCGGC‑GGGTACC‑CCCTAGATT‑CCGAC‑AAATTTCTTTTCCA‑GCGTGGCGAGGGTTGGCC‑CACC‑GTGCGCCTGCGGTGGGTGAT‑A‑GCGATGTCCTTTTCCACGGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCAt < 2:252479/237‑1 (MQ=255)
cgcgGGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCCAGAAG‑GTGGC‑TAATTTGCTTTCCA‑GCGGGTGGAGGGCTTGCG‑CCAC‑GGCGGCCCTCGGGGGGCGGT‑ATGGCTTGGACC‑TTTTACTGATAAACGCCCGCCAAAGAACGTCACCAAGGGTGGCATTCCGCCACCGGCCGCCTTaaaaaaaaaacacgcttcccata > 2:754975/1‑219 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGGGGGGTTGCG‑CAAC‑GTCGGCCCGCGGGGAGCGCG‑A‑GCGATGGACCATTTTCCTGATAACCCCCCGCAAAGGGACTTTCCCGAGGGTGACTTCACGCCCCCGGCCG‑CTTAAAACAATAACCacccttccctct > 2:1294113/1‑228 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑GCGAC‑TAATTTGCTTTCCC‑GCGTGTCGGGGGCTTGCG‑CAAC‑GTCGGCCTGCGGGGAGCGAT‑A‑GCGATGTACCATTTTACTGATAAACGCCAGCAAAGGAACTTCCCCGAGGATGACTTCACGCCCCGGGCCG‑CTTAAACGAATATCCAACTTGCCCTTa > 1:1160199/1‑239 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAA‑GCCGAGAAG‑TCGAC‑TAATTTGGTTTTCA‑GCGTGTCCGGGGCGTGCG‑CCAC‑GTCGGGCTGCGGTTAGCGAG‑A‑GCGATGTACCATTTTAATGATAACACCCAGCCAAGGAACTTCCCAGAGGATGGCGTTACGCCACGGGCCG‑CTTAAACGAAAAACCAACCTGCCagtt > 2:291933/1‑236 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGCTAAC‑GCCGCGAAA‑TCGGC‑TAAATTTCTTTCCC‑ACGTGTCGAGGGTTTGCG‑CAAC‑GCCCGCCTTCGGTGAGCGAC‑A‑GCGCTGGACCATTTGCCTGATAACCGCCAGCATCAGAACCTCCCAGAGGGTGACTTCCTCCCCCAGGCCG‑CCTTCACGAATACTGACCCTGCCATTa > 2:1232069/1‑239 (MQ=255)
aaaaacCGGCG‑ACGGGTGCCAAAATCCA‑TAAGATGGAGGCGCGAATTACAAAGGCGGGC‑GGTTAAC‑GCCGAAAAG‑TCGAC‑TAATTTGTTTTCCA‑GCGTGCGGAGGGCGTGCG‑AAAC‑GCCGGTGGGCGGTGAGCAAT‑A‑GCGATGTCCCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGt < 2:641121/237‑1 (MQ=255)
aaaacCGGCG‑GCGGGGGCAAAAACCCA‑GCAAGTGGAGGCGCGAAAAATCAAGCCGGGC‑GTTTACC‑GCCGAAAGG‑TCGAC‑TAATTTGCTTTCCA‑GGGTGTGGAGGCTTTGCG‑AAAC‑GTCGGCCGGGGGGGAGCGAT‑G‑GCGTGGTACCATTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTg < 2:71015/239‑1 (MQ=255)
aaaaCGGCG‑ACGGGTGCCAAAACCCA‑TCAGAGGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTgg < 1:455202/239‑1 (MQ=255)
ggcg‑gcGGGTGCCAAAATCCA‑TCAGAAGGAAGCGCGACATAACAAGACCGGG‑GGTTAAC‑GCGGAGAAG‑CCGAC‑TAATTTGCTTCCCA‑GCGGGGCGAGGGCTGGCG‑CACC‑GTCGGCCGGCGGTGAGCGAT‑A‑GCGATGTACCATTCCACGAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACg < 2:1190240/239‑1 (MQ=255)
gcg‑gcgGTTGCAAAAACCAC‑TAAGAGGGAGCCGCGACATAACAAGCCGGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTTCTTTCCA‑GCGTGCCGAGGTTTTGCG‑CACC‑GTGGGCCTGCGGTGAGCGTG‑A‑GCGATGTCCTATTTCATTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATAGCCAGCTTGCCATTATCGTTGGACACg < 2:1315994/238‑1 (MQ=255)
gagggggGCAAAAACCCA‑TCAGAGGGAAGGGAAACATACCAGGCCCGGG‑TGTTACC‑GCCGAAAAG‑CCGAT‑TAATTTGCTTTCCG‑GGGTGTCGAGGGTTTGCG‑AACG‑GTGGGCCTGCGGTGGGAGTT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGt < 2:731928/235‑1 (MQ=255)
ccAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGCGTTGAGGGGTTGCG‑CCAC‑GTCGGCCCGCGGTGAGCGAT‑A‑ACGATGTACCATTTTACTGATAACAGCCAGCAAAGGCACTTCCCACAGGATGACTTCACCCCCCGGGCCG‑CTTAAACCAATATCCAGCCTGCCCTTTTCGTTGGACAACGGGAC‑Ttttt > 2:767963/1‑238 (MQ=255)
aaaaaCCCA‑TGAGATGGAAGCGGGACATATCAAGACCGGC‑GTTTACC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTCCCA‑GCGTGTCGAGGGCTTGCG‑AAAC‑GTCGGCCTGGGGTGAGCGAT‑A‑GCGATGTACCTTTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTc < 2:386035/237‑1 (MQ=255)
tCCA‑TCAGATGGAAGCGCGACAAAGCACGCCCGGT‑GTTTACC‑GCCGAGAAG‑TCGAC‑TATTTTGCTTTCCG‑GCGTGCCGAGGGCTTGCG‑CACC‑GTCGGCCTGCGGTGAGCTAT‑A‑GCGATGTCCCATTCCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGtt < 2:150269/239‑1 (MQ=255)
ccA‑TCAGATGGAAGCGCAACTTATCAGGCCCGGC‑GGTTACC‑GCCGAGAAG‑TCGCT‑TATTTTGCTTCCCG‑GGGTGTGGAGGGCTGGCG‑CAAC‑GCCGGCCGGCGGGGAGCGAT‑G‑GCGAGGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTa < 2:1160199/239‑1 (MQ=255)
cA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCCAGAAG‑TCGAA‑TAATTTGCTTTTCA‑GCGTGGCGAGGGGTTGCG‑CCAC‑GTCGGCCCGCGGGGAGGGGT‑A‑GCGATGTACCATTTCCATGATAACCCCCCGCACAGGGAATTTCCCGAGGATGGCTTTACGCCACGGGCCC‑CCTAAACGAAAATCCAGCTTGCCCTTCTCGTTGGACACGGCGCC‑TTTTTCCGGGGTac > 2:1287093/1‑238 (MQ=255)
ggAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGGTTGCG‑CAAC‑GGCGGCCTGCGGTGAGCGGT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGGTGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCCTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAACGGa > 1:1022130/1‑237 (MQ=255)
aacgcggcaCATAGCAAGCCCGGC‑GTTAACC‑GCCGAGAAG‑GCGAC‑TAATTTGCTTCCCG‑GGGGGTCGGGGGCTTGCG‑CAAC‑GTCGGCCGGGGGTGAGCGAT‑A‑GCGATGTACCATTCCCCTGATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGaa < 2:884048/229‑1 (MQ=255)
aaGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAA‑TCGAC‑TAATTTGCTTTTCC‑GCGGGTCGAGGGCCTGCG‑CAAC‑GGCGGCCTGCGGGGGGCGGG‑A‑ACGATGTACCCTTTTACCGATAACCGCCCGCCAAGGAAATTCCCCCAGGATGACTTCACGCCACGGGCCG‑CGTAAACGAAAATCCCCATTGCCCTTATCTGTGGACACAGGGGC‑ATTGTCCGGGGTTAAGCGGGAcac > 2:289260/1‑237 (MQ=255)
gaaagctcacggcgggc‑ggTTAGC‑GCGGAGAAG‑TCGCC‑TAATTTGCTTTCCG‑GCGTGTCGAGGGCTGGCG‑AAAC‑GCCGTCCTGCGTGGAGGAAT‑G‑GCGAAGAACCAGTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:531185/225‑1 (MQ=255)
gACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCG‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGTTGAGCGAT‑A‑GCGATGTACCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 1:1175243/239‑1 (MQ=255)
gcacgatcagggcgggtggTTAAC‑GGCGCGAAC‑GCGAC‑TAATCTTCTTTCCA‑GCGTGGCGCGGGCTTCCG‑AAAC‑GCCGGGCTGCGGTGAGCGAG‑A‑GCTATGTACCTTCTCTCTGATACCCGCCGGCAAAGGAACTTCCCAGAGGATGGCTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:306707/222‑1 (MQ=255)
caatatCAGGCCCGGG‑GGTTAAC‑GCCGAGAAG‑TCGAC‑AAATTTGTTTCCCA‑GCGTGTGGGGGGTTGGCG‑CAAC‑GTCGCCCGGGGGTGAGCGAG‑A‑GCGATGTACCATTTCACTGAAACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:139925/236‑1 (MQ=255)
acaaaacAAGACCGGG‑GGTTAAC‑GCCGAGAAG‑TAGCT‑TAATTTGTTTCCCA‑GCGTGGCGAGGGCTTGCG‑AAAC‑GCGGGCTGGGGGTGGGCGAT‑A‑GCGATGTCCCATTCCACTGATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:314892/232‑1 (MQ=255)
agaatagcgccggggggTTAAC‑GCGGAGATG‑TAAAC‑GATTTCGCTTTCCG‑GCGTGGGGGGTGCTTGCG‑CAGC‑GTCGGCCGGCGGTGGCGGAT‑A‑GTGATGTACAATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:897168/222‑1 (MQ=255)
atCAAGACCAGC‑GCTTAAG‑CCCAAAAAC‑TCGTG‑CAATTTGTTCTCCT‑GCGTGACGAGGGCTGGCA‑CATC‑GACAGCTTGCGGTAAGTCAT‑A‑AGGTTGTACTAATCCCCGAAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCAAGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGCGTTAAAGCAGAACTCGCGTAACCAGt < 2:1220753/239‑1 (MQ=255)
aaaGCCCGGC‑GGTTAAC‑GCGGAGAAG‑TGGAC‑TAATTTGCTTTGCA‑GCGTGTGGAGGGTTTGCG‑CAAC‑GTGGCCCTGCGGTGAGGAAT‑A‑GCGTTGTACAATTTCATGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTa < 1:980556/238‑1 (MQ=255)
cggc‑ggTTTAC‑GCCGAGAAG‑TCGAC‑TAATTTTCTTTTCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GGCGGCCTGCGGGGAGCGAT‑A‑GCGATGTACCATTTTACTGATAACCGCCCGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGGGAC‑TTGTTCCGGGTTAAAACGGGACTCGCGCAACCCGTTAAGATAg > 2:120841/1‑239 (MQ=255)
ggc‑gtTTACC‑GCCGAAAAG‑TCGAC‑TAATTTGCTTTCCG‑GCGTGTCGGGGGCTTGCG‑AAGC‑GGGGCCCTGCGGTGAGCGAT‑A‑GCGATTTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:448960/239‑1 (MQ=255)
ggc‑ggTTAAC‑GCCGAGACG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCGGGGGGGAGCGAT‑A‑GCGATGTCCCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:1287093/239‑1 (MQ=255)
gggggTTAAC‑GCGGAGAGG‑TCGAC‑AAATTTGCTTTCCA‑GCGTGTGGAGGGCTTGCT‑CAAC‑GTCGGCCGGCGGTGGGGTAT‑G‑GCGATGTACATTTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGGTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:414600/236‑1 (MQ=255)
gc‑ggTTACC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGTTTGCG‑CAAC‑GCCGGCCTGGGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:173858/238‑1 (MQ=255)
gc‑ggTTAAC‑GCCGGGAAG‑TCGAC‑TAATTTTCTTTCCA‑GCGGGTCGAGGGCTTGCG‑CAAC‑CTCGGCCTGCGGTGAGCGAT‑A‑GCGATGGACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCCGAGGGTGACTTCACGCCCCGGGCCG‑CTTAAACGAATATTCCGCTTGCCATTATCGTTTGACACCGGGAC‑TTGTTCCGGGGTAAAACGGGAATCGCGGCACCAGTTAAGATAATc > 2:1256634/1‑239 (MQ=255)
gc‑ggTTAAA‑GCCGCGAAG‑TCGCC‑TAAATTTCTTTCCA‑GCGGGTCGAGGGGTTGCG‑CAAC‑GCCGGCCCGCGGTGAGCGAT‑A‑GCGATGTACCATTTCAATGATAACCGCCAGCAAAGGAAATTCCCCCAGGACGCCTTCACGCCCCGGGCCG‑CTTAAACGAACATCCCACTTGCCATTATCCTTGGGCCCGGTGACTTTTTTCTGGGTAAAAGC‑GCACCCGCGTAACCCGTTTAGATa > 2:1074776/1‑236 (MQ=255)
tatggCCGAGAAG‑CCGAT‑TATTTGCCTTTCCA‑GCGGGTCG‑GGGGTTGGC‑CAACAGTCGGCTGGCGGGGAGGCAG‑A‑GCGATGTCCCATTTCACTTATAGCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCt < 2:373708/235‑1 (MQ=255)
agaAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTaaagaaa > 2:335453/1‑239 (MQ=255)
tCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAggcag > 1:406275/1‑239 (MQ=255)
aTTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGaa > 1:305231/1‑239 (MQ=255)
aTTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGaa > 1:197312/1‑239 (MQ=255)
tGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CACC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGc < 1:1276399/239‑1 (MQ=255)
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GGCTGATTTGCTGATGTGCCTGGAACCATTCGTGTGCCTGTGTTCCCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGC‑GGTTAAC‑GCCGAGAAG‑TCGAC‑TAATTTGCTTTCCA‑GCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTGCGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGC > NC_000913/989666‑990138
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
