Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F18 I0 R1 274 115.5 2655328 86.7% 2302169 226.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,921,260 T→G 12.2% G346G (GGT→GGG)  rsmF → 16S rRNA m(5)C1407 methyltransferase, SAM‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,921,2600TG12.2% 195.3 / 2.9 91G346G (GGT→GGG) rsmF16S rRNA m(5)C1407 methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base T (32/41);  new base G (12/3);  total (47/44)
Fisher's exact test for biased strand distribution p-value = 2.10e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTAGAGTTTTTACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGA  >  NC_000913/1921026‑1921490
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                        
aGTAGAGTTTTTACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCATGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGAAATTTTCCTTTCAGCCCGGGGCAAGATCCCGAAGCAGGACAAATCCTTCAGGCGGCTACAGGGGTTg                                                                                                                                                                                                                                      >  1:791125/1‑239 (MQ=255)
 gTAGAGTTTTTACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGGGTTgg                                                                                                                                                                                                                                     >  2:969559/1‑239 (MQ=255)
       tttttACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTACCGCCTTACCCGCCCCCAAATACAAAGCCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGGGTTGGCTTaaa                                                                                                                                                                                                                               >  2:419546/1‑239 (MQ=255)
         tttACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTaa                                                                                                                                                                                                                                >  2:683178/1‑236 (MQ=255)
         tttACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTAGTCTGCGTAAAACTCAGGCGATTCCGGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTAAGCCCGGGGAAAGATCGCGAAGCTGGCCAAATTCGCCAGCCGGCTCAAGGTGTTGGCTTaaatt                                                                                                                                                                                                                             >  2:891348/1‑237 (MQ=255)
          ttACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGACAGATCGCGAAGCTGGCCAAATTCGTCAGGCGGCTCCAGGGGTTGGCTTAAACTg                                                                                                                                                                                                                            >  2:132184/1‑239 (MQ=255)
            aCCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGGCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGGGTTGGCTTAAACTgtg                                                                                                                                                                                                                          >  2:1294422/1‑237 (MQ=255)
                 ttatcGATCTCTTCCCTGGTGCAGACAAAGCGCTGACCGCAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAATAACAAAGTCGGTAATTTTCCGTTCAGCCCGGGGAAAGATCCGCAAGCTGGAACAATTCGTCAGGGGGCACCAGGGGTTGGATTAAACTGGGATGa‑a                                                                                                                                                                                                                    >  1:35719/5‑239 (MQ=255)
                 ttGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTCCGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCTCCCCAATACAAAGCCGGTAATTTTCCGTTCCGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTCCAGGTGTTGTCTTAAACCGGGGTGa‑a                                                                                                                                                                                                                    >  1:55064/1‑239 (MQ=255)
                           ctTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTgcgc                                                                                                                                                                                                           >  2:976707/1‑238 (MQ=255)
                                   gTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCa                                                                                                                                                                                                   >  2:13857/1‑238 (MQ=255)
                                   gTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAg                                                                                                                                                                                                  >  2:1121578/1‑239 (MQ=255)
                                   gTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGGGTTGGCTTAAACTGGGATGA‑AAACCACCGGCTCTggaaa                                                                                                                                                                                                  >  2:1279191/1‑236 (MQ=255)
                                    tGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTCCCGGTGTTGGGTTAAACGGGGAGGA‑AAACCTGCGCCTCTGGCAgg                                                                                                                                                                                                 >  1:126449/1‑238 (MQ=255)
                                      caaacaaaGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCCAATACAAAGTCGGTAATTTTCCGTTAAGCCCGGTGAAACAACCCGAAGCTGGCCAAATTCGTCAGGCGGCTAAAGGGGTGGGCTTAAACTGGGATGA‑AAAACtcgccccccggaacgcg                                                                                                                                                                                               >  1:942378/1‑223 (MQ=255)
                                        aacaaaGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCCGCCCGGTGAAAGATCGCGAAGCTGGCCAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGTTGA‑AAACCTCGCCCCCTGGCAGCTTGa                                                                                                                                                                                             >  2:1326104/1‑239 (MQ=255)
                                        aacaaaGCGCCGACCGAAGAAGGCGTTTTGCATGTCTTCCCACAAA‑GTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTCCGTAAAACTCAGGCTATTCCAGCCTTACCAGCACCCAAATCCAAAGTCAGTAATTTTCCGTCCAGCCAGTGGAAAGATCACAAAGCTGGACAAATTCGCCTGGCGGCTACAAGAGGTGACTAAAAATAGGGACA‑AAACCTGCACCCCCGCCAGccgaa                                                                                                                                                                                             >  1:25234/1‑235 (MQ=255)
                                         acaaaGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGTCGGCTACAGGGGGTGGCTTAACATGGGATGA‑AAAACTGCACCCCCGGCAGGGGGAc                                                                                                                                                                                            >  1:578862/1‑239 (MQ=255)
                                          aacggccttGACCGAAGATGGTTTTTTGCATTTTTTCCAAAAAA‑TTTCCGCTCGGGAAGGCT‑TTTTCGTTCCCAGTCTGGCTAAACCTCGGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACa                                                                                                                                                                                           <  1:219767/231‑1 (MQ=255)
                                          aaagggctttgccgggagtgtttttttGCTTTTTTCCCCAAAAA‑TTTCCCACGGCGAAGGTT‑TCTGGTTTGGCTGTTTGCGAAAATCTCAGGTCATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACa                                                                                                                                                                                           <  1:206347/217‑1 (MQ=255)
                                              gcgcTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGCAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCACCAGGGGTTGGCTTAAACTGGGGTGA‑AAACCTGCGCCCCTTGCAGCGGGACaaaaa                                                                                                                                                                                       >  1:1309172/1‑237 (MQ=255)
                                                              gCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGAGTTGGCTTaaa                                                                                                                                                                                                                               >  2:1059620/1‑184 (MQ=255)
                                                              gCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCACCAACTACAAAGTCGGTAATTTTCCGTTCCGCCCGGTGACGGCTCGCGAAGCTGGAACAATTCGTCGACCGGCGCCCGGTGTTGGCTTAAACTGGG‑TGAGAAACCTCGGGCCCCGGCGAGGTGACAAAGAAAGGGGGTGGTTACCg                                                                                                                                                                       >  1:1327419/1‑239 (MQ=255)
                                                                   ttccttGTTTCCCCACAAA‑TTGACGACGGGAAAGGCT‑TCTTCTTTGCCCTCCTGCGAAAACCTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTggg                                                                                                                                                                  <  2:915226/234‑1 (MQ=255)
                                                                        gtttttCCCACAAA‑TTTACGCGTGCGAAGGCT‑TCTTCGTTGCCTGTCGTCATAAACCTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTg                                                                                                                                                             <  2:64242/237‑1 (MQ=255)
                                                                              ccccCAAATTTTGCGACTGAG‑AGGCTCTCTTCGTTGCTCGTTGGCTGGAGTCTGAGGGGACTCCCCCCTTTCCCGTCCCCAAATACAAAGTCGGTAATTTTCCGATCAGCGCGGTGAAAGAACGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTAGCTTAAACTGGGATGA‑AAACCTGCGCCTCTAGCAGCGTGACAAAGAACTGAGGTTGTTCCCGGTGGGCATTGAAGcc                                                                                                                                                        <  1:715565/239‑1 (MQ=255)
                                                                                       tttCCGACTGCGAAGGCT‑TCTGCTTTGCTCGTCGGCGTAAATCTGAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGt                                                                                                                                               <  2:188882/239‑1 (MQ=255)
                                                                                                gCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGa                                                                                                                                      >  2:202771/1‑239 (MQ=255)
                                                                                                 cGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACCGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCCCTGGCACACGGACAAAAAACTTGGGTGTTTCCCGGGGGGCCTTGAAGCCCCGATCGGaaaaacccgtt                                                                                                                                     >  1:864684/1‑232 (MQ=255)
                                                                                                 cGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGGGGGCATTGAAGCCCTGATCGGTAAAGTCCGAt                                                                                                                                     >  2:1172021/1‑239 (MQ=255)
                                                                                                 cGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAAATGGGGTGA‑AAACCGGCGCCTCTGGCCCCCGGACAAAGAACTGTGGGTGTTCCCGGGGGGCGTTGAAGCCCGGCAGGGTAAAATCGGAt                                                                                                                                     >  1:682646/1‑239 (MQ=255)
                                                                                                        cttttccGTTGCTCGTTTGGGAAAAACCCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTtct                                                                                                                                <  2:813783/232‑1 (MQ=255)
                                                                                                            ttcGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGGGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTTCCGGTGGGCATTGAAGCCCTGGACGGAAAAATACGGTTTTTTCGGtg                                                                                                                           >  1:1056362/1‑238 (MQ=255)
                                                                                                            tgggtgccctgTCTGCATAAACCCCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGtt                                                                                                                           <  2:791125/229‑1 (MQ=255)
                                                                                                            tcctttGCTCTTCTGGTTAAACCCCAGGGGATCCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGtt                                                                                                                           <  2:517090/235‑1 (MQ=255)
                                                                                                                     cGTCTGCGTAAACCCGAGGCGATCCCCGCCTTACCCGCCCCCAAATACAAAGGCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTaa                                                                                                                  <  2:343874/239‑1 (MQ=255)
                                                                                                                           cGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACCAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATAGGTAAAGGCCGATTTTCCCGGTTGGGGGTTAAAGTTg                                                                                                             >  1:893760/1‑238 (MQ=255)
                                                                                                                             tAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTCCAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTTGCAGCGTGACAAAGAACTGTGGGTGTTCCCGGGGGGCCTTGCAGCCCTGATGCGAAAAGTCCGATTTTTTCGGGTGGGGAATAAAATTggaa                                                                                                          >  1:684421/1‑236 (MQ=255)
                                                                                                                                  ctcggtcGATCCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACg                                                                                                     <  2:295950/233‑1 (MQ=255)
                                                                                                                                  cTCAGCCAATCCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACg                                                                                                     <  2:35719/239‑1 (MQ=255)
                                                                                                                                   cggtgctttccccGACTTACCCGCCGCAAAATACAAAGTCGGTAATATTCCGTTCATGCCGGTGAAAGCTCGCGAAGCTGGACAAATTCGGAAGGCGGCTACAGGTGTTGGCTTAAGCTGGGATGA‑ACACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCGCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGAGTAAAATTGCCGAGACGc                                                                                                    <  1:1046082/229‑1 (MQ=255)
                                                                                                                                   ccAGGCGTTCCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGc                                                                                                    <  2:893760/238‑1 (MQ=255)
                                                                                                                                     aGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCACGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGGTCCCGGTGGGCCTTGAAGCCCTGACAGGGAAAGTCCGATTTTCTCGGTTGGGGGTTAAACTTGCCGAGCGGcac                                                                                                  >  1:131767/1‑239 (MQ=255)
                                                                                                                                     aGGCGATTACCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAACTTCGTCAGGCGGCTACAGGTGGTGGGTTAGACTGGGATGA‑AAACCTGCCCCCTTGGCGGCGTGCCACAGAACTGTGGTCGTTCGCGGTGGGCATTGGAGCCCCGATCGGTAAATGCCGATGTTTGCGGTTGGGGATTAAACTTGCCggcacgaag                                                                                                  >  1:304661/1‑231 (MQ=255)
                                                                                                                                          ttccccGCCTTACCCCCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCacaaca                                                                                              <  1:1172021/235‑1 (MQ=255)
                                                                                                                                          atccccGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGGCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCacaaca                                                                                              <  2:1169070/235‑1 (MQ=255)
                                                                                                                                            tCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGCGACGCACAACAAAg                                                                                           >  2:135469/1‑239 (MQ=255)
                                                                                                                                                     aCCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACCGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGGTGTTCCCGGCGGGCATTAAAGACCTGATCGGCAAAGGCCGATTTTCTAGGTTGGGGAATAAAATTGCCCAGAGGCAAAAAAAAGGtaaaacga                                                                                  >  1:504521/1‑232 (MQ=255)
                                                                                                                                                      cccGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTg                                                                                 >  2:1171609/1‑239 (MQ=255)
                                                                                                                                                       ccccccccAAATACAAGGTCGGTAATTTGCCGTTCAGCCCGGTTAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTgg                                                                                <  1:1109358/236‑1 (MQ=255)
                                                                                                                                                         gCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGGGAAGCTGGACAAATTCGGCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGgca                                                                              <  2:1309172/239‑1 (MQ=255)
                                                                                                                                                            cccAAATACCAAGTCTGTAATTTTCCGTTCCGCCCGGTAAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTTTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGgcagca                                                                           <  1:490870/239‑1 (MQ=255)
                                                                                                                                                            cccAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGGGGGCATTGAAGCCCTGATCGGTAAGGTCCGGTTTTCTCGGTTGGGGATTAAAATTGCCGAGAGGCCCCACAAAGGTTATCCCTGgcggca                                                                           >  1:714261/1‑239 (MQ=255)
                                                                                                                                                            cccAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGGGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCCTGACAAAGAACTGTGGTGGTTCCCGTGGGGCATTGCACCCCTCACCCGTGAAGTCCGCTTTTCCTGGTGGGGGGTTGAACTTGACGGAGCGCCCAACCAAGGTTACCGCTGgcagcc                                                                           >  1:242134/1‑238 (MQ=255)
                                                                                                                                                                aaTACAAAGTCGGTAATTTCCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGaa                                                                       <  2:304661/239‑1 (MQ=255)
                                                                                                                                                                aaTACAAAGTCGGAAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGGGTTGGCTTAAACTGGGATGA‑AAACCTCCGCCTCTGGCACCGTGACAAAGAACTGTGGTTGTTCCCGGGTGGCATTGAAGCCCTGATCGGTAAAGTCCGGTTTTCTCGGTTGGGGATTAAACTTGCCGGGACGCACAACAAAAGTTATCGCTGGCAGCATGaa                                                                       >  1:1289680/1‑239 (MQ=255)
                                                                                                                                                                  tACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGc                                                                     <  2:131767/239‑1 (MQ=255)
                                                                                                                                                                     aaaGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGAGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCGCTGGCAGCGTGACAAAGAACTGTGGGTGTTCCCGGTGGGCATTGAAGCCCTGACCGGTAAAGGCCGATTTTCTCGGTTGGGGATTAAACTGCCCGAGACGCGAGACAAAAGATATCGCTGGCAGGATCaaaaggt                                                                  >  1:997888/1‑234 (MQ=255)
                                                                                                                                                                       aGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCCCTGGCAGCATTAACCGGTTa                                                                >  1:903243/1‑239 (MQ=255)
                                                                                                                                                                       aGTCGGTAATTTTCCGTTCAGCCCGGGGAAATATCGCTAAGCTGAACAAATTCGTCAGGTGGCTACAGGCGTTGGCTTTAACTGGGATGA‑AAAACTGCGCCTCTGGAAGCGTGACAAAGAACTGTGGTTGTTCCCGTGGGGCCTTAGACACCTGATCGGTAAACGCCGATTTTTCAGGTTGGGGGCTAACCTTGCCGGGACGCACAAACAAGGGTATCGCTggacgatggaagagggaa                                                                >  1:691457/1‑223 (MQ=255)
                                                                                                                                                                         tCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGGAACGCACAACAAAGGTTATCCCTGGCAGCATGAAGCGGTTAtt                                                              >  2:816679/1‑239 (MQ=255)
                                                                                                                                                                          cGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTAt                                                               <  2:24755/237‑1 (MQ=255)
                                                                                                                                                                            tttaTTTTCCGTTCGGCCTGGTGAAAAGTCGGGAAGCTGGACAAATCCGTCGGGCGGCTACAGGTTTTGGCTTAAACTGGGATGA‑AACCCTGCGGCTCGGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGct                                                           <  1:13857/236‑1 (MQ=255)
                                                                                                                                                                            tttaTTTTCCGTGTACCACGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGTGGCTACAGGTGTTGCCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGct                                                           <  1:563194/236‑1 (MQ=255)
                                                                                                                                                                            ttAATTTTCCGTTCAGCCCGGTGAAAGATCGAGAAGATGGACAAATTCGTCAGGCGGCTACAGGTTTTGGCTTAAACTGGGATGA‑AAAGCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACg                                                                                                     <  2:286250/196‑1 (MQ=255)
                                                                                                                                                                            gTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGct                                                           >  2:165134/1‑239 (MQ=255)
                                                                                                                                                                            gTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAAACGGACAACAAAGATAATCACTGgcagcagaaagagggatatga                                                            >  1:641183/1‑223 (MQ=255)
                                                                                                                                                                             tatttttCCGGTCGGCCCGTGGAAAGGTCGCGAAGCGGGACAAATGCGTCGGGCGGCGACAGGGGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGctc                                                          <  1:202771/236‑1 (MQ=255)
                                                                                                                                                                                  ttCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGcc                                                     <  2:903243/239‑1 (MQ=255)
                                                                                                                                                                                      gttaaccggggTGAAAAAGCGGAAAGCGGGACAAATTGGTCGTGGGGCGATAGGTGTTGGCTTAAACGGGGAGGA‑AAACCTGGGCCTCTGGCAGCGTGAAAAAGAACTGTGGTTGTGCCCGGTGGTCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAAAAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTGTTGCCTCAc                                                 <  1:1098639/230‑1 (MQ=255)
                                                                                                                                                                                      gTTCCGCCCGGTGAAAGGTCGGGAAGGTGGACAAATTCGGAAGGCGGCTAAAGGTTTTGGCTTAAACTGGGATGA‑AAACCCGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCAc                                                 <  2:766874/239‑1 (MQ=255)
                                                                                                                                                                                      gTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCAc                                                 <  2:578862/239‑1 (MQ=255)
                                                                                                                                                                                        tCAGCCCGGAGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCAcc                                                <  2:504521/238‑1 (MQ=255)
                                                                                                                                                                                          aGCCCGGTGAAAGGTCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGa                                             <  2:83603/239‑1 (MQ=255)
                                                                                                                                                                                           gCCCGTTGTAAGACCGCGAAGCTGGACAAATTCTGCAGGCGGCTACAGGTGTTGGATTAAACTGGGATTA‑AACCCTGCGCCTTGGGCAGCGTGACAAAGACCTGTGGTTGTGCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCCGCATGAAGCGGTTGTGGCTCTTGCCTCTCCCGat                                            <  1:251158/239‑1 (MQ=255)
                                                                                                                                                                                            cccGGGGAAAGATCGAGAAGCTGGGAAAATTCGTCCAGCGGGTCCAGGGTTGGGCTTAAACTGGGATGA‑AAACCTGGGCCTCTGGCAGCGTGACAAAGAACTGGTGTTGGTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGat                                            <  1:968693/238‑1 (MQ=255)
                                                                                                                                                                                             ccGGGGAAAGATCGAGAAGGTGGACAAATTCGTCAGGGGGTTAACGGTGTTGGCTTAAACTGGGATGA‑AACCCTGCGCCTCTGGCAGCGTGTCAAAGAACGGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGa                                             <  1:1121578/236‑1 (MQ=255)
                                                                                                                                                                                                    aaGATCGCGAAGGTTGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGaa                                   <  2:195622/238‑1 (MQ=255)
                                                                                                                                                                                                         ctggAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACGGGGATTA‑AAACCGTCGGCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTTATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCCCCCGATAAT‑ATGAATGCAtt                             <  1:1005298/236‑1 (MQ=255)
                                                                                                                                                                                                         cgcgAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCAtt                             <  2:682646/239‑1 (MQ=255)
                                                                                                                                                                                                           cgAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTa                                                                <  2:949836/203‑1 (MQ=255)
                                                                                                                                                                                                           cgAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGAATGAAGCGGTTa                                                                >  1:949836/1‑203 (MQ=255)
                                                                                                                                                                                                           cgAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGGTGGGGGTTAAACTTGCCGAGACGCACAACAAAGATTATCGCTGGCAGCATGAAGGGGTTATGCGCCTTCCCTCACCCGCAAAA‑AGGAAGGCAtatg                           >  1:955885/1‑236 (MQ=255)
                                                                                                                                                                                                              aGCTGGACAAAGTCGTCAGGCGGCTACAGGTGTTGGCTTAAACGGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGc                        <  2:1327419/239‑1 (MQ=255)
                                                                                                                                                                                                                   gACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGac                    >  2:881432/1‑238 (MQ=255)
                                                                                                                                                                                                                    gaaaaTTCGGGAGGGGGCGAAAGGGGGTGGTTTAAACTGGGATTA‑AAACCTTGCCCCCTGGAAGCGGGAAAGAGAACGGGTGTTGTTGCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTAGTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGaca                   <  1:822694/236‑1 (MQ=255)
                                                                                                                                                                                                                          tCGTCAGGCGGCTACAGGTGTTCGCTTACACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAGTCCCTGATCGGAAAAGACCGGTTTTCTCGTCTGGGGATTAAACTTGCCGAGACGCACAACACAGGTTATCGCTGGCAGCATAAAGTGTTTATTGCCGTTGCCT‑ACCCCGTAATAATAAATACACACAAACTGACACCACAga            >  1:14489/1‑238 (MQ=255)
                                                                                                                                                                                                                                  cggcTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGACACCGCAGGAAGCgg      <  2:684421/237‑1 (MQ=255)
                                                                                                                                                                                                                                   ggcTACAGGTGTTGGCTTAAACTGGGATGA‑AACCCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGACACCGCAGGAAGCggag    <  2:126449/238‑1 (MQ=255)
                                                                                                                                                                                                                                   ggcTAAAGGTTTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGACACCGCAGGAAGCggag    <  2:942378/238‑1 (MQ=255)
                                                                                                                                                                                                                                    gcTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGCTATTGCTCTTGCCTCACCCGATAAA‑ATGAAGGCATTCGGGCTGAAACCGCAGGAAGCggagga  >  2:1276152/1‑239 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                        
AGTAGAGTTTTTACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAA‑TTTACGACTGCGAAGGCT‑TCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGA‑AAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAAT‑ATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGA  >  NC_000913/1921026‑1921490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A