Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,145,868 |
A→G |
10.6% |
E868G (GAG→GGG) |
yegE → |
putative diguanylate cyclase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,145,868 | 0 | A | G | 10.6%
| 308.2
/ 4.9
| 125 | E868G (GAG→GGG) | yegE | putative diguanylate cyclase |
| Reads supporting (aligned to +/- strand): ref base A (48/61); new base G (10/5); total (59/66) |
| Fisher's exact test for biased strand distribution p-value = 1.66e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 129 total aligned reads displayed.
TGACTATCACTTTATATGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCATCTCCCTC > NC_000913/2145632‑2146106
|
ggACTTTCCCTTTATATTGTAAGGCCGTGTGCATCGGGTAGGGGCCAGTGCCGGGATTGCCTTGATTGATGACAACAATCATCAGGCGGTAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAAGGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAgaga < 1:1278229/238‑1 (MQ=255)
tCACTTTATATGGGAAGGCCGTGTGCATCGGGTAGGTGACAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAGAAATGGTGGCCGGGGCCGGGTGCCGGCTTACGAACCGCAGCAGACTGCCGCACATAGCCAACCGGCGGGGAGGTAGCTTGAGGAACA‑GTGGCGGC‑AGATTCAagaaacggagg > 1:827183/1‑231 (MQ=255)
gttttgtGGGAAGGCCGGGGGCAGCGGGTGGGGGCCAGTGCCGGGATTTCCTTTATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTAGGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTtgat < 1:75966/233‑1 (MQ=255)
tataTGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACATCAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTtgatga > 2:245770/1‑239 (MQ=255)
tttGGGAAGGCGGTTGGCATGGGGCTGGTGCCAGGGCCGGGATTTCCTTGATTGAGGACAACAATCATCAGGCGGCAGAAGGGATGTCGCAGGGTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGGGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGatgatg < 1:321270/237‑1 (MQ=255)
tatGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTCCGAACCGCAGCAAGCTGCCACACATAGCGAACGGGCGGCGATGTCGCTTGCTGAACA‑GTGGCGGA‑TGATTACAAAGAATCAGTtgggtat > 2:882828/1‑233 (MQ=255)
tatGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGCACA‑GTGGCGGT‑TGATTAAAAGGAATCAGTTgatgat > 2:823825/1‑238 (MQ=255)
tatGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCCAGTgatgat > 2:416848/1‑238 (MQ=255)
tatGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATACCGAACGGGCGGCGATGTCGCTTGGTGAACA‑GGGGCGGC‑TGGTTAAAGAGAATCAGGttatgga > 2:41450/1‑236 (MQ=255)
tGGGAAGGCCGTGTGCATCGGGTAGGTTCCAGTTGCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCt < 2:139604/239‑1 (MQ=255)
gAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGGTTACGACCCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGGGGA‑TGGTTACAGAGAATCAGTtgggggaagccc > 1:456672/1‑228 (MQ=255)
aaGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGGGGTGTCGCCTGCTGAACA‑AGGGCGGA‑TGATTAAAAAGAAACaagtggtgttgttccg > 1:145220/1‑223 (MQ=255)
aaGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTTAAGGGAATCAGTTGATGATGCCCGc > 2:410591/1‑238 (MQ=255)
aaGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTGGc > 2:855960/1‑238 (MQ=255)
ggCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGGGAATCAGTTGATGATGCTCGccc > 2:559517/1‑238 (MQ=255)
ggCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCGGCCGCACATAGCGAACGGGCGGCGAGGGCGCTTGATGAACA‑GGGGCGGAGTGATTAAagaaagcagattatggaggcccccc > 1:719108/1‑216 (MQ=255)
ttttcATCGTGTAGGTGGCAGTGTCGGGATTACCTTGATGTATGGCAACAATCATCGGGCGGAAGAAGGGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAGTCAGTTGATGGTGCAGGCCCACGgtg < 1:7500/235‑1 (MQ=255)
tCGGGTAGGTGCCGGTTCCGGGTTTTCCTGTGTTGATGACCACCATCATGCGGCGGCAGAAGGTATGGGGGAGGCTTATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCtt < 1:118929/239‑1 (MQ=255)
tCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATCAACA‑GTGGCGGA‑TGATTAAAGAGAAACCATTGGTGATGCTCGCCCACGGTGGCGCt > 2:479560/1‑238 (MQ=255)
cGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGGGTCGCTTc > 2:111019/1‑239 (MQ=255)
tggTGCCAGTTCCTGGTTTGCCTTGGTTGTTGACAACAAGTATCAGGCGGCAGAAGTGATGTTGAAGGCTGATTACGCCTGTTATGCCTCCAAAAATGGGGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCa < 1:636363/237‑1 (MQ=255)
cggggccgtggCCGTGTTTTCCTGGGTTTATGACTACAATCATCAGGCGGCAGAAAGGATTGCCGAGGGTGATAGCGCCTGTTAGGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCa < 1:89018/228‑1 (MQ=255)
aGGTGTCAGTGGCGGGATTTCCTTGATTGATGACAACAATCAGCAGGCGGCAGAAGTGATGGCGTAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCa < 1:1219677/238‑1 (MQ=255)
aGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCa < 2:719108/238‑1 (MQ=255)
gCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTtga < 2:1187217/205‑1 (MQ=255)
aGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGGTGAACG‑GTGGCGGG‑TGCTTTAAGAGAAACAGTTTGAGATGCTCTGCCCCGGGGCGGCGTCGCCC‑CGGAGccc > 1:904106/1‑239 (MQ=255)
gcGGGTTTTCCTTGATTTATGCCAAAAATCCTCAGGCGGCAGAAGGGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGa < 1:416848/237‑1 (MQ=255)
gggATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAg < 2:904106/238‑1 (MQ=255)
ttACCTTGGTTGATGACAACAATTCACAGGCGGGAGAAGTGGTGTCGGCGGCTGGTATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGcgc‑g < 1:559517/238‑1 (MQ=255)
attgatGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACTGGGGGCGATGTCGCTTGAGGAACA‑GTGGGGGG‑AGATTAAAGCGAATCAGGTGGTGATGCTCGCCCCCGGGGTCGCTTCGCAC‑CGGTACCCGGAAgcaggacaatttgg > 1:622674/1‑227 (MQ=255)
attgatGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACC‑GGGGCGGG‑TGGTTAAAGAGAACCAGGTTGTGGTGCTCGCCCACGGGGTGGGGTCGCAC‑CGGGACCCCGAAGCGA‑GAAAATtggg > 1:1196583/1‑237 (MQ=255)
attgatGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGG‑TGGTTAAAAGGAACCAGTTGTTGTTGGCGCCCCACGGCGCCGCGTCGCCACCGGACCCCgagcgcgggaaaatgtg > 1:1208056/1‑223 (MQ=255)
attgatGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGGTTCAAGAGAATCCGTTGATGATGCTCGCCCACGGCGTCGCTTCGCCC‑CGGATCCCGGAAGCGC‑CGAATTtgtg > 2:745789/1‑239 (MQ=255)
attgatGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTTAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGGGC‑GGAATTtgtg > 2:909350/1‑239 (MQ=255)
attgatGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑AGATTAAAGAGAATACGTTGAGGATGATTGCCCACGGTGTCGCTTCGCCA‑CCGAACCCGGAAGGGCTGAAATTtgg > 1:414808/1‑238 (MQ=255)
tttattacaacaATCTTCAGGGGGCGAAAGGGATGTGGGTGGCTGATTCCGCCGTTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTgg < 1:410591/233‑1 (MQ=255)
tgatgaCAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTgg < 2:914131/238‑1 (MQ=255)
tgaCAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGG‑GTAAttttgggccgg > 2:289466/1‑231 (MQ=255)
tgaCAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GGAAATTGTGGCGGa > 2:705605/1‑239 (MQ=255)
tgaCAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAAGGAATCAGTTGATGATGCTCGCCCACGGGGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTTGGGCTGa > 2:1074592/1‑239 (MQ=255)
tacaacaATCAACAGGGGGCAGAAGGGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGAt < 2:622674/238‑1 (MQ=255)
taaaacaaTCATCAGGCGGCAAAAGTGATGTCGCAGGCTGATGTCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGAt < 2:1083934/236‑1 (MQ=255)
acaccaATCAGCAGGCGGCAGAAGTGATGGCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGAt < 1:245770/238‑1 (MQ=255)
caacaaTCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGAt < 2:456672/237‑1 (MQ=255)
aaTCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACt < 2:860629/239‑1 (MQ=255)
atcctcAGGCGGCAGAAGTGATTGCGCAGGCTGATATCGCCTGTTATGCCCACAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACtt < 1:115562/239‑1 (MQ=255)
atcaGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGCACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATAAGTTTATGATGCACGCCCACGGTGGGCCTTCCCCC‑CCGATCCCGGAAGCGG‑GAAATTTGTGGCTGAttttctttaa > 2:640792/1‑231 (MQ=255)
cggcAGAATTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGctc < 2:125637/236‑1 (MQ=255)
gcAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GCAATTTGTGGCTGATTTCACTTAAGCTCTGGAg > 2:838574/1‑239 (MQ=255)
cAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGGGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑CTAATTTGTGGCTGATTTCACTTAAGCTCTGCAGt > 2:1149510/1‑239 (MQ=255)
gtggcggtgggttatatCGCCTGTTATCCCTCCAAAAAGGGGGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAgg < 1:111019/226‑1 (MQ=255)
gTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGc < 2:145220/238‑1 (MQ=255)
gTCGCAGGCTGATATCGCCTGTTAGGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGc < 2:209093/238‑1 (MQ=255)
gCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGGGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTTCCTTAAGCTCTGGAGTTGCGAAggtggga > 2:32824/1‑234 (MQ=255)
ggCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGGGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGTTGATTTCATTTAAGCCCTGGAGGTGc > 2:1132939/1‑226 (MQ=255)
cTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAACGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGACGGC‑GGGtttatt > 2:886457/1‑239 (MQ=255)
gagatCGCTTGTTAAGCCTCCAAAAAGGGGGGCCGGGGCCGGGGGACGGTTTAGCAACCGCAGCAAGCTGGCGGACATAGCGAACGGGCGGCGATGGCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATtga < 1:847620/236‑1 (MQ=255)
tatCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAATTGCGAAGGC‑GGGATTATtgatg > 2:691029/1‑239 (MQ=255)
taacGCTTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATtgatg < 2:137454/236‑1 (MQ=255)
ccTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTggg > 2:1049836/1‑209 (MQ=255)
ccTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGGGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTTTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GCGATTATTGATG‑aacaa > 2:430061/1‑239 (MQ=255)
tGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCCCTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑aacaaac > 2:1213485/1‑239 (MQ=255)
tGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GGGATTATTTGTG‑AACAAACA‑TTtc > 2:820709/1‑239 (MQ=255)
ccccgaaaaTGGTGGCCGGGGGCGGGTGACGTGTTACGAACCGGAGCAAGCTGCCGCACATAGAGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTtcgtc < 1:895609/234‑1 (MQ=255)
tCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTTTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AAAAAACA‑TTtcgtcg > 2:1107744/1‑239 (MQ=255)
tgtggGCGGGGCGGGTGGGAGGTTTGTGAACCAGAGCATGCTGCCGCGAATAGCGAACGGGCTGTGTTTTCTCTTGATGAACA‑GTGGCGTA‑TGAATAAAGAGAATCAGTTGATGATGCTCGTCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAg < 1:39773/238‑1 (MQ=255)
cgggGGACGGTTTAAGAACCGGAGACAGGTGCCGGAAGTTGCGAACGGGCGGGGATGGCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCt < 1:289466/239‑1 (MQ=255)
ggTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGACGATCGGCCACGGGGGCGCGTCGCCC‑CGGAACCCGGAAACGC‑GGAATTTGTGGCGGGTTTTCATTAAACCCTGGAGTTTCGGAGGC‑GGGATTATTGGTT‑AACAAAAA‑TTTAGTCCTaagttcgagggacgcggccata > 1:272542/1‑218 (MQ=255)
gACGGTTTCCGTCCCGCAGCAGGCGGCCGCCCATGGGGAACGGGCGGGGATGGCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCG‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGcc < 1:161255/239‑1 (MQ=255)
gcGGTTTACGGACCGGAGCAAGGGGCCGTACTGAGAGAAGGGGGGGTGGTGTCGCTTGATGAACA‑GGGGCGGA‑TGATTAAAGAGAATCAGGTGATGATGCTCGCCCACGGTGTCGCTTCGGCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGcc < 1:886457/237‑1 (MQ=255)
actgTTTACGAAACGCAGCAAGCTGCCGCACATAGGGAACGGGCGGCGATGTCGTTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGcc < 2:1195686/235‑1 (MQ=255)
aCGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGcc < 2:250255/238‑1 (MQ=255)
gTTTAGGAACCGCGACAAGCTGCTGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATg < 2:1316653/238‑1 (MQ=255)
tttACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCTGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCAGATGCGC‑GTAATTTGTGGCTGa < 2:706020/150‑1 (MQ=255)
tttACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAAGCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTACGCTCCGGAGTTGGGAAGGG‑GGAATTATTGATG‑AA‑AAACACTTTCGTCGTAGTTTCAGGGATCCGGGTCTTAGCCAtc > 1:751143/1‑236 (MQ=255)
gaacggcatgaagtgtctgCACTTAGCGAAGTGGCGGTGATTGCGCTTTATGAACA‑GTGGCTGA‑TGATTAAACAGAATCAGTTGATGATGATTGCCCCCGGGTTCCCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTTTGGAGGTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTATCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGa < 1:561251/221‑1 (MQ=255)
aCCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACC‑GTGGCGGA‑TGGTTAAAAGGAATCCGTTGATGATGCTCGCCCACGGGGTCGCTTCGCCA‑CGGATCCCGGAAACGC‑GGAAATTGTGGCGGGTTTGCCTTAAGCTCTGGAGTT‑CGGAGGCGGGGATTTTTGCTGTAACAAA‑T‑TTTAGTCGTAGCTTAAACGGTCCGGAGCTTAGCCagagctttgacc > 1:596861/1‑228 (MQ=255)
aCCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGGTTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GGGATTCTTGATG‑AACCAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCCCTTGAc > 2:734494/1‑238 (MQ=255)
cGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCa > 1:1033802/1‑110 (MQ=255)
cGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCa < 2:1033802/110‑1 (MQ=255)
gcagcaAGCTGGCGAACATAGCGAGCGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGAccgcc < 1:330721/239‑1 (MQ=255)
aggggcccgaaaatgggAACGGGGGGGGATGGCGGTTGATGAACA‑GTGGGGGA‑TGATTAAAGGAAATCAGTTGATGATGCTCGCCCACGGTGTCGGTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTa < 1:430061/222‑1 (MQ=255)
cGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACg > 2:214541/1‑239 (MQ=255)
aTAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGgcg < 2:606518/200‑1 (MQ=255)
aGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑tt > 2:1204323/1‑173 (MQ=255)
cGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGAGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTAACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCAGGCTCTTGTCCGCCGGGGATTCCCAGAATTTTTc > 2:1141156/1‑238 (MQ=255)
aaCGGGGCGGGATTTTGCTTGATGAACAGGTGGCGGA‑‑GGTTAAAGAGAATCAGTTGATGATTCTCGCCCCCGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCcag < 1:412199/239‑1 (MQ=255)
gggggcgGTGTGGCTTGATGAACA‑GTGGGGGA‑TGAATAAAGAGAATCAGTTGATGATGCTCGCCCCCGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCcagca < 1:735163/234‑1 (MQ=255)
gATGTCGTTTGATGAACA‑GTTGCGGA‑TGATTAAAGAGAATCAGTTGATGATGC‑CGCCCACGGTGGCGCTTCGCCA‑CGGATCCCGGAAGCGA‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCaa < 2:1245354/238‑1 (MQ=255)
attttgCTTGATGAACA‑GTGGGGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCaa < 1:823825/233‑1 (MQ=255)
cGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GGAATTTGTGGCTGATTTCACTTAAGCTCTGGGGTTGCGCAGGC‑GGGATTATTGATT‑AACAACAC‑TTTCTTCGTCACTTCATCGCTCCGGGGCTTAGCCATGCTCTTTACCCCGTGGAGTTCCAAGCATTTTTCCGCCGGGCCCCaaaaagg > 1:989968/1‑236 (MQ=255)
cGCTTGAGGAACA‑GGGGGGGT‑TTATTAAAGGGAACCGGGTGAGGGTGCTCGCCCACGGTGTCGCTTGCCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCg < 1:1269128/239‑1 (MQ=255)
ttGATGAACA‑GTGGCTGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGtt < 2:414808/239‑1 (MQ=255)
acgggggCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTa < 2:772184/234‑1 (MQ=255)
ggA‑TTATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCAt < 2:23220/238‑1 (MQ=255)
ttAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGTTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGTTG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCCTGCTCTTGACCGCCGGGGATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCAt > 2:372423/1‑238 (MQ=255)
ttAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCTATCCGGCGCTTAGCCATACTCTTGACCGCCGGGGATTCACCGGATTTTTCCACCAGGCCCCAAAAGCGGTTGCCAGAAAAggagaaaacatc > 1:1108886/1‑229 (MQ=255)
ttAAAGAGAAGCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTTGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCAt < 2:408740/238‑1 (MQ=255)
ttAAAGAAAATCGGTTGTTGATGCCCGGCCACGGTTTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGGGGCTGCTTTCACTTAAGCTTTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCAt < 1:1119002/238‑1 (MQ=255)
agaATCAGTTGATGATGCTCGCCCCCGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGG‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCATctccctc < 2:1196583/239‑1 (MQ=255)
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TGACTATCACTTTATATGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACA‑GTGGCGGA‑TGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCA‑CGGATCCCGGAAGCGC‑GTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGC‑GAGATTATTGATG‑AACAAACA‑TTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCATCTCCCTC > NC_000913/2145632‑2146106
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
