Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F18 I0 R1 274 115.5 2655328 86.7% 2302169 226.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,253,208 T→G 11.8% V65G (GTG→GGG)  ubiA → p‑hydroxybenzoate octaprenyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,253,2080TG11.8% 264.5 / 2.3 108V65G (GTG→GGG) ubiAp‑hydroxybenzoate octaprenyltransferase
Reads supporting (aligned to +/- strand):  ref base T (32/57);  new base G (14/4);  total (47/61)
Fisher's exact test for biased strand distribution p-value = 1.48e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

AACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGTATACCCATCTACCGCAAGT  >  NC_000913/4252971‑4253445
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                              
aaCTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGCCTGGCTGATGCG‑GCCTGCCGggtgggtg                                                                                                                                                                                                                                               >  2:795282/1‑239 (MQ=255)
   ttttttttCCGGCGTTCCCGTTGTACTAAGGGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAAGGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTgtggtg                                                                                                                                                                                                                                            <  1:719260/237‑1 (MQ=255)
   tttttttCCCGGTGTCTCCGTTGTACGAAGAGAAAAAAAAGTGGGAGGGGGGTCTGACGCAAAAAAAGCGGGTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGGTGCGCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCTGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTgtggtg                                                                                                                                                                                                                                            <  1:199385/237‑1 (MQ=255)
      ttttCCCGGCGTCCCCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGaa                                                                                                                                                                                                                                          <  2:1309302/238‑1 (MQ=255)
      ttttACCGGGGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGATTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGaa                                                                                                                                                                                                                                          <  2:331723/238‑1 (MQ=255)
          aCCGGCGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGGGTCTGGTGGATGTG‑CGCTGCCGGATGTGTGGTGAATggtg                                                                                                                                                                                                                                     >  2:623975/1‑236 (MQ=255)
               tgttaCCGTTGTACTAAGAGAAAAAAAATATGGAGTGGAGTCTGACGAAGAATAAGCGTCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCt                                                                                                                                                                                                                                <  1:905680/235‑1 (MQ=255)
               cGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGGTGGC‑CGCTGCCGGATGGGGGGGGAATGAtttt                                                                                                                                                                                                                                   >  2:447360/1‑234 (MQ=255)
               cGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTAt                                                                                                                                                                                                                                   >  2:8347/1‑236 (MQ=255)
                     cGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGc                                                                                                                                                                                                                          <  2:148687/239‑1 (MQ=255)
                     cGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCGGTTGCG‑CGCTGCCGGATGCGGGGGGAATGGTTGTGCTGccccc                                                                                                                                                                                                                          >  2:890683/1‑237 (MQ=255)
                     cGTTGTACGAAGAGGAAAAAAATATGGAGTGGAGGCTGGCGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGc                                                                                                                                                                                                                          <  2:1035298/239‑1 (MQ=255)
                         gTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGGGTTGTGGGTGGCGACACCGGCGGTTCCCCAGCCCTGGATCCTGGCGGTGTTTGGCCCGGGGGGCGGGCTGGGGCG‑CGC‑GCCGGGTGGggggtgggggggttttgtgtaccccaggt                                                                                                                                                                                                                     >  1:1290308/1‑216 (MQ=255)
                            cTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGCCACCGGGCGTTCCCCAGCCCTGGATCCTGGCGGGGTTTTTCGCGGGGGTCTGG‑TGGTGTGCCGCTGCCGGCTGGGGGGGGAATGAtttttgtgcccgccgggttg                                                                                                                                                                                                                   >  1:1035859/1‑221 (MQ=255)
                            cTAAGAGGAAAAAA‑‑ATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGGGGGGTGCATGATTATGCTGGCCGCAGGttttag                                                                                                                                                                                                                 >  2:695565/1‑236 (MQ=255)
                             tAAGGGGAAAAAAATATGGAGTGGAGTCCGAAGCAGAATTAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCA‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGa                                                                                                                                                                                                                  <  2:1223625/239‑1 (MQ=255)
                             tAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGa                                                                                                                                                                                                                  <  2:41751/239‑1 (MQ=255)
                                    aaaaaaaTATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGCTGCG‑CGCTGCCGGATGTGGGGGGATTGTTTATGGTGCCGGCAAGTTTTATGGTCAt                                                                                                                                                                                                           >  2:647862/1‑239 (MQ=255)
                                    aaaaaaaTATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGGGTTGGGCTGATGGG‑CGGTGCCGGATGGGGTGGGAGTGATTATGCGGACCGGAAGttgtggtggcat                                                                                                                                                                                                           >  1:41751/1‑229 (MQ=255)
                                    aaaaaaaTATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATCATGGGCGTTGTGGGTGGCGACCCCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGCGCTGGGCTGCTCCG‑GGGTGCCGGACGTGGGGGGAAGGATTTTGcgtccgccaaagttgaggggatg                                                                                                                                                                                                           >  1:90402/1‑217 (MQ=255)
                                    aaaaaaaTAGGGAGTGGGGTTTGACAGAGAATATGCTGCTGGCGTTTCATCCATTAATGGGGACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCAAACATTATGGGCGTTGTGGGGGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTc                                                                                                                                                                                                             <  1:911845/237‑1 (MQ=255)
                                    aaaaaaaTAGGGAGGGGAGTCTGACGCAGAATAAGCTGGTGGCTTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTc                                                                                                                                                                                                             <  2:452205/237‑1 (MQ=255)
                                                         tGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTTTGCTGACCGCAAGTTTGATGGt                                                                                                                                                                                                              >  2:1155978/1‑215 (MQ=255)
                                                         tGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGt                                                                                                                                                                                                              <  1:1155978/215‑1 (MQ=255)
                                                         tGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGTTGGTCATGTTAAGCGCACGGCGAACCg                                                                                                                                                                                       >  2:231179/1‑238 (MQ=255)
                                                         tGACGCAGAATAAGCTGCTGGCGTTTCATCGATTAATGCGTACGGATAAGCCAATTGGCGCGTTGC‑TGCTTCTCTGGCCAACATTATGGGCGTTGTGGGTTGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGa                                                                                                                                                                                      <  2:323565/239‑1 (MQ=255)
                                                          gACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCCGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGGTGAGGCC‑CGCGGCCTGGGGCGGGGGGATTGCTTTTGCTTACCCCAGGTTTGGTGGGCACGTTTAgggacgggggacacac                                                                                                                                                                                      >  1:9607/1‑223 (MQ=255)
                                                          gACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGAc                                                                                                                                                                                     <  2:102024/239‑1 (MQ=255)
                                                          gACGCAAAATGAGCCTGTGGTGTTTTCTCGGTTAAGGCCTTACGATAAGCCAAGTTGCGCGTTACGGGTTGCT‑TGGCCAACCTTGGTGGCGTTGTGGGTGGCGACCCCGGGCTGTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGAc                                                                                                                                                                                     <  1:1095467/239‑1 (MQ=255)
                                                          gACCCAGAATATGCTTCTGGGGTTTCAGCGCTTAAGGAGTACGGATAAGCCAAGTGGCTCGTTAC‑TGCTGCTCTGGCCAAACTTATGGGCGTTGGGGGTGGAGACCCCGGGCGTTCCCCAGCTCGGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGAc                                                                                                                                                                                     <  1:972071/239‑1 (MQ=255)
                                                            cGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGTGAGGGGAATGTTTATGCTGACCGCAAGTTTGATGGTCATGTTAAGGCGACGGCGAACCGAcc                                                                                                                                                                                    >  2:87244/1‑238 (MQ=255)
                                                                 aaTAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGGATGATTTTGCTGACCGCAAGTTTGAGGGTCCTGTTAATCGCACGGCGCACCGACCACTTc                                                                                                                                                                               >  2:1307703/1‑238 (MQ=255)
                                                                 aaTAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGACAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGGTGTGTGGTGAATGCTTATGCTGGCCGCAAGTTTGATGGTCACGTTAAGAGCACGGCCAACCGAcccattc                                                                                                                                                                               >  2:1285625/1‑233 (MQ=255)
                                                                  aTAAGCTGTTGGCGTTTCACCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTcc                                                                                                                                                                              <  2:873858/238‑1 (MQ=255)
                                                                         gctgGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAgcggcg                                                                                                                                                                      <  2:1095793/239‑1 (MQ=255)
                                                                         gctgGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTAGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTGTGTCGCGGGGGTCTGGATGCTGCG‑CGCTGCCGGATGTGGGGTGGATTATTCTGCTGACCGCCTGTTTGATGGTCCTTTTGAGCGCCCCGTGCAACGACCACCTCCCAaccgcg                                                                                                                                                                      >  1:837660/1‑239 (MQ=255)
                                                                           tgGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGa                                                                                                                                                                                                                  >  2:501836/1‑193 (MQ=255)
                                                                           tgGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGAGGTGTGGGGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGGGCACGGCGAACCGACCCCTTCCCAGCGGcgcg                                                                                                                                                                    >  2:506936/1‑239 (MQ=255)
                                                                           tgGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGCTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGa                                                                                                                                                                                                                  <  1:501836/193‑1 (MQ=255)
                                                                           tgGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGGGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGTGGCTGGCCGATGCG‑CGCCGCCGGCGGTGTGGTGAATGTTTTTGCTGACCCAACGTTTGATGGGCGTGTTAAGCGCACGGCGAACCGCCCCCTTCCCAgggggggg                                                                                                                                                                    >  1:1265845/1‑235 (MQ=255)
                                                                            ggCGTTTCATCGCTTAAGGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGcgcg                                                                                                                                                                    <  2:677244/238‑1 (MQ=255)
                                                                                 ttCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAAc                                                                                                                                                               <  2:1312044/238‑1 (MQ=255)
                                                                                                 tccGGATAAGCCGATTGGCGGGTTAC‑TGCTTCTCGTGCAAACATTTGGGGTGTTGGGGGTGGCGACGACGGGCGTTCCCCAGCTCGGGTTCCGGTCGGTTTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGgcgcgcg                                                                                                                                              <  1:797796/237‑1 (MQ=255)
                                                                                                  accgtaaggcgaaTTGGCGCGTTCT‑GGCTGCTCTGGCCAACATTAGGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGgcgcgcgc                                                                                                                                             <  2:637159/228‑1 (MQ=255)
                                                                                                  aCGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGgcgcgcgc                                                                                                                                             <  2:95364/239‑1 (MQ=255)
                                                                                                  aCGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGGTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACCGCGAAAGAggggggccc                                                                                                                                             >  2:780424/1‑232 (MQ=255)
                                                                                                       tAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGGGTGGTGAATGTTTATGCTGACCGCCAGTTTTGTGGTCATGTTAAGCGCACGGGGAACCAGCCACTTCCCCGCGGCGCGGGAAACAAGAAA‑AGgggcgcccgccagg                                                                                                                                       >  1:1244061/1‑235 (MQ=255)
                                                                                                           ccAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGGTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTAATGTTAAGCGCACGGCGAACCGACCACTTCCCACCGGCGCGGGAACAGATAAAGAGGCGCGCGGCCTGTTTGt                                                                                                                                    >  2:745785/1‑239 (MQ=255)
                                                                                                            cctttGCCGCTTTTC‑TGCTGCTCTGGCCAACTGTTTGTGCGTGGTGGTGTGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGt                                                                                                                                    <  1:506936/235‑1 (MQ=255)
                                                                                                            catctGGGGCGTTAC‑GTGTGCTCTGGCCCACATTTTGGGCGTGGTGGGGGGGCACTCCGGGCGTGCCCCAGCTCGGGATCCTGGGGGTGTGTGTCGCGGGTGGCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGt                                                                                                                                    <  1:493467/234‑1 (MQ=255)
                                                                                                               ttGGCGCGTTCA‑GGCTTCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTg                                                                                                                                <  2:813420/239‑1 (MQ=255)
                                                                                                               tgggCGCGTTAC‑TGCTGCGCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTg                                                                                                                                <  2:264117/237‑1 (MQ=255)
                                                                                                                ttggggcgtttagggtgctTTGGCAAACATTTGGGGCGTTGGGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTg                                                                                                                                <  1:1044002/224‑1 (MQ=255)
                                                                                                                tGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGGGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGCTGCG‑CGCTGCCGGGTGGGTGGTGGGTGCTTATGCTTGTCGCAAGTTTGCGGGCTCTTTTAAGCGCACGGTGGACCGGCCACTTCCCAGCTGCGTGGGAACAGAGAGAAAgggaggggggcggttgtgttggg                                                                                                                               >  1:494498/1‑218 (MQ=255)
                                                                                                                 tggcggtttacctgtgctGTGGAAAATATTATGGGGTTTGGGGGGGGCGGCATCGGGCGTTCCCCAGCTCGTTATCCTGGCGGTGTTTGCCGCGGGTGTCTGGCTGGTGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGc                                                                                                                               <  1:1192846/225‑1 (MQ=255)
                                                                                                                          c‑tgctgCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGAt                                                                                                                    <  2:1035859/239‑1 (MQ=255)
                                                                                                                           ttctctctttGGCTAACTTTTGGGGGGGTGGGGGGGGGGGCACCGGGGTTTCCCGAGCTCTGGTCCGTGGGGGGGGTTGTGGCGGGTGTCTGGCTGATGCG‑CGCCGCCGGATGTGTGGTGAATGATTATGCTGACCGAAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGAt                                                                                                                    <  1:695565/230‑1 (MQ=255)
                                                                                                                           cgtgttcggtGGCCAAAGTTAGGGGGGTTGTGGGGGGTGACAGCGGGTGTTCCCCTGGTCGGGTATCGGGCGGTGTGTGTCGGGGGTGTCTGGTTGATGCG‑GTGTGCCGGATGTGTGGTGAAGGATTATGCTGCCCGCAAGTTTTATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTGTGTCGTGCT‑GGTACTGAt                                                                                                                    <  1:359473/230‑1 (MQ=255)
                                                                                                                           cggcgggtctGGCCAATATTGTTTGGGGTGGGGGTGGCGGCCCCGGGCGTGCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGGGGGTGTCTGGCTTGTGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCTAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGAt                                                                                                                    <  1:231179/232‑1 (MQ=255)
                                                                                                                                 ctctGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGGTTTCGtt                                                                                                              >  2:1012345/1‑239 (MQ=255)
                                                                                                                                   gtGGCCAACATTATGGGCGTTGTGAGTGGCGACACCGTGCGTTCCCCAGCTGTGGCTCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGTTGTATGGGTATGCGGACCGCAAGTCTGAAGGTACTGTTAAGCGCCCGGGAAACCGACAACTTCCCAGAGGTGCGGTCAACGCGGAAGAGGCCCGCCCGCCGCTTGCCGTGGT‑GGGCAGGATTTCGtttt                                                                                                            >  1:817767/2‑239 (MQ=255)
                                                                                                                                      gCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGGGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGTGGATTGATTATGCTGACCGCAAGTTTGTTGGGCAGGTTATGGCCACGGGGAACCGCCCACTTCCCAGCGGCGCGGTACCACAAAAAAGGGGGCGCGCGCTGTTTGTCGGCGT‑GGGACGGATTTCGTTTTTat                                                                                                         >  1:35506/1‑238 (MQ=255)
                                                                                                                                           cATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGGCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGCGGCGCGCGCGCCGTTTGTCGTGCT‑GGTACTGATTTCGGTTTTACTgggg                                                                                                    >  2:1311876/1‑237 (MQ=255)
                                                                                                                                              tATGGGGGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTg                                                                                                 <  2:501455/239‑1 (MQ=255)
                                                                                                                                                tGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGGCGTTGGGTGAATGATTATGTTGACCGCCAGTTTGCTGGTCATGTTAAGCGCACGGCGCACCGACCCCTTCCCACCGGCCCGGTAAAAGAGGAAAGGGCGCGCGCGCTTTTTTTCGTGCG‑GGGCGTTTTTTGGTTTTTAGCGGTGCTgcg                                                                                               >  1:1142647/1‑237 (MQ=255)
                                                                                                                                                    cGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCt                                                                                            <  2:1304404/238‑1 (MQ=255)
                                                                                                                                                     gTTGTGGGTGGCGACACCGGGCGGTCCCCAGCTCTGGATCCTGGCGGTGTTTGGCGCGGGTGTCTGGCTGATGCG‑CGGTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTg                                                                                           <  2:153463/238‑1 (MQ=255)
                                                                                                                                                      ttGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGAGGGGTGGTGAATGATTATGCTGACCGCAAGTTTGTTGGTCATGTTAAGGGCACGGCGAACCGACCACTTCCCAGCGGTGCGGGAACGGAGAAAGAGGCGCGCGCGCCGGTTGT‑GCGCTCGGAACTGATATCGTTTTTACGGGGGCGGACggggaa                                                                                         >  1:501455/1‑234 (MQ=255)
                                                                                                                                                        gtgggtggCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGGGTCTGGCTGATGCG‑CGCTGCCGGATGGGTGGGGGATGATTATGCTGACCGCAAGTTTGATGGTCATGGTAAGCGCACGGCGAACCGACCACTTCCCACGGGGCCGGTAACAAGGGAACGGCCGCGCGCGCCGGTTTGCGTGCG‑GGGACTGATTTCGTTTTTTCTggggggtggggtggaaa                                                                                       >  1:1160159/1‑224 (MQ=255)
                                                                                                                                                                     ccGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATAGGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGGAACAGGGGAAAAGGCGCGCGCGCTGTTTTTCGGTGT‑GGGCCGGGTTTGTTTTTTACCGGTGATGGCCCCGAATACGAGGACCAtttt                                                                          >  1:502661/1‑237 (MQ=255)
                                                                                                                                                                                      ttGGGTCCTGGGGGGTTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGGCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGGCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCgcgc                                                         <  2:1230458/238‑1 (MQ=255)
                                                                                                                                                                                         gATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGGTGACCATTCTGTTGTCGATTGCCgcgcca                                                       >  2:291330/1‑236 (MQ=255)
                                                                                                                                                                                         gATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGGGCT‑GGTACTGATTTCGATTTTACTGGTGCTGACCCTGAATACGATGGCCTTTCTGTTGTCGCTTGCCGCGCTa                                                       >  2:951391/1‑238 (MQ=255)
                                                                                                                                                                                            tcTGGCGGTGGTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAgcg                                                    <  2:477085/237‑1 (MQ=255)
                                                                                                                                                                                              tGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGGTAACCGACCCCTTCCCAGGGGCGCGGAGACAGAGAAAGAGTCCCCGGCGCCGGTTTTTGTGCT‑GGTGCTGTTTTCGTTTTTTCTGGTGCGGATCGTGATTACGCTGACCATTTTGTTGTCTATTgacccgtcggggtgg                                                 >  1:1125087/1‑225 (MQ=255)
                                                                                                                                                                                              tGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAgcggcg                                                                                                                                                                      >  1:1314416/1‑123 (MQ=255)
                                                                                                                                                                                              tGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAgcggcg                                                                                                                                                                      <  2:1314416/123‑1 (MQ=255)
                                                                                                                                                                                              tGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTTTCGTGCT‑GGGACTGATTTCGTTTTTATTGGTGCTGACGCTGAATACAGAGAACCTTCTGTTGTCAGTTGCCgcgcgtggggtg                                                 >  1:491820/1‑231 (MQ=255)
                                                                                                                                                                                                ggtgttttttttcggggTTTCTGGGTGAGGCG‑CGCGGCCGGGTGTGGGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGAACGGCGAACCGACCCCCTCCGAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGc                                               <  1:951391/225‑1 (MQ=255)
                                                                                                                                                                                                 cGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGc                                               <  2:638064/238‑1 (MQ=255)
                                                                                                                                                                                                    tgtTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTg                                            <  2:212480/238‑1 (MQ=255)
                                                                                                                                                                                                      tttGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCCCTGGCGTgggg                                         >  2:413176/1‑238 (MQ=255)
                                                                                                                                                                                                       ttGTCGGGGGTGTTTGGCTGGTGCG‑CGCTGCCGGGTGGGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGGTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGgtg                                        <  1:413176/239‑1 (MQ=255)
                                                                                                                                                                                                         gTCGCGGGTGTCTGGCTGATGCT‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGAGGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTa                                      <  2:90402/239‑1 (MQ=255)
                                                                                                                                                                                                            gcgGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTAcc                                    <  2:954373/238‑1 (MQ=255)
                                                                                                                                                                                                                gtgtCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGAGGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCCATCCCGTTTTGTCGCGCT‑GGGCCTGATTTCGTTTTTAGTGGGGCTGGAGCTAAATACTAGGACCATTCTTTTTGTGGTTGCGGCGCTAGCGCTAGCCGGGGGGGACCCCttt                               >  1:668455/1‑239 (MQ=255)
                                                                                                                                                                                                                   ttggggttgtggg‑cgcTGGGGGATTTTGGGGGAATTATTATGCTGACCTCAAGTTTGATGGTCATGTTAAGCGCACGGCGACCCGACCACTTCCCAGCGGCGCGGTAAAAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATg                            <  1:447360/227‑1 (MQ=255)
                                                                                                                                                                                                                   gcTGGCTTCTGCG‑CGGTGCCGGATGTGTGGTGAATGATTATGCTGCCCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATg                            <  2:1225854/238‑1 (MQ=255)
                                                                                                                                                                                                                    tgggggggtgcg‑gggtgcggggTGGGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCAGGTTAAGCGGACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATg                            <  1:1304577/230‑1 (MQ=255)
                                                                                                                                                                                                                      ggCTTATGCG‑CGCTTCCGGATGTTTGGTGAATGATTAGGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCACTCTGTTGTTGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAg                         <  2:412289/239‑1 (MQ=255)
                                                                                                                                                                                                                      ggCTGATGCG‑CGCTGCCGGATGTGGGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAg                         <  2:110404/239‑1 (MQ=255)
                                                                                                                                                                                                                       gggtgattcgtgttggctgATGTGTGGGGAAGTATTATGCGGACCGCAAATTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGGGCGGTAGCAGAGAAAGAGGCGCGCCCGCTGTTTGTCGTGCT‑GGTTCTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGATCATTCTGTTGTCTATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAg                         <  1:890683/221‑1 (MQ=255)
                                                                                                                                                                                                                           aTGCC‑CGCTGGCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGta                    <  2:1265845/239‑1 (MQ=255)
                                                                                                                                                                                                                            tGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGCATACGAGGACCATTCTGTTGCGGATTGCCGCCCCAGCGCGGGGGGGGGTGTACCCGTTTTTGAAGGGGgat                   >  1:915372/1‑239 (MQ=255)
                                                                                                                                                                                                                            tGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGAACGGCGAACCGACCACTTTCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGta                    <  2:1270213/238‑1 (MQ=255)
                                                                                                                                                                                                                              gggggggggcgattgtgtgGTGAATGATTTTCCCGCACGCAAGTTGGAAGGGCATTTTAAGGGCCAGGGGACCCGCCCTCTTGCCAGGGGGGCGGTAACGGAGAAAAAGGCGCGCGGGTTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGtata                  <  1:1285625/226‑1 (MQ=255)
                                                                                                                                                                                                                                      ccGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGGGCTGACGCTGAATACGATGACCATTCTGTTGTCGTTTGCCGCGCTAGCGCTGGCGGGGGGGGCCCCGTTTATTAAGGGGTATACCCATca           >  1:71063/1‑237 (MQ=255)
                                                                                                                                                                                                                                        ggATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGTATACCCATCTAcc        <  2:235677/239‑1 (MQ=255)
                                                                                                                                                                                                                                        ggATGTGGTGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGTATACCCATCTAcc        <  2:491820/239‑1 (MQ=255)
                                                                                                                                                                                                                                              gtggtgAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCGGAATACGATGACCTTTCTGTTTTCTCTGGCGGCGCTCGCGCTGGCGTGGGGGTACACGTTTAGGAAGGGTTTTACCCATTTACGCCAAgt  >  1:1070243/1‑239 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                              
AACTGTTTTTACCGGCGTCACCGTTGTACTAAGAGGAAAAAAATATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTAC‑TGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCG‑CGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCT‑GGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGTATACCCATCTACCGCAAGT  >  NC_000913/4252971‑4253445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A