Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
695,546 |
A→G |
12.8% |
E149G (GAG→GGG) |
ubiF → |
2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 695,546 | 0 | A | G | 12.8%
| 257.7
/ 2.6
| 106 | E149G (GAG→GGG) | ubiF | 2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase |
| Reads supporting (aligned to +/- strand): ref base A (41/49); new base G (12/4); total (53/53) |
| Fisher's exact test for biased strand distribution p-value = 5.50e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 115 total aligned reads displayed.
AGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGGTGTG > NC_000913/695313‑695780
|
aGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTCCGCGGCATCGCCATGTTGGTCTTCAGgggctggggctgt > 1:5375/1‑238 (MQ=255)
aCAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGaa < 1:676761/237‑1 (MQ=255)
cAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGGGCTGAACgg > 1:449060/1‑239 (MQ=255)
ggttttGCGTTGCCATCCTTTCCGTGGACTGGAAACGGGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCg < 2:474619/234‑1 (MQ=255)
gCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGGGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCCTGATGATCTTCAGGAGCTGGAGCTGTAAGGCGGGGAAg > 1:163038/1‑239 (MQ=255)
gCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCCCGCTGATTGCGCTGCATCGCCGTGATGACCCTCCGGAGCTGGGCCTGAAAGGCGGGGAAg > 1:57040/1‑239 (MQ=255)
gCCATCCTTACCGCAGACTGGACACGTGGGAGTGGGAACCGGCGCATGTGGTGTTTGACGCCGCTGACCTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACCCTGTCCTGCAACAGGCGTTGTGGCAGGCCCGGGAAGGGCATCCGGAATGAACGTTCACG‑GTGCCAGGCTCGCTGGTTGGGCGGCATCGCCACGCTGATCTTACGGGGCTGGGGTGGAAAGGCGGGGagggggt > 2:190572/1‑232 (MQ=255)
gCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGGTCGCTGATTGCGCTGCATCGCCATGATGATATTCAGGAGCTGGGGCTGGAAGGCGGGGAAGGGAt > 1:586592/1‑238 (MQ=255)
gCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCGGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGAt > 1:472845/1‑238 (MQ=255)
gCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGGTGGCCCAGCCCGCTGGTTCGGCTCCAACCCGATGTTACTCATTCGGAGCTGGGGCTGAAAAGTGGGGAAGGGagt > 2:429810/1‑237 (MQ=255)
tCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGGGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTcgcg < 1:501670/239‑1 (MQ=255)
cTTACCGCAGGCTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTcgcgcg < 1:880137/239‑1 (MQ=255)
cTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGGGGCAGGGGCTGGCAGCGACTCGGAAAGGAACGTT‑ACGGTGGCCCGGCGCGCTGATGGCGCTGCGTCGCCAGTGTGATTTTCCAGGGCTGGGGCTGGAAGGGGGGGGAGAGAtttgaggg > 2:818321/1‑233 (MQ=255)
cAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGGTTGCGCGGCATCGCCATGATTATCTTCAGGAGCCGGAGCGGAAAGGCGGGGAAGTGATTtgcggcgagcggg > 2:907814/1‑230 (MQ=255)
aCTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGaa < 2:1070708/207‑1 (MQ=255)
aCTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGaa > 1:1070708/1‑207 (MQ=255)
cTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGAt < 1:716920/239‑1 (MQ=255)
ggagtgggaAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGGGATTCCCGCGAAGCTGGGGATTGGGGCCGACg > 1:381519/1‑239 (MQ=255)
ggCGCGTGTGGTGTGTGACGCCGGTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCCACAGGCGTTGTGGCGGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGc < 1:461232/239‑1 (MQ=255)
cgcATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGGGCTGGAAGGCGGGGAAGTGATTGGGGCGAAGCTGGGGATTGTGGCCGCCGGCGCAAATTccagg > 1:528985/1‑235 (MQ=255)
cgcATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGGGAAGGGATTCGCCCGAAGCTGGGGATTGGTGCCGACGGGGCAAATTCGCAg > 1:621606/1‑239 (MQ=255)
gtTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCCCGCCGATTGCGCTGCCTCGCCATGATGATCTTCAGGGGCTGGGGGTGAAAGACGGTGGCATGATTTGCGCGAAGCCGGTGATGTGTGCCGCAGGGGCCAATTTCCAGGGGCggggaa > 2:1030835/1‑235 (MQ=255)
tGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGACGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCGGCATCGCCATGATGATCTTCAGGGGCGGGACCTGAGAGGGGGTGGAGGGTGTAGCGCGAACCTGGGGGTTGGGGCCGAAGGCGCAAAATccacggtgggagaggtgg > 2:104329/1‑222 (MQ=255)
tAAGCTGCCGTTGCTGGGCTTTTTGGTGGAAAACCCTTTCCTGCAACAGGCGTTGGGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGGGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTGCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGt < 2:163038/237‑1 (MQ=255)
aCCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGGGCTGAAAGGCGGTGAAGTGGTTCGCGCGAAGCTGGGGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTcatgcat > 1:52336/1‑239 (MQ=255)
ccgcgtttttgctttttggtggAAAACCCTGTCGTGCCACAGGGGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGGTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTcatgcatg < 2:926587/223‑1 (MQ=255)
cGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGGGAAGGGATTCGCGCGAAGCTGGGGATTGGTGCCGACGGCGCAAATTCGCAGGTTCGGCCAGTGGCGGGAGTTGGCGTTcatgcatg > 1:1027723/1‑238 (MQ=255)
cGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGGGCCCGGCTCGCCGATTGCGCGGCCTCCCCATGATGTTCTTCCGGAGCCGGGGGTGGAAGGCGGGTAGGTGGTTTGCGCCAGGCCGGGGGCTGGGGCCGGAGGGCCCAATTTGCAGGGGGGGCAGAGgggggggagttgggtcttcgacagg > 2:566361/1‑220 (MQ=255)
ctTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGGTTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGGGAAGTGATTCGCGCGAAGCTGGGGTTTGGGGCCGACGGCGCCAATTGCCAGGTGCGGCAGCGGGGGGGGATTGGGGttttcgcaatgcgaga > 2:174958/1‑225 (MQ=255)
ggtttttgggggAAAACCCTTTCCTGCAAAAGGGGTTGGGGCAGGCGCGGGAAGGGCATCCGAAAGTAACGTT‑ACGTGTGGCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGAGTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATgcg < 2:417641/233‑1 (MQ=255)
gcttaagggtggGAAACCCGGTCCTGCAACAGGCGTTGGGGCAGGCGGTGGAAGCGCATCCGAAAGGAACGTT‑ACGTGGGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATgcg < 1:128119/232‑1 (MQ=255)
gCTAAAGGGGGGAAAACACTGGCCTGCCACGGGCGTTGTGGCAGGCGTTTGAAGGACATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATgcg < 1:429810/239‑1 (MQ=255)
ctttgtggtggAAAACCCTGTCCTGTAACAGGCGTTGTGGCAGGCGGTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATgcg < 2:498947/233‑1 (MQ=255)
ctttgtgggggAAAACACTGCCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGGGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATgcg < 2:5375/233‑1 (MQ=255)
tatGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCTACGGCGCAAATTCGCAGGGGGGGCAGATGGCGGGGCTTGGCGTTCCTGCATGGCAGTATGCGCAGt > 1:1032957/1‑239 (MQ=255)
tatGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGGGATTGGGGCCGACGGCGCAAATTGCCCGGGGCGGCAGATGGGGGGAATTGGCGGTCATGCATGGcgggaggggcatc > 1:956644/1‑227 (MQ=255)
tatGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGAAGCTGGGGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGGGGCAGATGGCGGGGATTGGGGTTCATGCATGGCCGTGTgcgcgat > 1:1038468/1‑236 (MQ=255)
ggtggAAACCCCTCTCCTGCAACAGGGGTTGTGGCGGGCGCGGGAAGCGCAGCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATGGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGt < 2:732389/239‑1 (MQ=255)
tggAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTcgcgcg < 1:501774/149‑1 (MQ=255)
tggAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGGGc > 1:876054/1‑239 (MQ=255)
aacccttGTCCTGCAAAAGGGGTTGGGGGAGGCGGTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATg < 2:381519/232‑1 (MQ=255)
aaccgtggccTGCACCGGGCGTTGTGGCAGGCGCGGGAAGGGCCTTCGAAAGTAACGGT‑ACGGGTGCCAGGCTCGCTGAGTGCGCTGCATCGCCATGATGATCTGCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGtt < 2:1027723/231‑1 (MQ=255)
aaCACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGGGCGGCGGATGGCGGGAATTGGCGTTCATGCCTGGAGGGATGCGCAGGCGTGCATGtt > 1:733624/1‑239 (MQ=255)
tGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCgg < 2:741342/123‑1 (MQ=255)
tGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGAATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTc < 1:785588/239‑1 (MQ=255)
tGCAAAAGGCTTTGGGGGAGGCGCTGGAATCGCATCAGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATGGGCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTc < 2:618077/239‑1 (MQ=255)
ggCAACAGGCGTTGTGGCAGGCCCTGGAAGCGCATCCGAAAGTAACGTT‑GCGTGGGCCCGGCTCGCGGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTc < 1:818321/238‑1 (MQ=255)
cgCAACAGGCGTTGGGGACGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTc < 1:381813/238‑1 (MQ=255)
cAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGCAAGGCGGGGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAAGT‑GCCGGTGCGGCAGATGGGGGGGATTGGGGTTCCTGGCTGGCAGGATGCGGCGTCGGGGAGGTTGTTTAGCGGccgg > 2:355466/1‑237 (MQ=255)
cAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCCTGCATGGCAGTATGCGCAGTCGTGCATGGTGATTAGCGTCCa > 1:109732/1‑239 (MQ=255)
cAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCa < 2:528067/206‑1 (MQ=255)
gTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCCTCGCCATAAGGATCTTCAGGAGCTGGAGCTGACAGGCGGTGAAGTGCTTCGCGCGAAGCTGGGGATTGGTGCCGCAGGCGCAAATTCGCCGGGTGGGGAGGTGGCGGGGATTGGCGTTCATGCATGGCCGGATGGCCAGACGGGGATGTTGGTTACGGTCCaagggggag > 2:697980/1‑231 (MQ=255)
tgtgGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGaa < 1:757606/238‑1 (MQ=255)
tgtgGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGGGAAGTGATTCGCCCGAAGCTGGGGATTGGGGCCCACGGCGCAAATTTCCAGGTGCGGCAGGTGGCGGGGATTGGGGGTCATTCATGGCAGAATGCGCAGTGGGGCATGTTGATTAGGGTCCCGGGCGGGaaa > 2:546602/1‑238 (MQ=255)
ggCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCCGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCAGGTTGATTAGCGTCCAGTGCGGGAACGATCCCg > 1:7840/1‑239 (MQ=255)
tGGAAGCGCCTCCAAAAGTAACGTT‑GCTGGGGCCAGGCCCGCGGATTGCGCTGGTTCGCCATGATGATCTTTAGGAGCTGGAGCTTAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGGTCCCGGCGa < 2:834129/238‑1 (MQ=255)
gcATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGGGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCGGATGGCGGGAATTGGCGTTCATGCATGGGAGGATGCGCGGGCGGGCAGGTTTGTGCGGGTCCAGGGCGGGAACGTTCCCgggcccgccc > 2:722608/1‑228 (MQ=255)
cATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGCCGGCGCAAATTCGCAGGGGCGGCAGATGGCGGGAATTGGCGTTCATGCCTGGCCGTATGGGCGGGCGGGCATGGTGATTTGGGTCCAGGGCGGGAACGACCCCGCCGCCAGCAccgg > 2:1028050/1‑237 (MQ=255)
cATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGGCGGGCATGGTGATTCAGGTCCAGTGCGGGAAAGATCCCGGCGAAAGAAccag > 2:297201/1‑237 (MQ=255)
cATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGGGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATAAGGGTCCAGTGCGGGAACGATCCCGGCGACAGCACCTg > 1:890036/1‑239 (MQ=255)
ctCCGAAAGTAACGTT‑TCGTGTGGCCGGCTCGGTGATTGGCGTGCATTGCCATGGTGGACGTCGGGAGGTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGGTTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTgg < 2:449060/238‑1 (MQ=255)
aTCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTgg < 1:174958/239‑1 (MQ=255)
tCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCCCCTGgc > 1:965445/1‑239 (MQ=255)
ccGAAAGTAAGGTT‑TCGGGTGGCCGGCGTGTGGATTGCGCTGGATCGCCAGGATGATCTTCAGGGGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCGGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGgca < 2:57040/239‑1 (MQ=255)
attAACTTT‑TCGGGGGCCCGGCTCGCGGATTGCGGTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGGGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAAt < 2:876054/237‑1 (MQ=255)
aGTGACGTT‑ACGTGGGCCAGGCTCGTTGATGGCGCTGCACCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAAt < 1:7044/239‑1 (MQ=255)
cGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGAt < 1:106838/82‑1 (MQ=255)
cGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGGCGTGCCTGTTGATTAGCGGCCAGTGCGCGACCAGTCCCGGCGACGGCACCGGGCAGCAATTTAc > 1:138452/1‑238 (MQ=255)
aCGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGGGATTCGCGCGAAGCTGGGGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGGGTTCTTGCATGGCAGTTTGCGAAGTCGTGCTTGTTGATTAGAGTCCAGTGCGGGAACGATCCCGGCGCCAGCCCCTggaggaaattaatcccgg > 2:699352/1‑223 (MQ=255)
cGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCcgg > 1:763900/1‑238 (MQ=255)
cGTGGGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCcgga < 1:797117/239‑1 (MQ=255)
gCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGGGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGGGCGAGAACGATCCCGGGGCCAGCACCTGGCCGCAATTTAATCcggacgga > 1:431556/1‑238 (MQ=255)
ccggCTCGCTTGTTGCGCTGCATCGCCATGATGGTCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGGTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGAcc < 2:763900/236‑1 (MQ=255)
gtggcgctcgttgctcatcggcGCCATGATGAGCTTTAGGGTCTGGAGCTTGAAGTCGGGAAAGTGATTCGCGCAATGTTGGGGATTGGGGACGACGCCGCAAATTCGCAGGTGCGGCAGTTGGTGGGAATTGGCGTTCGTGCATGGCAGTATGCGCAGTCGTGCATAATGATTAGCGCTCGGTGCGAGCACGATCCCGGCGACAGACACTGGCAGCAATTTACTCCGGAAGGAAcgtg < 2:730588/218‑3 (MQ=255)
gCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGGGCAGTCTGGCATGTTGATTAGCGTCCAGGGCGGGAACAGTCCCGGCGGCAGCCCCTGGCAGAAATTTACTCcggcggggcccgggcggg > 2:63049/1‑224 (MQ=255)
gCTGATTGCGCTGCATCGCCATGATGAGCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCt < 1:453755/206‑1 (MQ=255)
cTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGGTGAAAGGCGGTGAAGTGATTCGCGGTAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCgcgtgcgt < 1:1028050/238‑1 (MQ=255)
cggttcATCGCCTTGATGTTCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGGGATTCGCGAGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCg < 2:52336/234‑1 (MQ=255)
gcTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCgt < 1:907814/239‑1 (MQ=255)
gcgtcaggttggtataaggggagggagcgggggctGAAAGGGGGTGAAGGGGTTCGCGGGAAGCTGGTGATTGGTGCCGACGGCGCAAAGTCGGAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCgt < 2:514182/215‑1 (MQ=255)
cTGCATCGCCATGATGATGTTCAGGAGCTGGAGCTGAAAGGCGGTTAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCgt < 1:758233/238‑1 (MQ=255)
cTGCATCGCCATGATGAACTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGAGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCgt < 1:520582/238‑1 (MQ=255)
tGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATT‑GCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCgttg < 1:355466/238‑1 (MQ=255)
aTCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGGCAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGGTTTTGCCGTTGttt > 1:852874/1‑239 (MQ=255)
cGCCCTGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGa < 1:546602/239‑1 (MQ=255)
caggaggatCTTCAGGAGGTGGAGGTGAAAGGGGGTTAAGTGATTCGGGGGAAGCTGGTGATTGGTGCCGGCGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATaa < 1:566361/233‑1 (MQ=255)
cATGGTGGTCTTCAGGGGTTGGGGCTGGAAGGGGGGGAAGTGATTCGCGGGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATaa < 2:109732/239‑1 (MQ=255)
atgatCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCCTGGCAGTATGGGCAGTAGGTCCTGTTGATTAGCGTCCAGTGGGGACACGACCCCGGCGACGACGCCCTGGATCAATTTAATCGGGACGGACCCCGGGCGGTTCTGcgcggtgtgaaaaaaggg > 2:573538/1‑222 (MQ=255)
tgcttttCGGGGGCTGGAGCTGAAAGGCGGTGAAGGGATTCGCGCGAAGCTGGTGATTGGGGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTggg < 2:733624/234‑1 (MQ=255)
atCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGCCGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGc > 1:1029127/1‑238 (MQ=255)
ttCAGGAACTGGAGCTGAAAGGCGGTTAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCg < 1:896195/239‑1 (MQ=255)
tgaggaggTGGGGCTGAAAGGCGGTGAAGGGATTCGCGCGAAGCCGGGGATTGGTGCCGACGGCGCAAATGCGCAGGGGCGGGAGATGGCGGGAATTGGCGGTCATGCAGGGCAGGATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCg < 1:293248/236‑1 (MQ=255)
cAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGAAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGCGCACGATCCCGGCCGCAGCCACTGGGCGCAATTTACTCCGGCCGGACCGCGGGGGGTTCTGCCGGTGTTTGAAAACTGGGAATc > 2:284162/1‑236 (MQ=255)
ggagctggagctGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCCgg > 1:189046/1‑239 (MQ=255)
gggtggaggtgAAAGGGGGTGAAGTTGTTCGCGCGAAGCTGGTTATTGGTGCCGACGGCGCAAATTCGGAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGgt < 1:569221/235‑1 (MQ=255)
ggttgagcggAAAGGCGGTGAAGTGTTTCGCGCGAAGCTGGTGATTGGTGCGGACGGTGCAAGTTCGCAGGGGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCATCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGgtg < 2:431556/234‑1 (MQ=255)
gccggagctgAAAGGCGGTTGAGTTATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGgtg < 1:873111/235‑1 (MQ=255)
ctggagctgAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGGGCAGCCGTGCATGTTGATTAGCGTCCAGGGCGAGACCGATCCCGGCGACAGCCCCTGGCAGCAATTTCACCCGGACGGGCCGCGGGGGTTTCTGCCGTTGTTTGTTAACTGGGCATCGCTgggggg > 2:472150/1‑235 (MQ=255)
ctggagctgAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACCGCACCTGGCAGCAATTTACTCCGGACGGACCGCGGGCGTTTCGCCCGTTGTTTGATACCGGGGCATCGCTGGggtg > 1:61785/1‑239 (MQ=255)
ctggagctgAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGGCGGACCGCGTGCGTTTCCGCCGTTGTTTTATAACTGGGCAACGCTgggggg > 2:523604/1‑235 (MQ=255)
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AGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTT‑ACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGGTGTG > NC_000913/695313‑695780
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
