Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,837,435 |
T→G |
23.5% |
V75G (GTG→GGG) |
ynjC → |
putative ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,837,435 | 0 | T | G | 23.5%
| 136.3
/ 4.9
| 90 | V75G (GTG→GGG) | ynjC | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (19/45); new base G (21/5); total (40/50) |
| Fisher's exact test for biased strand distribution p-value = 1.40e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGCGCTGGAACAAGAATGGCTACACCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCA > NC_000913/1837197‑1837667
|
tGCGCTGGAACAAGAATGGCTATACCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGt < 1:606958/239‑1 (MQ=255)
gAAAAAGAATGGCTACCCCTTTCCGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTTATTTAGGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATCTCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATtgtg < 2:360226/239‑1 (MQ=255)
aaaCAAGGATGGCTTAGGCGTTACTGTTCGCATTGCGTGTTTTGCTGTTGGCGGGGGGGGCGGTTATTTATGCCCCGCTGATCCCTGTAGCTGC‑ACCGCGTATGTCGCCTGGTTTGGCGTTGACACACTGGAAGGCGTGATTTGACGATGCACAGTTACCGCAGGCATTACTGTCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATtgtg < 2:1244/238‑1 (MQ=255)
aGAATGGCTACACCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTTCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGGGTCGACAACCATCGCGGC‑GGGCGGGGCCTTGTTGGTTTGCCCGCTGGGGATTTTGgggcg > 1:466880/1‑238 (MQ=255)
ccaccgttgcttctcGCATTAATTTTTTTTGGGTGGGGTGTGGGTGCGGTGATTTATGGCCCCCTGACCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGGCACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTgg < 2:827/225‑1 (MQ=255)
acCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCCTTACTGGCAACGCTGGGGTCGGCAACCATCGCGGC‑GGGCCGGGGATTTTTTATTTGCCCGCTGGGGGTTGTTGGGC‑TGTTGCCCggg > 1:891452/1‑238 (MQ=255)
gtttcGCATTTTTCTTTTTGGTTGGGGCGATGGTGGCGGTGATTTATGCCCCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑Tgg < 2:336399/235‑1 (MQ=255)
cGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCCGCTCT‑CACGCTGATATCCCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCCATCCCCCCTTACCCCAGGCTTTACTGGCAACCCTGGTGTCTACAACCCTCGCCGC‑CGCCGGGGGCTTGTTGGTTGCCCCCCTGGGTGTGTTGTTGC‑CGTGGCCCTGGCCGAAA‑Tgtggcc > 2:50795/1‑234 (MQ=255)
cGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTTCCGCTCCCCCGTTTCCCCAGGCCTTACTGGCCACCCTGGGGTCGCCAACCCTCCCGGC‑GGGCCGGGGACTGTTTTTTGCCCCGCTGGGGGTTTGTGCGC‑TGGGGGCGGGGGCGAAA‑Agggggc > 2:174474/1‑235 (MQ=255)
cGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGCCAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTTTGGCGC‑TGTGGCCCGTGCCGGAA‑TGGCAgg > 1:592588/1‑238 (MQ=255)
cGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCCCGGC‑CGGCGGGGCCTTGTTGATTTCCCTCCTGGGTGTTGTGGCGC‑TGTGGCCCGGGCCGCAA‑TGTCaac > 1:171551/1‑237 (MQ=255)
cATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACCCTGGCAGGCGTTATTTGCCGATCCCCAGTTACCCCAGGCATTACTGGCAACGCTGGTGTCGGCAACCATCGCGGC‑GGGCGGGGGGTTGTTGTTTTCCCCCCTGGGGTGTGTGGGGCGCGGGGCCGGGGCGGAAA‑ggggcggg > 2:934592/1‑234 (MQ=255)
cATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGGTACCGCAGGCATTACTGGCCACGCTCGGGTCGACCACCATCGCGGC‑GGGCGGGGCCATGTTTGTTGGCCTGCCGGGGATTCTGTGCC‑CGTGGCCTGGGCCCGAA‑AGGCAGCG‑t > 2:180309/1‑239 (MQ=255)
gATGGTGGCGGTGATTTATGCCCCGCTGATCCCGGCAGCTCT‑CACGTTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTgg < 1:1011425/238‑1 (MQ=255)
tgttgcgcgtttttATTCGCCGCTGATCCCGGCCG‑TCTCCCCTCTGATATCCCCTTCTTTGGCGTTGCCCTACTGGCAGGCGTTATTTGCCGACCCCCAGTTACCGGAGGCATTACTGGCCACGCTGGTTCCGACAACCATCGCGGC‑GGTCGGGGCATTGTTTATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGgctg‑c < 2:208889/228‑1 (MQ=255)
gggtgtttttgtccccGCTGTTCCCGGCAGCCTT‑CCCGGTGATATCGCCTGTTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑c < 2:59153/224‑1 (MQ=255)
cGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCCTTGTTTATTTCCCCTCTGGGGATTTTGGGGG‑CGTGGCCTGGGCCGAAA‑TGGCGACG‑TTTGTGC‑GCCCGCC‑GCCCCGGGCTC‑CTCC‑CCC‑TT‑CCCCacggggtg > 2:1050022/1‑232 (MQ=255)
cGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCCTGTGGC‑t > 1:699863/1‑239 (MQ=255)
cGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCACCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑TTCG‑CCA‑TT‑CCCCaatgggct > 1:838423/1‑232 (MQ=255)
cGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTTTGGCGC‑GGTGGCCCGGGCCGGAA‑ATGCAGCGCTTGGTGC‑CCCCG‑C‑TGCCCGGGCCG‑CCCG‑CCC‑TT‑ccccccgggggt > 2:1004540/1‑231 (MQ=255)
cGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCCGGGCCTTTTTGTTTGCCCTTGTGGGGAATGTGGCGC‑GGTGGCCTGGGGCGGAA‑TGGGAGGC‑TATTTGG‑GCCCCTC‑TGCCCGGGGTG‑CTCG‑GCACTT‑CCCCATggggt > 2:241125/1‑238 (MQ=255)
cTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGCCAACCATCGCGGC‑GGTCGGGGCCTTGTTGATTGCCCTCCTGGGGATTTTGGCGC‑TGTGGCCCTGGCCGAAAGTGACACGG‑TAT‑TGG‑CCCCCCC‑CGCCCGGGCGG‑CCCC‑CCA‑TT‑TCCCACGTGGC‑ttt > 2:787401/1‑239 (MQ=255)
cTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTTGTGATTGCCCTGCTGGGGATTTTGGCGC‑CGTGGGCTGGGCCGGAA‑TGGCAGCC‑GCTGTGG‑GCCCGGC‑TTCCGTGGCGT‑CTCG‑GCA‑CT‑cccccctgggcttt > 2:1047270/1‑229 (MQ=255)
cTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTTTGGCGC‑TGTGGCCCTGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGGGGCGG‑CTCG‑CCA‑TT‑cccccttggggttt > 1:896568/1‑229 (MQ=255)
cTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTTGTGCGC‑TGTGGCCTGGGCCGAAA‑TGGCCGCG‑TATGTGC‑GCCCGCC‑TGCCGTGGCGG‑CCCG‑CCC‑TT‑CCCCATTTGGC‑ctt > 1:682752/1‑239 (MQ=255)
aTCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGCC‑TTCCGGGGCTG‑CCCG‑CCC‑TT‑CCCCATGTGGC‑ttttt > 1:232333/1‑237 (MQ=255)
gcacttct‑cCCTCTGATTTCGCCGTTTTTGGCGTTGACCCCCTGGCAGGCGTTTTTTGCCGATCCACAGTTACCGCAGGCATTTCTGGCAACGCTGGTGTCGACAACCATCGGGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAg < 2:491412/234‑1 (MQ=255)
gCTCC‑CACGCTGATTTCGCCTGCTTTGTCGTTGACCCACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAgcg < 1:241125/238‑1 (MQ=255)
ctct‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTGTGGCGC‑GGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTTCCACACgcgc > 1:256576/1‑238 (MQ=255)
ccccgcttattctcccTTCTTTGTCGGTTACACCTTGGCAGGCTTTATTTGCCGATCCCCAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCtt < 2:469966/225‑1 (MQ=255)
gATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTTCCCTGCTGGGGATTGTGGCGC‑TGGGGCCTGGGCCGGAA‑TGGCAGCG‑GTTTGGG‑GCCCGCC‑TCCCGGGGGTG‑GCCG‑CCC‑TT‑TCCCACGTGGCGTTTTGCCCCCACCCCCCtttggcct > 2:888521/1‑233 (MQ=255)
gATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGCAA‑TGGCAGCG‑TATGTGC‑GCCCGGC‑TGCCGTGGCTG‑GTCG‑CCA‑TT‑CCCCATTTGGC‑TTTTTCCACCAGGCCCCTTCTGccct > 1:953722/1‑239 (MQ=255)
atatCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCCTTGTTGGTTGCCCTGCTGGTGATTCGGGCGC‑CGGGGCCCGGGCCGGAA‑AGGCAGCG‑CATCTGCGGCCCCTC‑CGCGGGGGCCG‑CCGC‑CCA‑TT‑CCCCCT‑TAGC‑TTTTTGCACCCACGcccattcgccctt > 2:637208/1‑229 (MQ=255)
cGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGG‑GCCCGTC‑TGCCGGGGCTG‑CTCG‑CCA‑TT‑CCCCCTGGGGC‑CTTTGCCACCAGCGCCCTTTTCCTCTTTg > 1:469966/1‑237 (MQ=255)
cTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGGTTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGGAGCG‑GATGTGG‑GCCCGTC‑TGCCGTGGGTG‑CTAT‑CCC‑TT‑CCCCCTGTGGC‑TTTTGCCACCCGCGCCCCTCTCGCCTTTGGCGACggg > 2:1054268/1‑238 (MQ=255)
ttGTCGGTGACACCCTGGGAGGTGTTTTTTGCCGATCCACAGTGACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCAGCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAgg < 2:866021/239‑1 (MQ=255)
gtggTTGACCCTCTGGGCGGCGTTAGTTGCCTGTCCCCAGTTACCCCAGGCATTTCTGGCAACGCGGGGGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTTATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGgc < 2:78801/236‑1 (MQ=255)
gTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGgc < 2:699863/239‑1 (MQ=255)
tCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCCTTGTTTGTTGCCCTGCTGGGGGTTGTGGGGC‑TTCGGCCCGGGCCGGAA‑TTGGCCAG‑TACGGGG‑GCCCGCT‑TGCCCTGGCGGCCCCC‑CCT‑TT‑CCCCACGGGTC‑TTTTCCCCCCAGCCCCCtctcgcctttgtcacggggggggg > 2:406882/1‑216 (MQ=255)
tCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGG‑GCCCGCC‑TGCCCGGGCTG‑CCCC‑CCC‑TT‑CCCCCTGGTGC‑TTTTGCCCCCCGCCCCCTTCTTCCCTTTTTTGCCgggggggg > 2:292567/1‑237 (MQ=255)
cacacTGGCCGGCGTTATTGGCCGAGCCCCGGTTACCGCAGGCATTCCCGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTAt < 1:1054268/239‑1 (MQ=255)
gggaGGCGTTATTTGCCGGTCCACAGTGACCGCAGGCATTGATGGCAATGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTAt < 1:509642/236‑1 (MQ=255)
ggcggCTTTTTTTGCCGACCCCACGTTCCCGCGGGGTTGACTGGCCACGGTGGGTGCGACAACCGTCGCCGC‑GGTCGGGTCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTAtt < 2:947565/236‑1 (MQ=255)
ggCGTTATTTGCCGATCCACAGTTACCGCAGTCATTACTGGCAACGCTGGTGTCGGAAACCATCGGGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTc < 1:236381/238‑1 (MQ=255)
ggCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTGTGGCGG‑CGTGGCCCGGGCCGGAA‑TGACAGCG‑TAGTTGG‑GCCCGGCTTGCCG‑GGCTG‑CCCG‑GCA‑TTCCCCCAGTTGGC‑TTTT‑CCCCCAGCGCCCTTTTGTCTTTTGCTTACCGgggggggtcttttgagcatttc > 2:240326/1‑220 (MQ=255)
tATTTGCAGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGGTTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTAt < 1:50795/239‑1 (MQ=255)
tttGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGCAGGGGGGCTGCTTTATGACTATTTCCCGGAttt > 1:12695/1‑239 (MQ=255)
gCCGATCAACAGTTCCCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCAc < 1:934592/239‑1 (MQ=255)
tttcccccggcgttttttGGCAACGCTGGTGTCGAAAACCACCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGGTGGGGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATgg < 2:466880/222‑1 (MQ=255)
aCCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑CGTGGCCCGGGCCGAAA‑AGGCAGCG‑GATTGGC‑GCCCGTC‑TGCCGTGGGTG‑CCCGCCCT‑TT‑CCCCAT‑TGGC‑CTTTTCCCCCCACCCCCTTCTGCCTTTTCCTTCCGGGGGGCGGCTTTTTGGCCCTTTTCCCTAttttccccccccacagggac > 2:481717/1‑222 (MQ=255)
cGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGCCGGAGGGCTGCTTTATGACTATTTCCCGCATTTCACTCCGCCCATGGGCCGa > 1:773448/1‑239 (MQ=255)
cGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAggg < 2:657727/194‑1 (MQ=255)
cGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAggg > 1:657727/1‑194 (MQ=255)
cAGGCTTTCCTGGCACCGCTGGTTGGGACAACCATGCCGGG‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAtt < 2:773448/239‑1 (MQ=255)
ggCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAgcg < 2:64423/164‑1 (MQ=255)
ggCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAgcg > 1:64423/1‑164 (MQ=255)
ttgccggaaaCGGTGGTTGCGACAACCCTCGGGGC‑GGGCGGGGCATTGTTGATTGCCCTGGTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCAt < 2:232333/231‑1 (MQ=255)
ggcaCGCTGGTGGCGACACCCAGCGGGGG‑GGTGGGGGCTTTGTTGATTGCCCTGTGGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTc < 2:682752/235‑1 (MQ=255)
cAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑GATGTGC‑GCCCGGC‑TGCCGGGGCTG‑CTCG‑CCA‑TT‑CCCCCTGTGGC‑TTTTGCCACCAGCGCCCGTCTGCTCTTTTCTTGCGGGGGGCCGGTTTTTGCCATTTTCCCGGATTTCCCCCCCCCCATGGACCCAATTGGGACCGGTCTg > 2:391537/1‑239 (MQ=255)
cGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGc < 1:787401/239‑1 (MQ=255)
ggggggggccaaaCCAT‑GCGGCTGGTGGGGGGTTTGTTGATGCCCTTGCTGGGGGTTGTGGCGC‑GGTGCCCTGGGCCGAAA‑TGGCGGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCGCCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCt < 2:896568/228‑1 (MQ=255)
ggggTGTCGCAACCCCTCGGGGC‑GGTGGGGGTCGTGTTGTTTGCCGTGGTGGGGGTTGGGGCGC‑GGTGGCCGGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCt < 2:171551/237‑1 (MQ=255)
tggttgcGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCt < 1:8390/232‑1 (MQ=255)
tGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATGTTTGATTGGCCTGCTGGTGATGGGGGCGC‑TGTGGCCGGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGGC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCt < 1:291165/238‑1 (MQ=255)
gggggtcgaccacctcggggggggTGGGGGCTTTGTGGATTGCCCGGCGGGGGGTTGGGGCGC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGGCG‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCt < 2:63709/216‑1 (MQ=255)
tCGGCAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGGGGCGC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCAccc < 1:888521/238‑1 (MQ=255)
gACAACCATCGGGGG‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTg < 1:174474/239‑1 (MQ=255)
aCAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCCTTGCTGGCGGGGGGCTGCTTTATGACTATTTCCCCTTTTTTACTCCGCCAAAGGACCCATTTTGCATCGGTCTGGGCCCCACCCCTGc > 2:555165/1‑239 (MQ=255)
aCAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGGGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCCCCCGCCCCCTTTCTCCCTTTTCTGACGGGGGGCTGCTTTTTGCCCCTTTTCCCTATTTCACTCCCCCCATGGACCCGTTTTGCCACCGCCTGGGcccccccccttc > 2:522338/1‑235 (MQ=255)
cATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGGGGCTG‑CTCG‑CCA‑TT‑CCCCCTGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTTGCATCGGTCTGGGCCTCACCCTTGCAGTga > 1:238512/1‑239 (MQ=255)
tCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACTCTTTCACTgcaa < 1:292567/239‑1 (MQ=255)
cggc‑ggTCGGGGCATTGTGGATTGCCCTGCTGGTGAGTGTGGGGC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTgaaaga < 1:522338/238‑1 (MQ=255)
gtgggggCATTGTTGATTGCCCTGCTGGTGATTGGGGCGC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAgcg < 1:694032/235‑1 (MQ=255)
tCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCCCCCTTGCCGTGAAAGAAAGCGCa > 1:922316/1‑239 (MQ=255)
gcttttttgTTTGCCCGGTTGGTGATTGTGGGGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTc < 2:238512/232‑1 (MQ=255)
gCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑GGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTc < 1:576275/238‑1 (MQ=255)
gCATTGTTGATTGCCCGGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTc < 1:391537/238‑1 (MQ=255)
aTTGTTGATTGGCCTGGTGGTGATGGGGGCGC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCAGCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTGCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTctg < 1:351783/238‑1 (MQ=255)
tgtttgttGCCCTGGTGGTGGTTGGGGCGT‑GGGGGCCTGGGCCGAAA‑GGGCAGCG‑TTTGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTctgctg < 2:953722/233‑1 (MQ=255)
tgttgATTGCCGTGCTGGTGGTTGTGGCGC‑TGTGTCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTctgctg < 1:187112/239‑1 (MQ=255)
tgttgATTGCCCTGCTGGTGAGTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTctgctg < 1:406882/239‑1 (MQ=255)
tgttgATTGCCCGGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTctgctg < 1:778998/239‑1 (MQ=255)
aTTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTg < 1:751674/208‑1 (MQ=255)
aTTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTg > 2:751674/1‑208 (MQ=255)
tGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGCTTTTGCATCGGTCTGGGCCTCACCCTTTCCGGGAAAGAAAGGGCAttttggcttggggtct > 2:71046/1‑226 (MQ=255)
gCCCTGGTGGTGATTGTGGCGC‑TGGGGCCGTGGCCGAAT‑TGGCACCG‑GATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTTCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCtt < 1:637208/239‑1 (MQ=255)
gCCCTGGTGGGGGGTTTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCGGCG‑TATGTGC‑CCCCGGC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCtt < 2:99071/239‑1 (MQ=255)
ccggctgGTTGTTGTGGCGC‑TTTTGCCTGGGCCGAAA‑TGGCAGGG‑TATGGGC‑GCCCGTC‑CGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTag < 1:424269/236‑1 (MQ=255)
ccggctgGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTag < 1:899917/236‑1 (MQ=255)
tgctgGTGATTGTGGGCC‑TGGGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTagca < 1:555165/239‑1 (MQ=255)
tgctgGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTTTGGATCTTagca > 1:576749/1‑239 (MQ=255)
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TGCGCTGGAACAAGAATGGCTACACCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCT‑CACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGC‑GGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGC‑TGTGGCCTGGGCCGAAA‑TGGCAGCG‑TATGTGC‑GCCCGTC‑TGCCGTGGCTG‑CTCG‑CCA‑TT‑CCCCATGTGGC‑TTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCA > NC_000913/1837197‑1837667
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
