Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F17 I0 R1 160 98.0 2214160 89.0% 1970602 222.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 973,698 A→G 11.7% G54G (GGA→GGG)  smtA → putative S‑adenosyl‑L‑methionine‑dependent methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913973,6980AG11.7% 237.8 / 2.1 97G54G (GGA→GGG) smtAputative S‑adenosyl‑L‑methionine‑dependent methyltransferase
Reads supporting (aligned to +/- strand):  ref base A (17/65);  new base G (13/2);  total (30/67)
Fisher's exact test for biased strand distribution p-value = 1.78e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGGTTCATTCTCGCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCAG  >  NC_000913/973461‑973935
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               
gggTTCATTCTCGCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGgag                                                                                                                                                                                                                                                <  1:291844/239‑1 (MQ=255)
   ttCATTCTCGCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCC‑CAAAAAC‑TGCGTTGGCTGGATGCTGGGGGTGGGGAA‑g                                                                                                                                                                                                                                            >  1:523510/1‑239 (MQ=255)
            gCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCACCCGGTGTAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAACGTTTTCCCGTAAAATTTACGGCTCCACCAAAGGGCAGCTACGACAGGCGATTCTGTGGCAGGATCTCGAT‑GCGGGTCTTGCGGACAAGGGCACGCCAAAAAG‑GGCGTGT‑CGGGGTGCTGGCGGGGGGGAA‑ggggcagcaa                                                                                                                                                                                                                                   >  2:233390/1‑232 (MQ=255)
            gCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCCCGATCGCGTG‑CTGGCGGAAATGGGCCTG‑CAAAAAC‑TGCGTGGGCTGGAGGCTGGCGGTGGGGGA‑GGGCGGAccc                                                                                                                                                                                                                                   >  1:944105/1‑238 (MQ=255)
                 ggCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGATTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTTTGGCAGGAACCCGGTCGCGGG‑CTGGCGGAAATGGGCCCG‑CCAAAAC‑TGCGGTTGCTGGCAGCTGGGGGGGGGGAA‑ggggcgaaccgaaaa                                                                                                                                                                                                                              >  2:298197/1‑227 (MQ=255)
                  gCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGGGCTGGATGCTGGCGGTGGGGAA‑GGGCAGACCCCAATCa                                                                                                                                                                                                                             >  1:508945/1‑239 (MQ=255)
                     gttaCAAGATAGCGTCTTTATCAAGAATCGTCTTAGCCAACCGGTGGAAAAAGCAATGCAGGTTCGCCATTTTGATGATATTGGGGAAAAGTTTTCCCGTAATATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCaaaa                                                                                                                                                                                                                          <  2:315025/236‑1 (MQ=255)
                         cAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGc                                                                                                                                                                                                                      <  1:1038993/239‑1 (MQ=255)
                              ttgCGTTTTTTTCAGAAATCTTTTTAGCCAAACGGTGGAGAAAGCAAGGCAGGATCGCAATTTTGATTATTTTGCGGAAAAGTTTTCCCGTAACATTTACGGCCCCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGc                                                                                                                                                                                                                 <  2:508945/237‑1 (MQ=255)
                                   tCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGGGAA‑GGGGAGACCGCAATCAAAAAGGCCGAGCGTgg                                                                                                                                                                                                             >  1:807258/1‑238 (MQ=255)
                                   tCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGGGTGCTGGATGCTGGCGGTGGGGAA‑GGGCGGACCGCAATCAAAATGGCCGAGCGTggg                                                                                                                                                                                                            >  1:1033354/1‑239 (MQ=255)
                                      ttATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGCGGGCTGGATGCTGGCGGTGGAGGA‑GGGCAGGACGCAATCAAAATGGCCGGGCGTGGGCa                                                                                                                                                                                                          >  1:489992/1‑238 (MQ=255)
                                      ttATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGACCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGGGCTGGGTGCTGGGGGGGGGGAAGGGGCAGACCAAAACCAAAA‑GGCCggggggggggac                                                                                                                                                                                                         >  2:1034520/1‑228 (MQ=255)
                                          cAGAAAACTTCTTAGCCCACCGGTGGAGAAAGCAATGCAGGATCCCAATTTTGATGATTTTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAgg                                                                                                                                                                                                     <  2:849826/239‑1 (MQ=255)
                                             aaaaCGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGGGTGCTGGATGCTGGCGGTGGGGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGGGGGCCTCAGG‑TCa                                                                                                                                                                                                 >  1:121568/1‑239 (MQ=255)
                                                  gttttggCCAACCGGTTGGGAAAGCCAGTCAAGATGGGAATTTTGATGGTAGTGCGGAAAAGTTTTCCGGTAACATGTCAGGCACCACCAAAGGGCAGCTTCGACAGGCTAGTCTGTAGCAGGATCTCGATCGGGTG‑CTGGCGGAAAGGGGCCCG‑CAAAAAC‑TGAGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGTCATCAGG‑TCATTTTa                                                                                                                                                                                            <  2:234913/233‑1 (MQ=255)
                                                  ctCTTATCCCACCGGTGGGGAAAGCAATGCCGTGTTGACATTTGGATGATATTGCGGAAAAGTTTTCCCTGAACATTTACGGCACCAACAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGACCGCGTG‑CTGGGGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑TGGCAGACCGCAATCAAAATGGCCGAGCGTGGGGATCAGG‑TCATTTTa                                                                                                                                                                                            <  2:1100019/238‑1 (MQ=255)
                                                     ttAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATg                                                                                                                                                                                          <  1:1001089/238‑1 (MQ=255)
                                                       aagaaaCGGGTGGAGAAAGCAGTGTAGGTTGTCAATTTTGGTGAAAGTTGGGAAAGTTTTGCCGGTAACATTTACGCAGCCACCAAAGGGCATCTGCGACAGGCTATTCAGTGGCATGATCTCAATCGCTTG‑CTGGCGTAAATGGACCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTGTATGCGa                                                                                                                                                                                       <  2:512233/235‑1 (MQ=255)
                                                             ccGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGGGAA‑GGGCAGACCGCAATCAAAATAGCCGAGCGTGGGCATCAGG‑GCATTTTTTGCGATCtttt                                                                                                                                                                                 >  1:397098/1‑238 (MQ=255)
                                                              cGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCAGCCGTGGGAATCAGG‑GCATTTTATACCATCtt                                                                                                                                                                                   >  1:170363/1‑236 (MQ=255)
                                                                 tGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGGGGGGAA‑GGGCGACCCGCAATCAAAATGGCCGGGCGTGGGCACCAGG‑TCAtttttttggaacttttttgc                                                                                                                                                                             >  1:917907/1‑223 (MQ=255)
                                                                  ggAGAAAGCAATGCAGGTGCGAAATTTTGAGGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTgcgc                                                                                                                                                                            <  2:1043856/239‑1 (MQ=255)
                                                                  ggAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTgcgc                                                                                                                                                                            <  1:452042/239‑1 (MQ=255)
                                                                   gagaAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTgcgc                                                                                                                                                                            <  1:318962/238‑1 (MQ=255)
                                                                          cAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTACGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑CGCGTGTGCTGGATGCGGGCGGTGGAGAA‑AGGCGGACCGCAATAAAAAAGGCCGGGCCAGGGGGTCGGG‑GGATTTTGTGCGAGCttttttggcagtggggt                                                                                                                                                                    >  2:444280/1‑225 (MQ=255)
                                                                            aTGGAGGTTCCCAATTTTGATGATATTGCGGAAAAGTTTTCCCGGAACATTTTCGGCACCACCAAAGGGCAGCTTCGACAGGCTATGCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGa                                                                                                                                                                  <  2:807258/239‑1 (MQ=255)
                                                                            aTGCAGGATCCTAATTTTGAAGATTTTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGGTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGa                                                                                                                                                                  <  2:888573/239‑1 (MQ=255)
                                                                             tGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCCGACCGCAATCAAAATGGCCGAGCGGGGGCATCAGG‑TCATTTTATGCGATCTTTCTGGGCAGATGATCGa                                                                                                                                                                  >  1:341262/1‑238 (MQ=255)
                                                                                  gagcGCAATTTTGATGATATTGCGGAAAAGTTTTCCAGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CCGGCGGAGATCGGCCCG‑CAAAAAC‑TGCGCGTGCTGGATGTTGGCGGGGGGGGA‑AGGCGGACCGCAAACAAAAAAGCCCGCCGTGGGTAACAGGAGCATTTT‑TGCGAGCTTTCTgcgccaacaatcggcggggc                                                                                                                                                            >  2:955538/4‑223 (MQ=255)
                                                                                  gATCGCAATTTTGATGATAGTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGGGGA‑GGGAAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATCCGAGCTTTCTGCGCAGAGGATCGACCgcgc                                                                                                                                                            >  1:1090210/1‑239 (MQ=255)
                                                                                       cAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCCGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑GCATTTTATGCGATCTTTCTGCCCAGATGATCGACCGAGCAAAAc                                                                                                                                                       >  1:393330/1‑239 (MQ=255)
                                                                                         aTTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAg                                                                                                                                                     <  1:979107/239‑1 (MQ=255)
                                                                                          ttttGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCt                                                                                                                                                                                <  1:454461/211‑1 (MQ=255)
                                                                                                    atTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAg                                                                                                                                           <  1:1034520/238‑1 (MQ=255)
                                                                                                      tGCGGAAAATTTTTCCCTTAACTTTTACGGCACCACCAAAGGGCAGCTTTGACAGGGTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCaa                                                                                                                                        <  2:341262/239‑1 (MQ=255)
                                                                                                          gAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTTTgcgc                                                                                                                                                                            >  1:120523/1‑199 (MQ=255)
                                                                                                          gAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTgcgc                                                                                                                                                                            <  2:120523/199‑1 (MQ=255)
                                                                                                            aaaTTTTTCCCGTACAATTTAAGCCCCCACCAAAGGGGAGCTTCGAAAGGCTTTTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGgtg                                                                                                                                  <  2:673672/239‑1 (MQ=255)
                                                                                                                ttttCCCGTGAATTTTTCCGCACCGCCAAAGGGACGCGTCGCCAGGCTAGTCTGGTGCAGGAGTCCGATGGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCCGAAGCAAAAGGTGTGAg                                                                                                                              <  2:1090873/239‑1 (MQ=255)
                                                                                                                    cccGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGac                                                                                                                          <  1:257875/239‑1 (MQ=255)
                                                                                                                     ccttatttttcacggtccaatcaAAGGGCAGCTTCGACTGGCTAATCTGGGCCAGGATCTCGGGCGGGTT‑CTGGCGGAAAGGGGGCCG‑CAAAATA‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGGGCGTGGGTATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATTATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTCTGAGCGaca                                                                                                                         <  2:1085751/218‑1 (MQ=255)
                                                                                                                         tcagttttCGGCCCCCCCAAAGGGCCGCTTCGGAAGGCTATTGCGGGGCAGGATCTCGATCGCGGG‑CTGGCGGACATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  2:1090210/235‑1 (MQ=255)
                                                                                                                         taCATTTACGGCCCCCCCAAAGGGCGGCTTCGGCGGGCTTTGCTGTGGCAGGATCTGGATGGGGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGGGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTAGGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  2:397098/238‑1 (MQ=255)
                                                                                                                         aaCATTTCCGGTCCCTCCAAAGGGGCGCTTCGACAGGCTCTTCTGGGGTAGGTTGTTGAGTGCGTG‑CTGGCAGAAATGGCGCCG‑CAAAAAC‑TGTGTGTGCTGGATGGTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGTGGCAGAAGCAAAACGTGTGAGCTACAatat                                                                                                                     <  2:360073/239‑1 (MQ=255)
                                                                                                                         aaCATTTACGGCACCACCGAAGGGCATCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCTTG‑CTGGCAGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGGATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  1:24/239‑1 (MQ=255)
                                                                                                                         aaCATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  1:751532/239‑1 (MQ=255)
                                                                                                                         aaCATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  1:889089/239‑1 (MQ=255)
                                                                                                                          ccaattacgtgccccgcaAAGGGCAGTTTCAGCAGGCTATTCTGGGGCAGGGTGCCGGTCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TTCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  2:994026/222‑1 (MQ=255)
                                                                                                                                ccgggcccaccaAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAAttt                                                                                                              <  1:416934/233‑1 (MQ=255)
                                                                                                                                          caAAGGGCAGCTTCGACAGGTTATTCTGTGGGAGGAGTTGGATTGGGGG‑CTGGGGGAAATGGGCCCG‑CAAAAAC‑TGCGGGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTgcg                                                                                                    <  2:419897/239‑1 (MQ=255)
                                                                                                                                          caAAGGGCAGCTTCGAAAGGCTATTCGGTGGCAGGACTTCGGTCGCGTG‑GTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTgcg                                                                                                    <  2:1021943/239‑1 (MQ=255)
                                                                                                                                           aaaGGGCAGGTTCGAAAGGGTATTCTGTGGCAGGATTTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTgcgc                                                                                                   <  1:618098/239‑1 (MQ=255)
                                                                                                                                                gCAGGTTCGACAGGCTATTCTGTGGCAGGATTTTGGTCGGGTG‑CGGGGGGAAATGGGCCCG‑AAAAAAC‑TGCGTGTGCTGGAGGCTGGGGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGGGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCt                                                                                               <  2:487290/238‑1 (MQ=255)
                                                                                                                                                gCAGCTTCGACAGGCTATTCTGTGGCAGGATCGCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCt                                                                                               <  1:784703/238‑1 (MQ=255)
                                                                                                                                                   gCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATTATCGACCGGGCAAAACAGGCGGCCGAAGCAAAAGGGGTGAGCGGCAAAATGCAATTTATACATTGcgccgccccgg                                                                                           >  1:286421/1‑234 (MQ=255)
                                                                                                                                                   gCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCCGAAGCAAAAGGGGGGGGCGACAACATGCAATTTATACATTGCGCCCCTCAgg                                                                                           >  1:1098243/1‑239 (MQ=255)
                                                                                                                                                    cTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGACGCAAAAAGTGTGAGCGCCACAATGCAATTTATACATTTCGCCGCCCAGGa                                                                                          >  1:986106/1‑239 (MQ=255)
                                                                                                                                                    cTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑GCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGGGTGAGGGACAACATGCAATTTTTACATTTGGCCCCCCAggg                                                                                          >  1:1021943/1‑238 (MQ=255)
                                                                                                                                                    cTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGGGGGCATCAGG‑TCCATTTTTGCGACCTTTCTGCGCCACGGGACGACCCCGCAAAAAAGGGGGCGGAAAGAAAAGGGGGGGACGACAACAAGCAATTtataaaaatggccccccagga                                                                                          >  2:295390/1‑222 (MQ=255)
                                                                                                                                                    cTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGGGTGCTGGATGCTGGCGGGGGAGAA‑GGGCCGACCGCAATCAAAATGGCCGAGCGGGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGGTCCGCCGCGCAAAACAGGCGGCTAAAGCAAAAAGTGGGTGCGACAAAAAGCAACTTATAAAATTCGCCCGTCAggg                                                                                          >  2:971401/1‑238 (MQ=255)
                                                                                                                                                             gCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATg                                                                                                                    <  1:900443/204‑1 (MQ=255)
                                                                                                                                                              cTATTCTTTGGCAGGTTCTCGTGCGAGTG‑TGTGGGGAAATGGGACCG‑CCAAAAC‑TGCGTGTGCTGGATGCGGGCGGTGGAGAA‑GGGCAGACCGCAAGCAAAATGGCCTAGCGTTGGCAGCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCtt                                                                                  <  2:311695/237‑1 (MQ=255)
                                                                                                                                                                       ggCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGGGGAGGA‑AGGCAGACCGCAATTAAAAAGGCCGCACGGGGGGAGCAAG‑TCACTTTATTCGATCTTTCTTCGCAGATGATAGACCGCGCAAAACAGGCGTCCGACACAAAAGGTGTGAGGGCAAAAAAGCAAATTTTAAATTGTGCGCCTCAGGGAGGTGCTTCGCAATTGGaa                                                                       >  2:910809/1‑239 (MQ=255)
                                                                                                                                                                          aGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTTAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAAc                                                                     <  1:434033/238‑1 (MQ=255)
                                                                                                                                                                           ggATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAATGGGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCCGGAGGTTGGTTCGCCTTTGGGAAct                                                                    >  1:106758/1‑237 (MQ=255)
                                                                                                                                                                             aTCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTgcg                                                                                                    <  1:189493/204‑1 (MQ=255)
                                                                                                                                                                               ttcGGTCGCGTT‑CTGGTGGAAATGGGCCCG‑CAAAAAG‑TGACTGTGCTGGGTGCTGGAGGTGGAGAA‑GGGCAGACCGCAATCAAAAGGGCCGAGCCTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGt                                                               <  2:481022/238‑1 (MQ=255)
                                                                                                                                                                                   aTCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCCGAAGCAAAAGGTGTGAGCGCCCACATGCAATTTATAAATTGCGCCCCCCCAGATGTTGCTTGGCATTGTGAAACGCCCGTTgta                                                           >  2:100174/1‑237 (MQ=255)
                                                                                                                                                                                    ttcggTG‑CTGGCCGAAATGGGCCAG‑AAAAAAC‑TGGCTTAGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:150645/235‑1 (MQ=255)
                                                                                                                                                                                    tCGCTTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGAATCAGT‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:233390/239‑1 (MQ=255)
                                                                                                                                                                                    tCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:810920/239‑1 (MQ=255)
                                                                                                                                                                                    gcgcgGG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGGGTGGGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  2:1098243/238‑1 (MQ=255)
                                                                                                                                                                                     cgcgTG‑CTGGCGGAAATGGTCCCG‑CAAAAAC‑TGCGAGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:734134/238‑1 (MQ=255)
                                                                                                                                                                                     cgcgTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:298197/238‑1 (MQ=255)
                                                                                                                                                                                     cgcgTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:295390/238‑1 (MQ=255)
                                                                                                                                                                                     cgcgGG‑CTGGGGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATc                                                          <  1:314781/238‑1 (MQ=255)
                                                                                                                                                                                          ttcTGGCGGAAATGGGCCCT‑CAAAAACGTGC‑TGTGCTGGATGCTGGCGGTTGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGata                                                     <  2:286421/237‑1 (MQ=255)
                                                                                                                                                                                           gcgggCGGAAATGGGGCCG‑CAAAAAC‑GGCGTGGGCGGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGata                                                     <  2:944105/235‑1 (MQ=255)
                                                                                                                                                                                             tGGGGGAAATGGGCCCG‑CAAAACC‑CGCGGTGGCTGGATGATGGCGGGGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCTTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTg                                                  <  2:737069/239‑1 (MQ=255)
                                                                                                                                                                                             tGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAGACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATAtt                                                   <  1:368492/238‑1 (MQ=255)
                                                                                                                                                                                                    aaTGGGCCCG‑CAAAAAC‑GTCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATg                                           <  1:928800/239‑1 (MQ=255)
                                                                                                                                                                                                     aTGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGGGGTGGAGAA‑GGGCAAGCCGCAATCAAAATGGCCGGGCGGGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATg                                           <  2:677302/238‑1 (MQ=255)
                                                                                                                                                                                                      tGGGCCCG‑GAAAAAC‑TGGGTGTGCTGGATGCTGGCGGGTGAAAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCg                                         <  1:1008634/239‑1 (MQ=255)
                                                                                                                                                                                                      tGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCg                                         <  1:100174/239‑1 (MQ=255)
                                                                                                                                                                                                               gaaaaaC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGa                                 <  1:4526/238‑1 (MQ=255)
                                                                                                                                                                                                                  aaaC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACAt                                                                                                                     <  1:95808/152‑1 (MQ=255)
                                                                                                                                                                                                                  aaaC‑TGCGTCGGCTGGATGCTGGCCGTGGAGAA‑GGGCAGACCGCAATCAAAATTGCCGAGCGTGGGCAACAGG‑TCATTTTAGGCTATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATAGAGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAgtg                              <  1:944224/239‑1 (MQ=255)
                                                                                                                                                                                                                    aC‑TGGGGGTGCGGGAGGCTGGGGGGGGAAAA‑GGGCAGACCCCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAgtggg                            <  2:121568/239‑1 (MQ=255)
                                                                                                                                                                                                                     c‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCCACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAgtgggt                           <  1:729096/239‑1 (MQ=255)
                                                                                                                                                                                                                        tggggtgttgggttgtGGCGGTGGGGAG‑GGGCGGACCCCAATCAAAAGGGCCGGGCGTGGGCATGAGG‑TCATTTGATGGGATTTTTCTGCGGAGAGTGTCGGCCGCGCGAAACGGGCGTGAGAAGCAAAAGGTGTTAGGGACAACATGCAATTTATACATTGCGCCGCTCAGGATTTTGCTTCGCATTTGGAACCGCCCGTTGATCTGATATTGTTCCGTGCGGTGCTCGAgtgggtgg                         <  2:554610/224‑1 (MQ=255)
                                                                                                                                                                                                                          gtgtGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGGGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAgtggttg                          >  1:554610/1‑236 (MQ=255)
                                                                                                                                                                                                                                   aTGCTGGGGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCg               <  2:361346/238‑1 (MQ=255)
                                                                                                                                                                                                                                   aTGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCg               <  1:202708/238‑1 (MQ=255)
                                                                                                                                                                                                                                    tGCTGGCGGTGGGGAA‑GGGCAGACCGCAATCAAAATGGCCGGGCGTGGGGAACAGG‑TCACTGTAGGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAGGCAAAAGGTGTGAGCGACAACGTGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCACGTTGATCTGATATTGTGCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCa             <  2:989828/239‑1 (MQ=255)
                                                                                                                                                                                                                                        gggggTGGAGAA‑GGGCAGACCGGAATCAAAAGGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGAGCGACCGCGACAAACAGGCGGACGAAGCAAAAGGTGGGAGCGCCAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCg          <  2:269412/235‑1 (MQ=255)
                                                                                                                                                                                                                                            gTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGGGCTCGAGTGGGTGGCTGATCCCCGCAGCGGATTg     >  1:730635/1‑239 (MQ=255)
                                                                                                                                                                                                                                              ggAGAA‑GGGCAGATCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTGCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCa   <  1:203987/239‑1 (MQ=255)
                                                                                                                                                                                                                                                agaA‑GGGCAGGCCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCAg  <  1:840447/238‑1 (MQ=255)
                                                                                                                                                                                                                                                agaA‑GGGCAGGCCGCAATCAAAAGGGCCGGGCGGGGCGATAAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCAg  <  2:915180/238‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               
GGGTTCATTCTCGCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTAGCCAACCGGTGGAGAAAGCAATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTG‑CTGGCGGAAATGGGCCCG‑CAAAAAC‑TGCGTGTGCTGGATGCTGGCGGTGGAGAA‑GGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGG‑TCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCAG  >  NC_000913/973461‑973935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A