Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F17 I0 R1 160 98.0 2214160 89.0% 1970602 222.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,138,036 A→C 17.3% G333G (GGT→GGG)  gldA ← glycerol dehydrogenase, NAD+ dependent, 1,2‑propanediol:NAD+ oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,138,0360AC17.3% 228.7 / 4.8 107G333G (GGT→GGG) gldAglycerol dehydrogenase, NAD+ dependent, 1,2‑propanediol:NAD+ oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (56/26);  new base C (3/21);  total (59/48)
Fisher's exact test for biased strand distribution p-value = 1.17e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

AGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAGGCCGTTATGCACTGCG  >  NC_000913/4137799‑4138273
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                              
aGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGGGAATGGTTTCa                                                                                                                                                                                                                                                >  1:963620/1‑238 (MQ=255)
        ccttactctgcataaaaaaGCACCCAAATGCAATAT‑TTGCTAGGCAGTGCGTAAGCC‑GATAAAGCGGAGGTCCTCGGGCAATTTTGCGTTCAAACTCCGGGACAAGCCGGGAGTGTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGCCCGTTCTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGca                                                                                                                                                                                                                                      <  2:170171/224‑1 (MQ=255)
                 gCCTACAAAAGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCt                                                                                                                                                                                                                             >  1:682347/1‑239 (MQ=255)
                   cTACAAAAGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGGAGCGCATCAGGCAATTTTGCGTTCAAACTACCGGACAAGCCGGGAGTTTGGAGCAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTCCTGGTCGGCTACCAGCACAGCGGCGTAAACCTGACCTG‑G‑TGT‑GGGGCCCCCAGGCAAGT‑GTGGAAGGGTTTcc‑ccccttgccactgccccttc                                                                                                                                                                                                                           >  2:629990/1‑221 (MQ=25)
                     aCAAAAGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCCGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCC‑CCTTCTGCCCATGCCCCTTCt                                                                                                                                                                                                                          >  2:204205/1‑238 (MQ=255)
                       aaaaGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGACCGGCGTAAACCTGATCTG‑G‑CCT‑CGCGCCGCCAGGCATGT‑CGTGAATGGTTTCA‑CCTTCTGCCCATGCCGCTCCtac                                                                                                                                                                                                                        >  1:631187/1‑236 (MQ=255)
                            cACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTAA‑CCTTCTGCACATGCCGCTTCTGCCCCAAt                                                                                                                                                                                                                  >  1:194837/1‑239 (MQ=255)
                              cGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTTTGCACATGCCGCTTCTGCCACAAtt                                                                                                                                                                                                                 >  1:230914/1‑238 (MQ=255)
                              cGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGca                                                                                                                                                                                                                                      >  1:45321/1‑217 (MQ=255)
                              cGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAAtt                                                                                                                                                                                                                 >  1:679736/1‑238 (MQ=255)
                                       aaTATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑C‑CGTACGCG‑CGCCAGGCACGT‑TGCGAATGGTTTCA‑CCTTCTGCCCATGCCGCTTCTGCCACAATTCGACttttg                                                                                                                                                                                                        >  2:43992/1‑237 (MQ=255)
                                         tatatTGC‑GGGGGTTGCGTAGGCCTGAA‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGAAAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGcc                                                                                                                                                                                                     <  1:198856/239‑1 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGCCCGAACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑GCCGCCGCCAGCCATGT‑TGTGACTGGTTTCA‑CCTTCTGAACATTCCGCTTCTGGCCCAATTCGCATTTTCGCCgggta                                                                                                                                                                                                >  1:1082620/1‑237 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTCCCAGCAGAGCGGCGTAAACCTGATCTT‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTCCCCAAATTACCCTTTTGGCCGGGAc                                                                                                                                                                                                >  2:1013522/1‑239 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTTGCCGGGAc                                                                                                                                                                                                >  1:193334/1‑239 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCgggc                                                                                                                                                                                                 >  1:103845/1‑237 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGa                                                                                                                                                                                                 >  1:1086777/1‑238 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCAGTT‑TGTGAATGGTTCAA‑CCTTCTGACAATGCCGCTTTCGCCCCAATTTGCATTTTCGCAGGGAc                                                                                                                                                                                                >  2:1033968/1‑239 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CCT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCCAATGCCCCTTCTGCCACAATTCGAATTTTACCCgggcc                                                                                                                                                                                                >  2:60636/1‑237 (MQ=255)
                                              tGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCACGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGACCGGCGTAAACCTTATCTG‑G‑CTT‑CGCGCCGCCAGGCCTGT‑TGTGACTGGTTTCC‑CCTTCTGCACATGCCGCTTCTCCCCCAATTCGCATTTccgccgtggc                                                                                                                                                                                                >  2:330390/1‑235 (MQ=255)
                                                ccagggatttggtgggctgtaT‑AAGGGTGGCGCATGGGGAAATTTTGCTTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACa                                                                                                                                                                                               <  2:880423/219‑1 (MQ=255)
                                                    agaTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTACACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACAAGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACAtctt                                                                                                                                                                                           >  1:524015/1‑239 (MQ=255)
                                                    agaTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGca                                                                                                                                                                                                                                      <  1:598824/196‑1 (MQ=255)
                                                    agaTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGca                                                                                                                                                                                                                                      >  2:598824/1‑196 (MQ=255)
                                                    agaTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGAATTTTCGCCGGGCCAtctt                                                                                                                                                                                           >  1:441877/1‑239 (MQ=255)
                                                     gatgtcGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACAtctt                                                                                                                                                                                           <  1:717744/233‑1 (MQ=255)
                                                      aTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAATTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATTT‑TGTGAATGGATTCA‑CCTTCTGCACATGCAGCTTCTGCCCCAATTCGCATTTTTCCCGGGCAAccttct                                                                                                                                                                                         >  2:864648/1‑239 (MQ=255)
                                                      aTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGCGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATGTG‑G‑CGT‑CGGCCCGCACGGCATGT‑GTGGATTGGTTTTC‑CCTTCTGCACAGTCCGCCTCGGCCCCACTTCCGATTTTTCCCggggacgtcctt                                                                                                                                                                                         >  2:191581/1‑230 (MQ=255)
                                                      aTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACAtcttct                                                                                                                                                                                         >  1:909541/1‑239 (MQ=255)
                                                      aTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCCCCGGGACAtcttct                                                                                                                                                                                         >  1:858125/1‑239 (MQ=255)
                                                      aTTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCACGCATGT‑TGTGAAGGGTTTCA‑CCTTTTGACAATGCCCCCTCTGCCACAATTCGCATTTTTGCCGGGCAAtcttct                                                                                                                                                                                         >  2:324076/1‑239 (MQ=255)
                                                       ttGCGTAGGCCTTAT‑AAGCGTAGCGTCTCAGACAAGTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGCAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAACCCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATcttctt                                                                                                                                                                                        <  1:500859/239‑1 (MQ=255)
                                                        tGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGAAATCTTCttt                                                                                                                                                                                       >  1:790365/1‑239 (MQ=255)
                                                         gCGTTGGCCTGAT‑AGGCGGTGGGAATGGGGCAATTTTGCTTTCAAACTCCCGGAAAAGCCGGGATTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAGCGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTa                                                                                                                                                                                      <  2:679736/239‑1 (MQ=255)
                                                         gCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCgggcacctcttttta                                                                                                                                                                                      >  2:823604/1‑227 (MQ=255)
                                                         gCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACCCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTa                                                                                                                                                                                      <  1:418004/239‑1 (MQ=255)
                                                         gCGGAGGGCGGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAACCTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGGGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTa                                                                                                                                                                                      <  1:629990/239‑1 (MQ=255)
                                                            tAGGCCTGAT‑AAGCGTAGCGAATCAGGCAATTTTGCGTTCAACCTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAat                                                                                                                                                                                    <  1:341967/238‑1 (MQ=255)
                                                                ccTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCATGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGCCATCTTCTTTAATATcaa                                                                                                                                                                               >  1:149485/1‑237 (MQ=255)
                                                                    aT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGcc                                                                                                                                                                                                     <  1:491888/213‑1 (MQ=255)
                                                                    aT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTg                                                                                                                                                                           >  2:533244/1‑239 (MQ=255)
                                                                    aT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTg                                                                                                                                                                           >  1:1020478/1‑239 (MQ=255)
                                                                            tAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCgaga                                                                                                                                                                    >  1:296014/1‑239 (MQ=255)
                                                                                 ccttcggCATTTTTGCGTTCAAACCCCCGGACAAGCCGGGGGTTTGGGGTAGGTTTTTCCCCCCCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTa                                                                                                                                                                <  2:963620/233‑1 (MQ=255)
                                                                                    tgggCAATTTGGGGTTTAAACCCCCGGACAAGCCGGGAGGTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTgg                                                                                                                                                            <  1:1013522/237‑1 (MQ=255)
                                                                                    cAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTTAGCGAGAGTTATTg                                                                                                                                                             >  1:1070053/1‑238 (MQ=255)
                                                                                      gacAATTTTGCTGTAAACCCCGCGGACAGGCCGGGGGTTTGGTGTAGGTTATTCCCACACTTGCAGGAAACGGTGACCGTCCTGGTGCGGTCCCAGCAGAGCGGCGTAAACCTGAGCTG‑G‑CGT‑CGGGCCGCCAGGAATGG‑CGTGAATGGTTTCA‑CCTTCTTCACATGCCGCTTCTGCCACAATGCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCa                                                                                                                                                          <  2:631187/237‑1 (MQ=255)
                                                                                                 cttcaacccccgcgcaaaGGCGGGGTTTTGGATTGGGTTTTTCCCACGCTTGCAGGAACCGCTGACCGCACGGGTCGGCTGCCAGCAGAGGGGCGTAAACTTGATCTG‑G‑GGT‑CGCCCCGCCAGGCATGT‑TGTGAATGGTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCa                                                                                                                                               <  2:230914/223‑1 (MQ=255)
                                                                                                  ttaaaaCTCCGGGACAAGCCGGGGTTTTGGAGTAGTTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCa                                                                                                                                               <  2:45452/235‑1 (MQ=255)
                                                                                                  ttCAACCCCCGGGACAGGCGGGGAGTTTGGGGTGGTTTATGCCCCCTTTTGAAGGAACGGTTTGCCGTCCTGGTCGGGTACCAGCAGGGCGGCGTAAACCTGATCTG‑G‑CGG‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCGTCTGCACAGGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCa                                                                                                                                               <  2:441877/238‑1 (MQ=255)
                                                                                                  ttCAAACCCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCa                                                                                                                                               <  1:204205/238‑1 (MQ=255)
                                                                                                   gactgcTCCCGTACAAGCCGGGAGTTTGGAGTAGGTTATTCCCGCTGTTGCAGGAAACGCTGACCTTACTGGGCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCa                                                                                                                                               <  1:310/232‑1 (MQ=255)
                                                                                                                 aaGCCGGGAGTTTGGAGTAGGTTAGTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTa                                                                                                                               <  1:513277/239‑1 (MQ=255)
                                                                                                                   gCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGCCATCTTCTTTAATATCCATTTGAGCGAGAGTTATTGGCAAACCACCCCCATGGCCAAgggactagc                                                                                                                               >  2:310/1‑231 (MQ=255)
                                                                                                                       agggcgtggttgtttaagggaccACTCTTGGGGGAACCGGTGACCGTACGGGGCGGGTGCCGGCAGAGCGGCGTAAACCGGACCTG‑G‑CGT‑CGCGCCGCCGGGCATGT‑TGTGAATGGTTTCC‑CCTGCTGCCGATGCCGCTGCTGCCACGATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGtt                                                                                                                          <  2:567323/217‑1 (MQ=255)
                                                                                                                          gTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGTTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCg                                                                                                                       <  1:60636/238‑1 (MQ=255)
                                                                                                                           gttGGGGGAGGTTGTTCCCCCGCTTCGCGGAAACGGTGCCCGTACGGGGCGGCTACCATCAGGGGTGCGTAACCCTGATCTGCG‑CG‑‑CGCGCCGCCAGTCATGT‑TGTGAATGGTTTCC‑TCTTCGGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGa                                                                                                                      <  2:1082620/237‑1 (MQ=255)
                                                                                                                                      ttATCCCCTCTCTTGCAGTAAACGCTGACCGTACTGGTCGGGTACCAGCAGAGGGGCGTAAACCTGATCGG‑G‑CGG‑CGGCCTGCCAGGC‑TGTGTGTAAATGGTTTCA‑CCTTCTGCAAATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAATCCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCg                                                                                                          <  2:800747/239‑1 (MQ=255)
                                                                                                                                         ttCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGAACTCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGGTTCGCTTTCCTCCACGGgcg                                                                                                       >  2:544628/1‑239 (MQ=255)
                                                                                                                                          tCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGGTTTCCTCCACCGgc                                                                                                        >  1:306083/1‑237 (MQ=255)
                                                                                                                                          tCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAATTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGgcgc                                                                                                      >  1:528123/1‑239 (MQ=255)
                                                                                                                                           ccccCTCTTGCAGGAAAGGTGGACCGTCTTGGGCGGCTACCGGCAGAGCGGCGTAAACCGGATCGG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGGGAATGTTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCa                                                                                                     <  2:306083/239‑1 (MQ=255)
                                                                                                                                              aCTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCAttt                                                                                                  >  1:224138/1‑239 (MQ=255)
                                                                                                                                              aCTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGA‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAACTACGGTTTCGTTTTCCTCCACCGGCCCAttt                                                                                                  >  2:606514/1‑239 (MQ=255)
                                                                                                                                               ctctTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGCCATCTTCTTTAATATCCAGTTGAGCGGAGGTTTTTTGCAAACCTCCCCCCTGGCTAAGGCCACGTACGGTTTCGATTTCCCCCACCGGCGCAttt                                                                                                  >  2:480150/1‑238 (MQ=255)
                                                                                                                                                   tGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGttt                                                                                                                         <  1:630188/211‑1 (MQ=255)
                                                                                                                                                   tGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGttt                                                                                                                         >  2:630188/1‑211 (MQ=255)
                                                                                                                                                   tGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAg                                                                                             >  1:208765/1‑239 (MQ=255)
                                                                                                                                                          aaCGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAACCCTACCGCATGGCTAAGGGCAGCTACGATTTCGTTTTCCCCCACCGGCGCCTTTTCCAGAACCacc                                                                                      >  2:181782/1‑237 (MQ=255)
                                                                                                                                                          aaCGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTtcctcctgcctcttatagacatctccgag                                                                                       >  1:567323/1‑215 (MQ=255)
                                                                                                                                                          aaCGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCa                                                                                        >  1:782110/1‑237 (MQ=255)
                                                                                                                                                                           tCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCAAGAACCAGCTGCGTCAGCGAACCGaa                                                                     >  1:833646/1‑239 (MQ=255)
                                                                                                                                                                               cTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATTTCCAGTTGAGCGCGCGTTATTGGCAAACCTACCCCAAGGCTAAGGGCCGCTCAGGGTTCGATTTCCTCCCCCGCCGCCTTTTCCAAAACCacatcgtccaccgaacccgaccc                                                                  >  2:7271/1‑216 (MQ=255)
                                                                                                                                                                               cTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCCGACCCCACTCCGTCCGCGTACCGAAtca                                                                  >  2:825975/1‑236 (MQ=255)
                                                                                                                                                                               cTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGcc                                                                 >  1:926578/1‑239 (MQ=255)
                                                                                                                                                                                         agCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGAt                                                                                                                     >  1:417934/1‑177 (MQ=255)
                                                                                                                                                                                          ggggctTAAACCTTATCCG‑G‑GTT‑CCGGCCGCCGGGCATTT‑TGTGATTGGTTTCA‑CGTTCTCCCCATGCCGCTTCTGCCACAATTCGCATTTTCGCCGTGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAACCCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCAc                                                       <  2:858125/236‑1 (MQ=255)
                                                                                                                                                                                          ggcgcgTAACCCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCTTGT‑TGTTAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCAc                                                       <  1:1052893/235‑1 (MQ=255)
                                                                                                                                                                                          gctgcgTAAACCGGGTTTG‑G‑CGT‑GGCGCTGCACGGATTGT‑TTTGAAGGGTTTCC‑CTTTCTCAGTATGCCTCTTGTGCCTCACTTCGGATTTTCGCCGGAACATCTTCTTTAATATCCAGTTGAGCGAGAGTTAGTGGCAAACGTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGTCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCAc                                                       <  2:355965/235‑1 (MQ=255)
                                                                                                                                                                                          gcggcgTAACCCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCAc                                                       <  1:544628/238‑1 (MQ=255)
                                                                                                                                                                                          gcctgtttccccTGTTCTG‑GTCGT‑CGC‑CCCCCAGGCATGT‑TTGTAATGGTTTCC‑CCTTCTGCCAAGTCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCCTTAATATCCAGTTGAGCGAGAGTTATTGGCTAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCAc                                                       <  2:193334/228‑1 (MQ=255)
                                                                                                                                                                                           cggcgTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCACCGTACCGAATGCCCCTTTTTCAcca                                                     >  1:422528/1‑238 (MQ=255)
                                                                                                                                                                                           cggcgTAAACCTGATCTG‑G‑CGT‑AGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGTGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCCGCTATGGTTTCGATTTCCGCCACCGGCGCATTTTCCCGAACAAGCTGCGTCAGAGCACCGAATGCCACTTTTTCAccc                                                     >  2:5654/1‑238 (MQ=255)
                                                                                                                                                                                                 aacccTGTTTTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGTTTTCC‑CCTTCTGCACATGCCGCTTCCGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGata                                                <  2:790365/235‑1 (MQ=255)
                                                                                                                                                                                                        aTCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGAt                                        >  1:982326/1‑239 (MQ=255)
                                                                                                                                                                                                        aTCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAACATCCAGTTGAGCGAGAGTTTTTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGGGATAATAGTGAt                                        >  1:9170/1‑239 (MQ=255)
                                                                                                                                                                                                          ttG‑G‑CGT‑CGCGCCGCAAGGCATGT‑TGTGAATGGTTTAC‑CCGTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATgc                                      <  1:1033968/238‑1 (MQ=255)
                                                                                                                                                                                                                     gcgcCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCCCTTTTTCACCGTGATAAAAATGAGGCGCGCCCgg                              >  2:650846/1‑239 (MQ=255)
                                                                                                                                                                                                                         ccccAGGCATGT‑TGGGAATGGTTTCC‑ACTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATa                          <  1:324076/237‑1 (MQ=255)
                                                                                                                                                                                                                             caacccttttttgcaatgTTTCACCCTTCTGACCTTGCCGTTTCTGACACACATCCTATTTTCGCCGGTACATCTTCTTTAATATCCAGTTGAGCGGGAGTTATTGGCAAACCGACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGTGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCGCCGTGATAATAGTGATGCGCGTCCGGGATAGc                        <  2:149485/222‑1 (MQ=255)
                                                                                                                                                                                                                               gtgatgttttagaTGGTTCCG‑CCTTCCGCCTATGCTGTTTCTGCCACAATTCGCATTTGCGCCGGGACATCTTCTTTAATATCCATTTGAGCGAGAGTTATTGGCAACCCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGt                     <  1:444218/227‑1 (MQ=255)
                                                                                                                                                                                                                                cATGT‑TGTGAATGGTTTCC‑ACTGCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGt                     <  1:887126/237‑1 (MQ=255)
                                                                                                                                                                                                                                cATGT‑TGGTAATGGTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGt                     <  1:823604/237‑1 (MQ=255)
                                                                                                                                                                                                                                 aTGT‑TGTGAATGGTTTCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCa                   <  1:181782/238‑1 (MQ=255)
                                                                                                                                                                                                                                  tgt‑tgtGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAgg                 <  1:655508/239‑1 (MQ=255)
                                                                                                                                                                                                                                   ttttgttatttgTTTCC‑CCTTTTGCAGATGCCGTTTTTGACAGAATTCGGATTTTCTCCGGGACATCTTCTTTAATGTCCAGTTGAGCGATAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGGTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAgg                 <  2:290186/228‑1 (MQ=255)
                                                                                                                                                                                                                                   tttggttaaTTGTTTCC‑CCTTCTGCACATGCCGTTTCTGCCACAATTCGCATTGTCGCCGGGACATCGTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTACGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAgg                 <  2:909541/232‑1 (MQ=255)
                                                                                                                                                                                                                                           aTGGTTTCC‑CCTTCGGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAGGCCGTTATg         <  1:864648/239‑1 (MQ=255)
                                                                                                                                                                                                                                                ttCC‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAGGCCGTTATGCACt     <  1:330390/238‑1 (MQ=255)
                                                                                                                                                                                                                                                  cA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCCGCGTACCGAATGCCACTTTTTCACCGTGATTATAGTGATGCGCGTCCGGGCTAGCGGCTAGCCCGTTATCCACtgct  >  1:695141/1‑238 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                              
AGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGC‑AGAGATTGCGTAGGCCTGAT‑AAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTG‑G‑CGT‑CGCGCCGCCAGGCATGT‑TGTGAATGGTTTCA‑CCTTCTGCACATGCCGCTTCTGCCACAATTCGCATTTTCGCCGGGACATCTTCTTTAATATCCAGTTGAGCGAGAGTTATTGGCAAACCTACCGCATGGCTAAGGGCAGCTACGGTTTCGATTTCCTCCACCGGCGCATTTTCCAGAACCAGCTGCGTCAGCGTACCGAATGCCACTTTTTCACCGTGATAATAGTGATGCGCGTCCGGGATAGCGGTCAGGCCGTTATGCACTGCG  >  NC_000913/4137799‑4138273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A