Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I0 R1 92 125.0 2504412 98.2% 2459332 226.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,237,260 T→C 21.0% V122A (GTC→GCC)  yjbG → extracellular polysaccharide export OMA protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,237,2600TC21.0% 179.0 / 5.5 79V122A (GTC→GCC) yjbGextracellular polysaccharide export OMA protein
Reads supporting (aligned to +/- strand):  ref base T (44/16);  new base C (2/17);  total (46/33)
Fisher's exact test for biased strand distribution p-value = 1.42e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATCGATCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGTGGCTTA  >  NC_000913/4237025‑4237497
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             
aTCGATCTGGTAGGCCAGCCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCCGCATTGCGTCAGCAGCAGGCG‑TGGCTGTCACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCcg                                                                                                                                                                                                                                            <  1:410333/239‑1 (MQ=255)
  cgctCTGGTAGGCGAGCCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCcgcg                                                                                                                                                                                                                                          <  2:41427/236‑1 (MQ=255)
    aTCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACTGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGCTGCCGCCGCGATTAACGCCTTACGCCAGCAACTTCAGGCGCTGCAAGGGACGGGCCGGTAAAAAATCAATCTTGATCCCGATATCGCCCGCGtt                                                                                                                                                                                                                                        >  2:791821/1‑239 (MQ=255)
    aTCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGtt                                                                                                                                                                                                                                        >  2:955246/1‑239 (MQ=255)
    aTCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCCATATCGTCCGCGtt                                                                                                                                                                                                                                        >  1:76045/1‑239 (MQ=255)
    aTCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTAGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCCACGATGCCGCCGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGCCCGCGt                                                                                                                                                                                                                                         >  1:821681/1‑238 (MQ=255)
     tCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGtt                                                                                                                                                                                                                                        >  1:353379/1‑238 (MQ=255)
              ccAACCGCGGCGGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAAcg                                                                                                                                                                                                                                <  1:945078/237‑1 (MQ=255)
               cAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCgg                                                                                                                                                                                                                             >  1:1055361/1‑239 (MQ=255)
               cAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCgg                                                                                                                                                                                                                             >  2:1218065/1‑239 (MQ=255)
                 aCCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCGGCACGCGGTa                                                                                                                                                                                                                           >  2:671617/1‑239 (MQ=255)
                   cgcgGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTaa                                                                                                                                                                                                                          >  1:334751/1‑238 (MQ=255)
                             aaatggcggggggCCGGGGGGGGTAATTGGCGAGGAGGTGGAAAC‑GGGGGCAGATTTGCGACAG‑AGGAGGGGTTTGCTGACGGGGCGGGAAGAACGGGGCGCAGTTTCCA‑GCGCGGAGGATGCCGCGGCGATAAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGAGGGGCAGGAAAAAAATCAATCTTGTTCCCGATACCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTg                                                                                                                                                                                                                <  2:1174662/227‑1 (MQ=255)
                               cgggcggggggCCGGGGGCGGTGATTGGCGAAGAGCGGGCAAC‑GGCGGCAGCATGGCGTAAGCGGCGGGCG‑TTGCTGACACGGCGGGAAGAACAGGGCGCAGATCCCA‑GCGCGGACGATGCCGCGGCGATTAACGCCTTCCGCCAGCAAATCCGGGCGTTGAAAGGGAGGGGCAGGCAAAAAATCAATCTTGACCCCAATATCGCCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAg                                                                                                                                                                                                             <  2:1069725/230‑1 (MQ=255)
                                        ggCCCGGGGGGGTGATTGGGGAAGGGCGGGAAAC‑GGGGGCAGCATTGCGTCAGCAGCGGGGG‑TTGGGGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGAGGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTGGACCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTa                                                                                                                                                                                                     <  2:560983/238‑1 (MQ=255)
                                          ccggggggggttATTAGCG‑AGAGGCGGCGACGGGGGGCAGGATTGCGGCGGCGGCGGGGG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATCCCA‑GCGCGGACGATGCCGGTGAGATTAACGCCTTACGCAAGAAAATGCAGGCGTTGAAAGGGACGGGCAGGAAAAAAATCAATCTGGACCCCGATATCGCCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTaca                                                                                                                                                                                                   <  2:208362/230‑1 (MQ=255)
                                          cccGGTGGGGTAATTAGCGAAGGGCGGGCAGG‑GGCGGGAGCATTGCGTCAGCAGCGGGCG‑TTGCTGACACGGGGGGCAGAACGGGGCGCAGATCCCG‑GGGCAGACGAGGCCGCTGCGATTAACGCCTTACGCCAGAAAATTCAGGCGTGAAAGGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTGGCCGAACGGGGTAACCCGCCGTTGCAGGGCAACTaca                                                                                                                                                                                                   <  2:54267/238‑1 (MQ=255)
                                           ccGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTacac                                                                                                                                                                                                  >  1:35546/1‑238 (MQ=255)
                                           ccGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTacac                                                                                                                                                                                                  >  2:1122117/1‑238 (MQ=255)
                                             ggtgcggtgATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTacac                                                                                                                                                                                                  >  1:802151/1‑236 (MQ=255)
                                                gcggtgATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGGGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGAGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCtgtg                                                                                                                                                                                            >  2:146572/1‑239 (MQ=255)
                                                         aGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGCCAACTACACGCTGTGGGTCGGacc                                                                                                                                                                                   >  1:932483/1‑239 (MQ=255)
                                                         aGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGGAACCCGCCGTTGCCGGGCAACTACACGCTGTGGGTCGGacc                                                                                                                                                                                   >  1:742253/1‑239 (MQ=255)
                                                         aGCGAAGAGCTGGCAAC‑GGCGGCAGCATTACGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGACTTACGCCAGCAAATTCAGGCGTTGCAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGacc                                                                                                                                                                                   >  1:254046/1‑239 (MQ=255)
                                                           ggAAGAGATGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGCAAGGGCTGGCAAAACAGGGCGAAGATCCCG‑GCGCCGAGGAGGCCGCTGCGATTAACGCCTTACCCCAACAAATCCGGGGGTTGAAAGTGACGGGCAGGAAAAAAACCAATCTTGATCCCGATATCGCCCGCGTTGCCGAACGCGGTACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGacca                                                                                                                                                                                  <  2:1167602/237‑1 (MQ=255)
                                                              agagCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCAccg                                                                                                                                                                               >  1:1187249/1‑238 (MQ=255)
                                                                ggcgggaacc‑ggcggCAGCGGTGCGTCGGCGGCAGGCG‑TTGCGAACACGGCTGGAAGAACAGGGCGAAGATCCCA‑GCGCCGAGGAGGCCGCTGCGATTACCGCCTTCCGCCAGAAAATTCAGGCGTTGAAAGTGCGGGGCAGGAAAAAAATCAATCTTGACCCCGATACCGCCCGCGTGGCCGACCGCGGAACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCAccgc                                                                                                                                                                              <  2:35546/228‑1 (MQ=255)
                                                                agCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCAccgccg                                                                                                                                                                            >  1:1230408/1‑239 (MQ=255)
                                                                agCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGCTGCCGAACGCGGTAACCCGCCTTTGCAGGGCAACTACACGCTGTGGGTCGGCCCAccccc                                                                                                                                                                             >  2:1035036/1‑238 (MQ=255)
                                                                           ggcggcAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCCGCAAATTCAGGCGTTGCAAGTGACGGGGAGGCAAAAAATCCATCTTGATCCCGATATCGTCCGCGTTGCCGAACCCGGGAACCCGCCGTTGCAGGGCAACTCCACGCTGTGGGCCCGACCCCCACCGTCCACggcc                                                                                                                                                                   >  2:965857/1‑236 (MQ=255)
                                                                             cggcAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGCTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACg                                                                                                                                                                >  1:1044438/1‑239 (MQ=255)
                                                                                    aTTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCGGCGATTAACGCCTTACGCCAGAAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATACCGTCCGCGTTGCCGAACGCGGTACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACgttgtt                                                                                                                                                           <  1:108000/237‑1 (MQ=255)
                                                                                             gcagcagGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCa                                                                                                                                                >  2:726510/1‑239 (MQ=255)
                                                                                             gcagcagGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGAAGGGCAACTACACGATGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCa                                                                                                                                                >  2:134/1‑239 (MQ=255)
                                                                                               agcagGGT‑TTGCTGACACGGCTGGGAGAACAGGGCGCAGATTCCA‑GCGCCGACGAGGCCGCTGCGATTAACGCCTTACGCCAGAAAATTCAGGCGTGAAAAGTGACGGGAAGGAAAAAAATCAATCTTGACCCCGATTTCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAg                                                                                                                                               <  1:686782/238‑1 (MQ=255)
                                                                                                            tGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAag                                                                                                                                  <  1:621066/239‑1 (MQ=255)
                                                                                                              acagGGCTGGAAGACAGGGGCGCAAATCCCA‑GCGCGGAGGATGCCGCTGCAATAACCGCCTTACGCCAGAAAATTCGGGCGTGAAAAGGGACGGGAAGGAAAAAAACCAATCTGGACCCCGATATCGCCCGGGTTGCCGACCGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAagca                                                                                                                                <  2:347439/239‑1 (MQ=255)
                                                                                                                gcggggggaagaagaGGGCGCA‑ACTCCAGGCGCCGGCGGTGCCGTGGCGATTAAGACCTTCCGCCAGCAAATTCAGGCGTGGAAGGTGCGGGGCAGGCAAAAAATCAACCTGGACCCCGATATCGTCCGCGTGGCGGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAagcag                                                                                                                               <  2:382944/229‑1 (MQ=255)
                                                                                                                 cGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGcc                                                                                                                             >  2:73308/1‑239 (MQ=255)
                                                                                                                     tgccaaaaCAGGCCGCAATTCCCA‑GCGCCGACGAGGCCGCGGCGATAAACGCCTTCCGCAAGAAATTCCGGGCGTGGAAAGGGAGGGGCGGGAAAAAAACCACTCTTGACCCCGATACCGCCCGGGTGGCCGACCGCGGAACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCAtt                                                                                                                          <  2:110893/232‑1 (MQ=255)
                                                                                                                     tGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAACCAGCCATTc                                                                                                                         >  1:851799/1‑239 (MQ=255)
                                                                                                                                ggCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGt                                                                                                                >  1:110893/1‑237 (MQ=255)
                                                                                                                                ggCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGGGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTcg                                                                                                              >  2:1010252/1‑239 (MQ=255)
                                                                                                                                  cgcAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTcgcg                                                                                                            >  2:1238289/1‑239 (MQ=255)
                                                                                                                                  cgcAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTcgcg                                                                                                            >  2:344155/1‑239 (MQ=255)
                                                                                                                                     aGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACg                                                                                                         >  1:389489/1‑239 (MQ=255)
                                                                                                                                        tcccA‑GCCCCGAGTATGCCCGTGCGATTCACCCCTTACGCCGGCAAATCCGGGCGTTAAAAGGGACGGGCAGCAAAAAAATAAATCTTGATCCCGATATCGCCGGCGTTGCCGAACGCGGTACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTgg                                                                                                      <  2:1041343/237‑1 (MQ=255)
                                                                                                                                         tcccggccccGACGATGCCGCTGCGATTACCGCCTTCCGCCAGAAAATTCAGGCGTTGAAAGTGACGGGCAGGAAAAAAATCAATCTTGATCCGGATATCGCCGGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGt                                                                                                        <  1:163927/229‑1 (MQ=255)
                                                                                                                                                    acgaTGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCCGCCATTCACTCCAGGTCGCGACGTGGCGAGCTAtcc                                                                                            >  2:1118025/1‑237 (MQ=255)
                                                                                                                                                     cgaTGCCGCGGCGATAAACGCCTTACCCAAGCAAATTCAGGCGTAGAAAGTGACGGGAAGGAAAAAAATCAATCTTGATCCCGATACCGCCCGCGTTGCCGAACGCGGTACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTAtctct                                                                                          <  1:955246/239‑1 (MQ=255)
                                                                                                                                                           cGCTGCGATTAACGCCTTACGCCAGAAAATTCAGGGGTTGAAAGGGACGGGCAGGAAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGAcc                                                                                    <  1:1122303/239‑1 (MQ=255)
                                                                                                                                                              tccGATTAGCGCCTTACCCGAGAAAATTGAGGGGTGGAAAGGGACGGGCAGGAAAAAAAACAATCTTGCCCCCGATACCTCCCGCGTTGCCAAGCGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCaga                                                                                 <  2:1055361/237‑1 (MQ=255)
                                                                                                                                                              tGCGATAAACGCCTGACGCCGGAAAATTCAGCGGTGGAAAGGGACGGGCAGGCAAAAAATCAACCTTGACCCCGATATCTTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCag                                                                                  <  1:671617/238‑1 (MQ=255)
                                                                                                                                                              ggcaataaaCGCTTTACGCCACAAAATGCGGGCGTTAAACGGGACGGGCAGGAAAAAAATCAATCTTGACCCCGATCTCGTCCGCGTGGCCGAGCGGGGCACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCaga                                                                                 <  2:517099/232‑1 (MQ=255)
                                                                                                                                                                        gcttcaCGCCAGAAAATCCGGGGGTTGAAGGTGACGGGCAGGAAAAAAATCAATCTTGATCCCGATCTCGCCCGCTTTGCCGACCGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAg                                                                       <  2:334751/234‑1 (MQ=255)
                                                                                                                                                                        gCCTCACGCCAGAAAATTCAGGGGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGACCCCGATATCGTCCGCGTTGCGGAACGCGGTACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAg                                                                       <  1:1212773/239‑1 (MQ=255)
                                                                                                                                                                            tACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGt                                                                   >  1:1165277/1‑239 (MQ=255)
                                                                                                                                                                            tACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGt                                                                   >  1:763127/1‑239 (MQ=255)
                                                                                                                                                                            tACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGt                                                                   >  1:521873/1‑239 (MQ=255)
                                                                                                                                                                             aCGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGt                                                                   >  1:1184619/1‑238 (MQ=255)
                                                                                                                                                                               gccacaaaaTTCAGGCGTTGAAAGTGCCGGGCAGGCAAAAAATCAATCTTGACCCCGATACCGCCCGCGTGGCCGACCGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCg                                                                <  1:650104/233‑1 (MQ=255)
                                                                                                                                                                                 cAGAAAATCCAGGCGTTGAAAGTGAGGGGCAGGCAAAAAACCAATCTTGACCCCGATATCGCCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAg                                                                                                                                                                                                             <  2:557788/96‑1 (MQ=255)
                                                                                                                                                                                    cAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATc                                                            >  2:171413/1‑238 (MQ=255)
                                                                                                                                                                                       aTTCGGGGGTGGAAAGTGAGGGGAAGCAAAAAAACCAATCTGGCCCCCGTTTCCGCCGGGGTGGCCGACGGCGGTACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAg                                                        <  2:1230408/239‑1 (MQ=255)
                                                                                                                                                                                           aGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTaca                                                                                                                                                                                                   >  1:557788/1‑96 (MQ=255)
                                                                                                                                                                                             gCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTAcgc                                                  >  1:207826/1‑239 (MQ=255)
                                                                                                                                                                                                       tGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGtt                                        >  1:502316/1‑239 (MQ=255)
                                                                                                                                                                                                          cGGGCAGGAAAAAAATCAATCTTGACCCCGATATCGCCCGGGTTGCCGACCGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTAc                                     <  1:484444/239‑1 (MQ=255)
                                                                                                                                                                                                              caggcaACAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACTCTGGGGGTCGGACCCCCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGGCCTGGCAAGCAGCCATTCACTCCCGGTCGCGACGTGGCGAGCTATCTCTCTGACCCGAGCATGCCCAGCGGTGCCGATCGCAGCTGCGCGCCAGTGGATTAACcg                                  >  2:1204842/1‑238 (MQ=255)
                                                                                                                                                                                                                     aaaaCCAATCTTGACCCCGTTATCGCCCGCGTGCCCGACCGCGTAACCCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGgacggacg                          <  2:1067448/239‑1 (MQ=255)
                                                                                                                                                                                                                        atcactgtgtccccagATATCGCCCGCGTTGCCGCGCGGGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGacgcac                       <  2:353379/224‑1 (MQ=255)
                                                                                                                                                                                                                           aatcTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGAcgcacgca                    >  2:430528/1‑239 (MQ=255)
                                                                                                                                                                                                                           aatcTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGAcgcacgca                    >  2:783718/1‑239 (MQ=255)
                                                                                                                                                                                                                           aatcTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTAGGACCACCGCCGTCCACGGTCACg                                                                                                                                                                >  1:100116/1‑99 (MQ=255)
                                                                                                                                                                                                                                  aTCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAgc              >  2:589316/1‑238 (MQ=255)
                                                                                                                                                                                                                                       gATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGt        >  1:452388/1‑239 (MQ=255)
                                                                                                                                                                                                                                       gATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGt        <  1:783718/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tatCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGTgg      <  1:73308/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tatCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGTg       >  2:9115/1‑238 (MQ=255)
                                                                                                                                                                                                                                              tCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGGGGTTTACCCGGACGGACGCAAGCAAAAAGCGCGGGGGGCTTa  >  2:1134696/1‑238 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             
ATCGATCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAAC‑GGCGGCAGCATTGCGTCAGCAGCAGGCG‑TTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCA‑GCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGTGGCTTA  >  NC_000913/4237025‑4237497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A