Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F9 I0 R1 80 116.8 2384848 97.0% 2313302 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,145,064 A→C 12.7% L357F (TTA→TTC)  pflD → putative glycine radical domain‑containing pyruvate formate‑lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,145,0640AC12.7% 350.4 / 4.5 135L357F (TTA→TTC) pflDputative glycine radical domain‑containing pyruvate formate‑lyase
Reads supporting (aligned to +/- strand):  ref base A (69/43);  new base C (2/21);  total (71/64)
Fisher's exact test for biased strand distribution p-value = 3.61e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 135 total aligned reads displayed.

CTATCAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCATGACATCGCG  >  NC_000913/4144830‑4145298
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
cTATCAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGCTCCTTTGCCTTGACGCCTATCAACGCGTG‑CAATTCCCg                                                                                                                                                                                                                                           >  1:255279/1‑238 (MQ=255)
    cAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑Acc                                                                                                                                                                                                                                     <  2:168194/239‑1 (MQ=255)
    cAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑Acc                                                                                                                                                                                                                                     <  2:23404/239‑1 (MQ=255)
     aGACATCATTAACCCAGGGCGAAGATGCGGCGTTGCTGAAACAACTGCGCGCATCTTTATGTGTGAAATGCAACGACGTCGTGCTGTTGCGATCCAGCAGTAGCTCGCGTGATTTCGCCGGTTTCCCGACCGGCTATACCGCGCTGCTCGGCGGGTTAACCGATAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑Acc                                                                                                                                                                                                                                     <  1:454694/238‑1 (MQ=255)
         atcatTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑cc                                                                                                                                                                                                                               <  2:1082109/239‑1 (MQ=255)
           catTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTc                                                                                                                                                                                                                             <  1:484716/239‑1 (MQ=255)
           catTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGACGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTCACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCACAGCGTG‑CACTTACCGCA‑ACCGAA‑CCTc                                                                                                                                                                                                                             >  2:204302/1‑239 (MQ=255)
             ttAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCg                                                                                                                                                                                                                            >  2:754896/1‑238 (MQ=255)
                 cccAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGt                                                                                                                                                                                                                        >  1:202072/1‑238 (MQ=255)
                 cccAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTg                                                                                                                                                                                                                       <  1:978629/239‑1 (MQ=255)
                   cAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTgcg                                                                                                                                                                                                                     <  2:393114/239‑1 (MQ=255)
                     gggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTc                                                                                                                                                                                                                             <  2:1099387/229‑1 (MQ=255)
                     gggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTc                                                                                                                                                                                                                             >  1:1099387/1‑229 (MQ=255)
                     gggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTgcgc                                                                                                                                                                                                                    >  2:74724/1‑238 (MQ=255)
                     gggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTgcgc                                                                                                                                                                                                                    >  2:631882/1‑238 (MQ=255)
                     gggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTgcgc                                                                                                                                                                                                                    >  2:523638/1‑238 (MQ=255)
                     gggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCCCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTgcgc                                                                                                                                                                                                                    >  2:881127/1‑238 (MQ=255)
                      ggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTgcgc                                                                                                                                                                                                                    >  2:613643/1‑237 (MQ=255)
                      ggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGGgcgc                                                                                                                                                                                                                    >  2:1043372/1‑237 (MQ=255)
                      ggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGCGCGCa                                                                                                                                                                                                                   >  2:1018467/1‑238 (MQ=255)
                      ggCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGGGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTTTCAAAGCGTG‑CAATTCACGCA‑ACCGAA‑CCTCGGCGtcggc                                                                                                                                                                                                                    >  2:31001/1‑233 (MQ=255)
                        cgacgaTGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGCCAACGTGTTGTTGCGCCCCACCAGTAGCGCGCGTTAGTTCGCCCGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGCTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACt                                                                                                                                                                                                                 <  1:921063/238‑1 (MQ=255)
                        cGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACt                                                                                                                                                                                                                 <  2:41929/238‑1 (MQ=255)
                        cGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACt                                                                                                                                                                                                                 <  1:1172214/238‑1 (MQ=255)
                        cGAAGATGCGGCGTTCCTGAAAAAACTGCTGGAATCTTTATGGTTGAAATGCAACGACATCGTGCTCTTGCGTTCCCCCAGTTGCGTGCGTTACTTCGCCGGTTTCCCGACCGGCTCTACCGTACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCAGTGAACGTGCTTTCGTTCCTTTGCCTTGACGGCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCACGGCGGGCGCACt                                                                                                                                                                                                                 <  1:531752/238‑1 (MQ=255)
                        cGAAGATGCGGCGATCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCGCCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACt                                                                                                                                                                                                                 <  2:294118/238‑1 (MQ=255)
                           aGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAAc                                                                                                                                                                                                              >  2:333486/1‑238 (MQ=255)
                           aGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAAc                                                                                                                                                                                                              >  2:276857/1‑238 (MQ=255)
                           aGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCCGCGGCACTAAc                                                                                                                                                                                                              >  1:590899/1‑238 (MQ=255)
                           aGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGGGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGCA‑CCTCGGCGGGCGCCCTAAc                                                                                                                                                                                                              >  1:468615/1‑238 (MQ=255)
                                       ccTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGaca                                                                                                                                                                                                 <  2:196574/239‑1 (MQ=255)
                                                         aTCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGaaa                                                                                                                                                                                >  2:968854/1‑238 (MQ=255)
                                                              tATGGGTGAAATGCAACGACATCGCGCCGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATAACGCACTGCTCGGCGGGTTAACCGTGAACGGTTGTATCGTGGTGAACTCGCTTTCGTTCCTTCGTCTTTACGCCACTCATATCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCCCACTAACGCCTTGATCGTACCGCCAGTCCCGGTGAAAAccccc                                                                                                                                                                          >  1:151020/1‑239 (MQ=255)
                                                                     gAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGCCACGCCGTTCCTGATGAAAACCGCCGAAACCa                                                                                                                                                                   >  1:62305/1‑239 (MQ=255)
                                                                       aaTGCACCGCCATCGGTCGTTTGCGCTCCACCAGGAGCGCGCGTTATTGCGCCGGTTTCCCGACCGGCTATCCCGCACGGCTCGGCGGGTTACCCGAGAACGGACGTGGCGCGGGGAACGTGTTTTCTTTCCTTTGCCTTGCCGCCTATCAAAGCGTG‑CAATTCCCGCA‑ACCGAC‑CCTGGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCAtt                                                                                                                                                                 <  1:1161198/239‑1 (MQ=255)
                                                                               gagaTCGTGCTGTTGCGCTCCCCCAGGCGCGCGCGTTATTTCCCGGGTTCCCCGCCCGTCTATCCCGCCGTGCGCGGCGGTTTAACCGAGAACGGACGTGGCGCGGTGAACGGGCTTTCGTTCCTTTCCCTTGACGCCTATCAAAGCGTG‑CATTTCCCGCA‑ACCGAC‑CCTCGGCGGGCGCACTACCGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCtt                                                                                                                                                            <  1:385697/233‑1 (MQ=255)
                                                                                        cTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTAt                                                                                                                                                >  2:1079682/1‑239 (MQ=255)
                                                                                         tGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑AACGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGCAAACCACCGAAACCCTTCGCTTCGGTACCGGTAt                                                                                                                                                >  2:698706/1‑238 (MQ=255)
                                                                                           ttGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTa                                                                                                                                                                                                                <  1:1040187/172‑1 (MQ=255)
                                                                                           ttGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTa                                                                                                                                                                                                                >  2:1040187/1‑172 (MQ=255)
                                                                                                cTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCa‑a                                                                                                                                                                                                                                       >  1:326153/1‑145 (MQ=255)
                                                                                                cTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCa‑a                                                                                                                                                                                                                                       <  2:326153/145‑1 (MQ=255)
                                                                                                cTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGCTCGACACGCCGCTCCTGATGAAAACCGCCCAAACCATTCCCTTCGGTACCGGGATTCCGCaaa                                                                                                                                        >  1:628074/1‑239 (MQ=255)
                                                                                                cTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGAAGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCaaa                                                                                                                                        >  2:169837/1‑239 (MQ=255)
                                                                                                    cccatgaccgcgcgTTTTTTCGCCTTTGCCCCGACCGTCTGTCCCCCTCGGCTCGGCGGTTTACCCGAAACCGGCCGTAGCGCGGTCACCGTGCTTTCGTTCTTTGGCCTTGACGCTTATCAATGCTTG‑CAATTACCCCA‑CCCGAA‑CCTCGGCGTGCGCACTACCGCCTTTATCGACACGCCGTTCCTGATGAAAGCCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCtt                                                                                                                                    <  1:359262/231‑1 (MQ=255)
                                                                                                        gTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAAACGCCGAAACCATTCGCTTCGGTACCGGCATTCCGCCAATCTTTAAc                                                                                                                                >  1:785300/1‑239 (MQ=255)
                                                                                                             gcgcgTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGa                                                                                                                           >  2:1058887/1‑239 (MQ=255)
                                                                                                              gcgtgttttccGCCTGTTACCGGCCCGGTTAGCCCGCACGCCTAGGCGGTTTAACCGTGAACGGACTTAGCTCGGGGAACTTGCTGTCGTCCCTTCGCTTTGACTCCTACCAAGGCGGG‑CATTTACCGCA‑ACCGAG‑CCTCGCCGGCCCCACTAACTCCTTGAGCGACACGCCGTTCCTAATGAAAACCGCCGAAACCATTCGCTTCTGTACCGGTATTCCGCAAATCTTTAACGATGaa                                                                                                                          <  1:925138/229‑1 (MQ=255)
                                                                                                                cgTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGCGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTTAAGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGCGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGGAAACCGCCCAAACCATTCGCTTCGGTACCGGGATTCCGCCAATCTTTAACGCTGAAgt                                                                                                                        >  1:576389/1‑239 (MQ=255)
                                                                                                                cgTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGGCACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAgt                                                                                                                        >  1:1152482/1‑239 (MQ=255)
                                                                                                                  tttttccGCCGGTTTCCCGACCGGCTATACCGCATTGCTCGGCGGGTAAACCGAGAACGGCCGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGCCGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCCCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAgtgg                                                                                                                      <  1:631882/233‑1 (MQ=255)
                                                                                                                   tATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAgtggt                                                                                                                     >  2:544262/1‑239 (MQ=255)
                                                                                                                      ttCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACCCGCCGTTCCTGCTGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAAAGATTAAgggggggt                                                                                                                  >  1:575504/1‑239 (MQ=255)
                                                                                                                        cGCCGTTTTCCCGACCGGCTATCCCGCCCTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGc                                                                                                                <  1:74724/239‑1 (MQ=255)
                                                                                                                        cGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAgtggtggtg                                                                                                                 >  2:626680/1‑238 (MQ=255)
                                                                                                                           cGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGTTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGAGCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAg                                                                                                             <  2:1157091/239‑1 (MQ=255)
                                                                                                                              tttCCTGCCCGGTTAGCCCGCCCTCCTCGGCGGGTTAACCAAGAACGGAGGTGGCGCGGTGAACGTGCTTTCGTTCTTTTGCCTGGACGCCTACAAACGCGTG‑CAATTACCCCA‑CCCGAA‑CCGGGGCGGGCGAGCTAACCCTTTGATAGACCCGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCg                                                                                                           <  1:185865/238‑1 (MQ=255)
                                                                                                                               ttCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGGGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTCTTCCGCAAATCTTTAACGATGAGATGGAGGTGCCAGCGt                                                                                                          >  2:98557/1‑238 (MQ=255)
                                                                                                                                                  cACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGttc                                                                                        >  2:780687/1‑236 (MQ=255)
                                                                                                                                                  cACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTc                                                                                       >  2:71797/1‑238 (MQ=255)
                                                                                                                                                    ctccTCGGCGGGTTAACCGAAAACGGCCGTAGCGCGGTGAACGCGCTTTCGTTCCTATGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTACCGCCTTGATCGACCCCCCGTGCCTGATGAAAACCGCCGGAACCAATCGCTTCGTTACCGGTATTCCGCAAATCTTTAACGCTGAAGTGGAGGAGCCAACGTTCCTCAACCGAGGCGTTTTGca                                                                                    >  1:169923/4‑238 (MQ=255)
                                                                                                                                                    cTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTc                                                                                       >  2:341800/1‑236 (MQ=255)
                                                                                                                                                       cTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCCACCGTGGCGTTTCGCTGGa                                                                                 >  1:633493/1‑239 (MQ=255)
                                                                                                                                                       cTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGGGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGa                                                                                 >  2:921910/1‑239 (MQ=255)
                                                                                                                                                       cTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGCGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGa                                                                                 >  2:211589/1‑239 (MQ=255)
                                                                                                                                                       cTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGAGGTGGTGCCAGCGTTCCTCAACCGCGGCGTTTCGCTGGa                                                                                 >  2:1058733/1‑239 (MQ=255)
                                                                                                                                                       cTCGGCGGCATAACCGAGAACGGACGTAGCGCGGTGAACGGGGTTTCGTTCCTTTGCCTTGACGCCTATCAAAACGCG‑CAATTACCGCA‑GCCGAA‑CCTCATCGGGCGCACTAACGCCTTGAGCGACACGCCGTTCCCGCTGAAAACCGCCGGAACCATTTCCTCCCGTACCCGGATGCCGCAAATCTTTAACCGTGAAGTGGGTGGGCACGCGATCCTCactcggtgggcgtgcggtgt                                                                                 >  1:663412/1‑220 (MQ=255)
                                                                                                                                                                   cccGAGAACGGACGTAGGGGGGTGAACGTGTTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTCCCGCA‑CCCGAC‑CCTTGGCGTGCGCCCTAACGCCTTGATCGCCACGCCGTTCCTGATAAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGa                                                                     <  2:628074/238‑1 (MQ=255)
                                                                                                                                                                   cccGAGAACGGACGTAGCGCGGTGAACGTGCTTCCGTTCTTTTCCCTGGCCGCCTAACAAAGCGTG‑AAATTCCCGCA‑CCCGAA‑CCTCGGCGTGCGCACTACCGCTTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGa                                                                     <  1:697644/238‑1 (MQ=255)
                                                                                                                                                                   acggagaACGGACGTAGGGCGTTGAAGGTGCTTTCGTTCCTTTGCCTTGACCCCTATCAAAGCTTG‑CAATTCCCGAA‑ACCGAA‑CCGCGGCGGGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGa                                                                     <  1:1053301/236‑1 (MQ=255)
                                                                                                                                                                   accgcaaccggagtgcgcgcGGTGAACGGGCTTCCGTACCTTTCCGTGGCCGCACATAAAAGCTTA‑AAATTCCGCCA‑ACCGAA‑CCTGGGCGTGCGCACAACCGCCTTAATCGCCCCGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTGTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGa                                                                     <  1:968854/223‑1 (MQ=255)
                                                                                                                                                                   aCCGAGAACGGACGTAGCGCGGGGAACGTTCTTTCGTCCCTTTGCCTGGACGCCTATCAAAGCGTG‑CAATTCCCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGAGGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGa                                                                     <  1:109507/239‑1 (MQ=255)
                                                                                                                                                                         cgcggagagagggtggTGAGCGTGCTCTCTGTCCTTTGTGATGACGCCCATAAAAG‑GTGTCAATTAACGCC‑ACCGAT‑CCACGGGGTCCCATGTACCGCTTTGTTCGACACGCGGTTCCTTATGAAAACCGCCGAAACCATTCGGTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTAtt                                                                <  1:991953/224‑1 (MQ=255)
                                                                                                                                                                          aCGGACGTGGGGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTAtt                                                                <  2:438697/237‑1 (MQ=255)
                                                                                                                                                                          aCGGACGTAGCGCGGTGAACGTGCTTTCGTTCTTTTGCCTTGCCGCCTATCAAAGCGTG‑CAATTCCCGCA‑ACCGAC‑CCTCGGCGTGCGCACTAACGCCTTGACCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTAtt                                                                <  2:583445/237‑1 (MQ=255)
                                                                                                                                                                                  ggcgcGGTGAACGTGCTTTCTTTCCTGTGCTCTACGGCTTACAAAAGCGTG‑AATTTCCCGCA‑ACCGAC‑CCTCGGCGTGCCCACTAGCCCCTGAACCAACCCGCCGTACCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTggg                                                      <  1:403511/238‑1 (MQ=255)
                                                                                                                                                                                  aGCGCGGTGAAGGTGCTTTCGTTCCTTTGCCTTGACGCCTACCAAAGCGTG‑CAATTACCGCA‑CCCAAC‑CCTCGGCGTGCGCACTAACGCCTTGATCGACCCGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTggg                                                      <  2:785300/239‑1 (MQ=255)
                                                                                                                                                                                   gcgcGGTGAGCTGTCTTTCGTTCCTTGGCCTTGACGCCTATAAAAGCGTC‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGCTCAGCACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTggg                                                      <  1:188251/238‑1 (MQ=255)
                                                                                                                                                                                       ggTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCtgtg                                                 <  2:202072/239‑1 (MQ=255)
                                                                                                                                                                                        gtaaccGTGTTTTCGTTCTGTGGCCTTAACGCCAAGAAAGGCGTG‑CTATCCCCGTA‑ACCGAG‑CCTCGGCGGGCACCCAATCGCTTTCATCGACACGCCATTCCTGATAAAAACCGCCGAAACCATTCTCTTCTGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTTGGCtgtg                                                 <  1:921993/233‑1 (MQ=255)
                                                                                                                                                                                        gTGACCGTGCTTTCTTTCCTTTGCCTTGACCCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCTTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCtgtg                                                 <  2:590899/238‑1 (MQ=255)
                                                                                                                                                                                        gTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCtgtgt                                                >  2:55735/1‑239 (MQ=255)
                                                                                                                                                                                        gTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCtgtg                                                 <  1:1103193/238‑1 (MQ=255)
                                                                                                                                                                                           aaCGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGa                                             >  2:270746/1‑239 (MQ=255)
                                                                                                                                                                                           aaCGTGCTTTCGTTCCTTTGCCTTGACCCCTATCAAGGCGTG‑CAATTCCCGAA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCTTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGa                                             <  2:219370/239‑1 (MQ=255)
                                                                                                                                                                                           aaCGTGCTTCCGTTCCTTTGCCTTGACCCCTACAAAAGCGTG‑CAATTCCCGCA‑ACCGAC‑CCTCGGCGTGCGCACAAACGCTTTTATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGa                                             <  1:882525/239‑1 (MQ=255)
                                                                                                                                                                                            aCGTGTTTGCGTCCTTTTGCCTTGCCCCCTATAAAAGCGTG‑CAATTCCCGCA‑ACCGAA‑CCCGGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGa                                             <  1:1185855/238‑1 (MQ=255)
                                                                                                                                                                                             cggccTTTCGTTCGTTTGCTTTAGCGTGTATAAAAGGGTG‑AAATTACCGAC‑CCCGAC‑CCCGGCCGTGCCCCCTACCGCTTTTATCGACACTCCTTTCCTTATAAAATCCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGa                                             <  1:923551/233‑1 (MQ=255)
                                                                                                                                                                                                 cTTCCGTTCCTTTGCCGTGCCGCTAATCAACGCGTG‑CAATTCCCGAA‑CCGGAC‑CCTCGGCGTGCGCTTTATGGCCTTGATCGACACGCGGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTaa                                                                                                                                 <  1:751007/149‑1 (MQ=255)
                                                                                                                                                                                                   ttCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTCGTGGGCTTTGTGGATGTATCTa                                     >  1:758636/1‑239 (MQ=255)
                                                                                                                                                                                                              ccctgaaccccTACCAAAGCGTG‑CAATTACCCCA‑ACCAAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACCCGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGa                          <  2:151020/230‑1 (MQ=255)
                                                                                                                                                                                                                    aCGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTAc                    >  2:1061085/1‑239 (MQ=255)
                                                                                                                                                                                                                     ccccTATCAAGCCCGG‑CAATTACCGC‑‑ACCGAACCCTGGGCGTGCGCACTACCGCCTGGATCGCCACGCCGTTCCGGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACg                   <  1:270746/237‑1 (MQ=255)
                                                                                                                                                                                                                         tATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCtt               >  1:872063/1‑239 (MQ=255)
                                                                                                                                                                                                                         tATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGAAACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATGCCGCAAATCTTTTACAATAAGGGGGCGGTGCAAGCGGTACGCAACCGTGGCGTTTCGCTGGAAGCTGCGCGTGACAATTTCGGAGTGGTCTGTGTGGAATTTTCTATTCCCTGCAGAAACTACGGCta               >  1:1180268/1‑238 (MQ=255)
                                                                                                                                                                                                                              caaggggtgaaTTACCGCACACCGAG‑CCCTGCCGTGCCCACAAACGCCTGAATGGACCCGCCGTTCCGGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCa            <  1:1058887/230‑1 (MQ=255)
                                                                                                                                                                                                                                  gTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCTTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGc                                                                                                                                           <  2:396012/106‑1 (MQ=255)
                                                                                                                                                                                                                                  gTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGc                                                                                                                                           >  1:396012/1‑106 (MQ=255)
                                                                                                                                                                                                                                   tG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCATGACa       >  2:1125353/1‑237 (MQ=255)
                                                                                                                                                                                                                                    g‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCATGACATcg    <  2:872063/239‑1 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
CTATCAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTG‑CAATTACCGCA‑ACCGAA‑CCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCATGACATCGCG  >  NC_000913/4144830‑4145298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A