Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F9 I0 R1 80 116.8 2384848 97.0% 2313302 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,492,816 G→T 11.9% H179Q (CAC→CAA)  idnO ← 5‑keto‑D‑gluconate‑5‑reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,492,8160GT11.9% 362.3 / 3.7 122H179Q (CAC→CAA) idnO5‑keto‑D‑gluconate‑5‑reductase
Reads supporting (aligned to +/- strand):  ref base G (38/67);  new base T (15/2);  total (53/69)
Fisher's exact test for biased strand distribution p-value = 8.45e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 125 total aligned reads displayed.

GGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGAACTCAGTAAAAGGA  >  NC_000913/4492583‑4493053
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                              
ggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGGGGTGAAGGCCTCGGCCTCAACCCGCGCTTTTGTCATTTCTGTTTTGAAATAACCCGGCGCAATAACGCTGACCTCAATATTGTGgc                                                                                                                                                                                                                                            >  1:361313/1‑238 (MQ=255)
ggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGCAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGgc                                                                                                                                                                                                                                            >  2:830408/1‑238 (MQ=255)
ggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGGAGGCTTCGTCCCTAACCCGTGCTTTAGTCCTTTCTGTTTTTAAATAGGCCGGCGCAATACCCTTTACCTGAATATTTTGgc                                                                                                                                                                                                                                            >  2:1007135/1‑238 (MQ=255)
  cTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCCCGGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGGGCAAAACCGGTGACCTGAATATTTTTgcgt                                                                                                                                                                                                                                          >  2:571135/1‑237 (MQ=255)
     ttAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCa                                                                                                                                                                                                                                     <  1:119890/239‑1 (MQ=255)
     ttAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGAAGGCCTCGGCCTCAACCAGTGCTTTAGGCCTTTTTGTTTTGTAAACGACCGGCGCACAACCGGTGACCTGAAATTTTTGGCGCG‑CCa                                                                                                                                                                                                                                     >  1:885295/1‑239 (MQ=255)
     tcaaaCAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGGTTCGTCCTCAACCAGGGCTTTAGTCATTTCTGTTTTGAAATAGCCCCGCGCCATACCGTTGACCTGAATATTGTGGCGCG‑ccc                                                                                                                                                                                                                                     >  2:1009488/3‑238 (MQ=255)
      tAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCa                                                                                                                                                                                                                                     <  1:352329/238‑1 (MQ=255)
               aCTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCCACCAGTGCTTTTGTCATTTCTGGTTTGAAATAGCCCGGCGCCATACCGTTGACCTGAATATTGTGGCGCG‑CCACGTCGACGc                                                                                                                                                                                                                            >  2:765787/1‑238 (MQ=255)
               aCTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCCACCAGGGCTTTTGTCATTTCTGTTTTTAAATAGCCCCGCGCCATACCGTTGACCTGAATATtgtgtgggcccaaccccgcgc                                                                                                                                                                                                                             >  1:954223/1‑221 (MQ=255)
               aCTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACGAGTGCTTTAGTCCTTTCTGTTTTTAAATAGCCCGGCGCCATACCGGTGGCCTGAATATTTTGGGGCG‑CCAGCTcgccgc                                                                                                                                                                                                                            >  1:1131338/1‑238 (MQ=255)
               aCTAACAGAGCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGca                                                                                                                                                                                                                           <  1:542676/239‑1 (MQ=255)
                       gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGGACAACCAGGCGGTGAAGGCCTCCTCCTCAAACAGTGCTTTAGTCATTTCTGGTTTTAAAAAGCTCGGCGCAATATCCTTGCACTGTATATTGTGgcggcgacaactaaggcaaacaccg                                                                                                                                                                                                                     >  1:999013/1‑216 (MQ=255)
                       gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCcgc                                                                                                                                                                                                                   >  2:84654/1‑239 (MQ=255)
                          gccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCggg                                                                                                                                                                                                                <  2:961846/239‑1 (MQ=255)
                                        acaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTAcc                                                                                                                                                                                                  <  1:584024/239‑1 (MQ=255)
                                               gCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGGCCCGGGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAACTCGCCGCCCATGCCGCGGGGGGGCCTTTTTTCCGccccct                                                                                                                                                                                           >  1:1098445/1‑237 (MQ=255)
                                                 cGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGGGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACCTGCCGCGGGTGAGCATTTTTTCCGCCCCctt                                                                                                                                                                                          >  2:436845/1‑238 (MQ=255)
                                                   tttACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGa                                                                                                                                                                                       >  2:1045176/1‑239 (MQ=255)
                                                      aCGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGc                                                                                                                                                                                    <  2:367100/239‑1 (MQ=255)
                                                      aCGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGc                                                                                                                                                                                    <  2:885295/239‑1 (MQ=255)
                                                          aaTCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCa                                                                                                                                                                                <  2:1145277/239‑1 (MQ=255)
                                                                             aaGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATGCCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTc                                                                                                                                                               <  1:648146/237‑1 (MQ=255)
                                                                             aaGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTc                                                                                                                                                               <  2:386400/237‑1 (MQ=255)
                                                                              aGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGGCCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTTCCGCCCCTTTCGATGCGGCCTAAGAGGGGAGGGGGTccc                                                                                                                                                             >  1:412857/1‑236 (MQ=255)
                                                                                     ccGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGt                                                                                                                                                     <  2:954223/239‑1 (MQ=255)
                                                                                     ccGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGt                                                                                                                                                     <  2:412857/239‑1 (MQ=255)
                                                                                      cGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCa                                                                                                                                                                                                                                     <  2:450892/158‑1 (MQ=255)
                                                                                      cGCAGCACCAATCAGTTCCTGCGGATCCCCCCCGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCCCAACCAGTGCTTTAGTCATTTTTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCC‑CCAGCTCGACGCACATGGCGGGGGTGAGCATTTTTTCCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGt                                                                                                                                                     <  2:869921/238‑1 (MQ=255)
                                                                                              cAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCCGCTCGGCCCACATGCCGCGGGGGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGGGATGGGGTCACGTCCCAGTTCCCtttt                                                                                                                                             >  2:443145/1‑237 (MQ=255)
                                                                                              cAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGACCGATTGCCCAACCAGGCGCTGGAGGCCTCGTCCTCAACCCACGCTTTAGCCATTTTTGTTTTGAAATAGGCCGTTGCAATACCGCTTTCCTGAATATTTTGGTCCGCCCATCT‑GACGCACCCGCCGCGGGAGTGCGTTTTTTCCCCCCCCTTCCCTGCCGCATTAGGGGGGATGGGGTCACCGCCCAGTTCGcctg                                                                                                                                              >  1:915142/1‑234 (MQ=255)
                                                                                               aaTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCa                                                                                                                                           <  2:399364/239‑1 (MQ=255)
                                                                                               aaTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCa                                                                                                                                           <  2:1162462/239‑1 (MQ=255)
                                                                                                aTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTTCACAACCAGGCGGTGAAGGCTTCGTCCCCCACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTTACCTGAATATTTTGGCGCG‑CCAGCTCGACGCAAATGCCGCGGGTGGGCATTTTTACCCGCCCCTTCGTTGGGGCATAAAGGGTGATGGTGTCCCGGCCCAGTTCGCCTTGcc                                                                                                                                           >  1:552815/1‑237 (MQ=255)
                                                                                                aTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCAt                                                                                                                                          <  2:566857/239‑1 (MQ=255)
                                                                                                aTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGGGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGGGATGGAGTCACGGCCCAGTTCGCTTTGcc                                                                                                                                           >  2:911642/1‑237 (MQ=255)
                                                                                                aTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGGGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCCGCTCGACGCACATGCCGCGGGTGAGCATTTTTAACGCCCCCTTCGATGCGGCCTAAGGGGTGATGGTGTCCCGGCCCAGGTCGCTTTGCa                                                                                                                                           >  1:1162462/1‑238 (MQ=255)
                                                                                                aTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGGGCCTTTGGCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTTTGGGGCG‑CCCGCCCCGCCCAAATTGCGCTGGGGAGCCTTTTTACCGGCCCTTTCGATTCCGCATAAGGGGTGGTGGCGTCCAGTCCCCGTTTCGTTTGCAt                                                                                                                                          >  1:132902/1‑239 (MQ=255)
                                                                                                     ttCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGc                                                                                                                                     >  2:338043/1‑239 (MQ=255)
                                                                                                      tCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGc                                                                                                                                     <  1:84654/238‑1 (MQ=255)
                                                                                                      ccatGCGGATCTCCCAAGCGTGCGGCGGGGGTCCGTTTGCCCAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGTTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGc                                                                                                                                     <  1:189785/235‑1 (MQ=255)
                                                                                                       ccTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCaa                                                                                                                                   <  2:1023395/239‑1 (MQ=255)
                                                                                                       ccTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCCTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCaa                                                                                                                                   <  1:441473/239‑1 (MQ=255)
                                                                                                        cTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTTGGCATTTCTGTTTTTAAATAGCCCGGCGCCATACCGTTTGCCTGAATATTTTTGCGCG‑CCAGCCCGCCCGCCATTCCGCGGGGGAGCATTTTTTCCGCCCCCTTCCATGCCGCCTAAGGGGGGAGTGGGTTACGGCCCAGGTCCACTTGCCTCGAGCcaa                                                                                                                                  >  1:563379/1‑239 (MQ=255)
                                                                                                        cTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTTTGGCGCG‑CCAGCTCGACGCCCATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGGTGGGGTGACGTCCCCGTTCGCCTTGCATTGAGCaaa                                                                                                                                  >  1:958758/1‑239 (MQ=255)
                                                                                                               tctcCCCAGCGTGCGGCGGGGGTCCGTTTGCAAAACCAGGCGGTGAAGGCTTCGGCCTCAACCCGGGCCTTAGTCATTTCTGGTTTGGAATAGCCCGGGGCAATACCGTTGACCTGAATATTTTGGCGCG‑CCAGCTCGACGCACATACCGCGGGGGAGCATTTTTTCCCCCCCTTTCCATCCGGCCCAACGGGTGGGGGGGTCCCGTCCCACTTCCCTTTGCATCGGGCAAATATtaat                                                                                                                           >  1:126879/1‑239 (MQ=255)
                                                                                                                ctcCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTg                                                                                                                                                                                                              <  2:1120797/155‑1 (MQ=255)
                                                                                                                         gTGCGGCGGGGGTCCTTTTGGACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGTAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTAc                                                                                                                   <  2:1177413/237‑1 (MQ=255)
                                                                                                                            gggcggGGGCCCGTTTGCACAACCAGGCGGTGAATGCTTCGTCCTCAACCAGTGCTGTATTCATTTCTGTTTGGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATTCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGcc                                                                                                              <  1:1007135/238‑1 (MQ=255)
                                                                                                                            cggcggGTGTCCTTTTGCACAACCGGGCGGTGAAGGCTGCGTCCTAAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATTGGTTGGCGCG‑CCAGCTGGACCCAGATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGcc                                                                                                              <  1:329280/239‑1 (MQ=255)
                                                                                                                             ggcgtGGGTCCGTTTTCACACCCAGGCGGTGAAGGCTGCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGcc                                                                                                              <  2:206391/238‑1 (MQ=255)
                                                                                                                             ggcggGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGcc                                                                                                              <  2:1054588/238‑1 (MQ=255)
                                                                                                                               cggGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCtt                                                                                                            <  2:1098445/238‑1 (MQ=255)
                                                                                                                                    gTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGtt                                                                                                       <  1:1045176/238‑1 (MQ=255)
                                                                                                                                       cGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAAc                                                                                                   <  1:571135/239‑1 (MQ=255)
                                                                                                                                               caACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGAc                                                                                           <  2:132902/239‑1 (MQ=255)
                                                                                                                                                  ccAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAg                                                                                                                                      <  2:609450/193‑1 (MQ=255)
                                                                                                                                                          tGAAGGCTTCGTCCTCAACCAGTGCTTTCGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCCCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCCCGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTCGGGTCTACCATGTGCCGAGTTACCGCt                                                                                >  1:939864/1‑239 (MQ=255)
                                                                                                                                                            aaGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCCTAAGGGGTGATGGGGTCCCGTCCCAGTTCGCTTTGCATCGAGCAAATATtaa                                                                                                                            >  1:609450/1‑193 (MQ=255)
                                                                                                                                                            aaGGCCTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTTGGGCG‑CCAGCTCGGCGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCCGCATAAGGGGGGATGGGGTTACGTACCCGGTCGGTTTGCCTCGGGCAAAATTTAATAAATTTACCTCCCTTGCGTTTAACCATGTGACGAGTTACCGCTTg                                                                              >  1:1176011/1‑239 (MQ=255)
                                                                                                                                                                 ttCGTCCTCAACCAGTGCTTTTGTCCTTTCTGTTTTGAAATAACCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCCTTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATAATAATAACTTTACCTGCCTTTCGTTCAACCATGTGAAGAGTTAACGCTTGCGAt                                                                          >  1:937318/1‑238 (MQ=255)
                                                                                                                                                                    gTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCa                                                                      >  1:489573/1‑239 (MQ=255)
                                                                                                                                                                         cAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAac                                                                 >  2:936661/1‑239 (MQ=255)
                                                                                                                                                                             cAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcgg                                                             <  2:441094/239‑1 (MQ=255)
                                                                                                                                                                             cAGTGCTTTAGGCATTTCTTTGTGGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcgg                                                             <  1:98750/239‑1 (MQ=255)
                                                                                                                                                                               gTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGa                                                                                                                                                                      >  2:503561/1‑132 (MQ=255)
                                                                                                                                                                               gTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGa                                                                                                                                                                      <  1:503561/132‑1 (MQ=255)
                                                                                                                                                                                tGCTTTAGTCATTTCTGTTTTGAAATATCCCGCCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCAAGTACCAGTTCGATGTGCATCGAGCTAATATTAATAACTTTAGCTGCCTTGGGTTCAACCATTCGACGACGTAACGATTACGATACCAGGAaccgggcag                                                          >  1:824031/1‑232 (MQ=255)
                                                                                                                                                                                tGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcggcgg                                                          >  2:47196/1‑239 (MQ=255)
                                                                                                                                                                                tGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcggcg                                                           >  1:892784/1‑238 (MQ=255)
                                                                                                                                                                                           tttCTGTTTTGAAATAGCCCGGCGCAATTCCGTTGACCTGAATATTGTGGCGCC‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACt                                               <  2:956968/239‑1 (MQ=255)
                                                                                                                                                                                           tttCTGTTTTGAAATAGCCCGGCGCAATCCCTTTGACCTGAATATTGTGGCGCG‑CCAGCGCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACt                                               <  1:436845/239‑1 (MQ=255)
                                                                                                                                                                                            ttCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACt                                               >  2:374954/1‑238 (MQ=255)
                                                                                                                                                                                                gTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGAt                                          <  2:1179975/239‑1 (MQ=255)
                                                                                                                                                                                                 ttttGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGAt                                          >  2:738353/1‑238 (MQ=255)
                                                                                                                                                                                                 ttttGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGAt                                          >  2:1167331/1‑238 (MQ=255)
                                                                                                                                                                                                 ttttGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATc                                         >  2:673352/1‑239 (MQ=255)
                                                                                                                                                                                                    tGAAACAGCCCGGCGCAATACCGTTGACCGGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGTGGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTGGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATcaca                                      <  1:113247/239‑1 (MQ=255)
                                                                                                                                                                                                     gAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCAcat                                     <  2:1131338/239‑1 (MQ=255)
                                                                                                                                                                                                         tAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTCACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCAtt                                 <  2:407567/239‑1 (MQ=255)
                                                                                                                                                                                                           gCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTcc                               >  2:1109346/1‑239 (MQ=255)
                                                                                                                                                                                                             ccGGCGCAATACCGTTGACCTGAATATTGTGGCGCT‑CCAGTTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTCTGCAGCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCa                              <  1:830408/238‑1 (MQ=255)
                                                                                                                                                                                                             ccGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCa                              <  2:489573/238‑1 (MQ=255)
                                                                                                                                                                                                               ggCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCActc                           <  1:443145/239‑1 (MQ=255)
                                                                                                                                                                                                                gcgcAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCActct                          >  2:767509/1‑239 (MQ=255)
                                                                                                                                                                                                                        ccGTTGACCTGAATATTGTGCCGCG‑CCAGCTCGGCGCACATGCCGCGGTTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAgg                  <  1:911642/239‑1 (MQ=255)
                                                                                                                                                                                                                        ccGTGGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAgg                  <  1:289469/239‑1 (MQ=255)
                                                                                                                                                                                                                          gTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAggg                 <  2:425524/238‑1 (MQ=255)
                                                                                                                                                                                                                          gTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAggg                 >  1:425524/1‑238 (MQ=255)
                                                                                                                                                                                                                           ttGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACt                                               >  2:797523/1‑207 (MQ=255)
                                                                                                                                                                                                                           ttGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACt                                               <  1:797523/207‑1 (MQ=255)
                                                                                                                                                                                                                             gACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGAACt             <  2:919724/239‑1 (MQ=255)
                                                                                                                                                                                                                              aCCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCCTGTTCATGTAACTc            >  2:1087190/1‑239 (MQ=255)
                                                                                                                                                                                                                              aCCGGATTATTGTGTCGCG‑CCAGCTGGCCGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTATCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTTCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCAct                            <  1:1068965/223‑1 (MQ=255)
                                                                                                                                                                                                                                 tGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGAACTCAGt         <  2:552815/239‑1 (MQ=255)
                                                                                                                                                                                                                                   aaTATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGAt                                                                          <  1:39244/172‑1 (MQ=255)
                                                                                                                                                                                                                                   aaTATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGaa               >  2:614651/1‑231 (MQ=255)
                                                                                                                                                                                                                                   aaTATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGaa               <  1:614651/231‑1 (MQ=255)
                                                                                                                                                                                                                                    atatTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGAACTCAGTaa       <  2:958758/238‑1 (MQ=255)
                                                                                                                                                                                                                                        tgtgGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGGGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCGTTCCACTCTTGTTCAgg                  >  2:1068965/1‑223 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                              
GGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATTGTGGCGCG‑CCAGCTCGACGCACATGCCGCGGGTGAGCATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGTCACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTGGTTTACTGCGATCACATCATTCCACTCTTGTTCAGGGAACTCAGTAAAAGGA  >  NC_000913/4492583‑4493053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A