Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
142 |
103.7 |
2603848 |
81.8% |
2129947 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
794,938 |
C→T |
11.3% |
intergenic (+16/‑151) |
acrZ → / → modA |
AcrAB‑TolC efflux pump accessory protein, membrane‑associated/molybdate ABC transporter periplasmic binding protein, chlorate resistance protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 794,938 | 0 | C | T | 11.3%
| 310.8
/ 3.4
| 132 | intergenic (+16/‑151) | acrZ/modA | AcrAB‑TolC efflux pump accessory protein, membrane‑associated/molybdate ABC transporter periplasmic binding protein, chlorate resistance protein |
| Reads supporting (aligned to +/- strand): ref base C (77/35); new base T (2/14); total (82/50) |
| Fisher's exact test for biased strand distribution p-value = 2.37e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 |
Only 100 of 132 total aligned reads displayed.
ACCGCACAAAAGGGGAGTGCTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAAT > NC_000913/794701‑795174
|
ctaaaaagggtgtttgttttttGTGTTTAGCGTTTAGAATATGCTCATGACTATATCTGGAGTTTACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGt < 1:1075630/223‑1 (MQ=255)
gggttgtttttttttGCTTTGAGGTTAGAATATTTTCATAATGTTATCTGGAG‑TGACCCTTTTAAGATTTATTAAAAAGTGTGGTATGCGCCGTAATCCTGGTTCCTGTCTTGATGGCCATTCTCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCTGGCAtt < 1:674814/231‑1 (MQ=255)
aGTGCTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCAttt > 2:980702/1‑237 (MQ=255)
aGTGCTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGGGTTGGTAAAAAAGACCAGCCCGGACAAAATAATTGATTCCCTGAATGCCCGCTTAGCCGGGCAttt > 2:674814/1‑237 (MQ=255)
tGCTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGACGTATTCAACATCTTTTCTGGGGTTGGTAAAAAAGACAAGCCCGGACAAAACCATTGATTCCCTGAAAGCCCACTTAGTCAGGCCttttttt > 1:530153/1‑239 (MQ=255)
tGCTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCAttttctt > 2:374129/1‑239 (MQ=255)
cTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGCCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGGGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAACATCATTTATTCCCTGAATGCCCGCTTAGCCGGGCcttttctttt > 1:787422/1‑239 (MQ=255)
cTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGAATATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTTTCGTGATGGCCATCATCCTGGGTCTGTTTTACGGTCGTGGTGCAGTATTCAACATCTTTTATGGTGTTGGTAAAAAAGACCAGCCCGGCCCAAATCATTGATTCCCTGATTGCCCGGTATGACGGGCAttttctttt > 1:1104786/1‑239 (MQ=255)
cTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACtt > 1:860582/1‑238 (MQ=255)
aGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGACGGGCATTTTCTTTTTCTCAACtt > 2:234738/1‑235 (MQ=255)
aGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGCCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGCCGGGcctgtcacttatacaactctccg > 2:514137/1‑216 (MQ=255)
ttAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTATGGTGTTGGTAAAAAGGACCAGCCCGGACAAAATCATTGATTCCTCGAATGCCCGCTTAGTCGGGCCTTTTTTTTTTCTAAACTTCCTGtttt > 1:972636/1‑238 (MQ=255)
gTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGa > 2:856272/1‑239 (MQ=255)
tctcATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGTTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCGGAATGCTCCCTTAGTCGGCCATTTTCTTTTTTTCAACTTCCTCATTTTCCTGCCgtt > 1:730542/1‑237 (MQ=255)
tctcATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAg > 2:412017/1‑196 (MQ=255)
tctcATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGAGTCTGCTTTACGGTCTTGGTGAAGTATTCAAAATCTTTTCTGGTGTTGGTAAAAACGACCAGCCCGGACAAATTCATTGATTGCCTGAAGGCCCGCTTAGTCGGGCAGTTTCTTTTTCTCAACTTCTTGCTTTTCCTGcagct > 2:479510/1‑235 (MQ=255)
ctcATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAACGCCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGTGGAAGTATTCAACATCTTTTCTGGTGTTGGTATAAAAGACCAGCCCGGCCAAAATCATTGATTCCCTGAATGACGGCTCAGACGTGCAGTTTATTTTTCTAAAATTCCTGCTTGTCCTCCCGata > 1:915075/1‑239 (MQ=255)
aTGACTCTATCTGGAGTTGACCATGTT‑AGAGTTATTAATAAGTCTGGTATTCCACGTAATCATGGTACCTGTCGGGTGGACAATCTTCCTGGGACTGATTTACGTGCTTGGTGTAGTATTGACCATCTTTTCTGGTGTTGGTAAAAACGACCAGGTCGGACAAAATAATTACTTACGTGTATGTCCCCTAGGCCGGGTCTTTTACTTTTCTCAACTCCCGGCTTTTccatcccgatttg > 1:1173603/1‑228 (MQ=255)
tGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTATGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGAtttttt > 2:1114174/1‑239 (MQ=255)
tGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTACAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCcgg > 1:567173/1‑196 (MQ=255)
cTATAGCTGGAGTTGGACCTGTT‑AGGGTTATTAAAAAGTTTGGTATTCCGCTTAATCAGGGTGCCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTc < 2:1152519/239‑1 (MQ=255)
tatCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCGGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTTTCAACTTCCTGCTTTTCCTGCCGGTATTTTTTTTTa > 1:84516/1‑239 (MQ=255)
tGGAGTTGCCCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTTCCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTa < 2:569767/239‑1 (MQ=255)
gTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAACATCCTTGATTCCCTGAATGCCCACTTCGTCGGGGCTTTTTTTTTTTTCAACTTCTCTCTTTTCCTGCCGATATTTTTTCTTATTTAcccc > 1:526258/1‑237 (MQ=255)
gTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCAATCATCCTGGGTATGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGGGTTGTTAAAAAAGCCCAGCCCGAACAAACACATTGCTTCCCTGACAGCCCGCTTAGTCGGGCATTTTATTTTTTTCAACTTCCTGCTTTTCCTGCCGGAATTTTTTTTTATCTTCCta > 1:228994/1‑238 (MQ=255)
ttctgtttttgtttttttaAAATGTCTTGTTTGCGCCTTAATCATGTTTCCTGTCGTGATGGCCATCTGCCTGGGTCTGTTTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGCCCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTcaca < 1:1278105/223‑1 (MQ=255)
tacctattttggttttttaAAAAGTCTGTTTTTCGCCGTAATCATGTTTCCTTTCGTTATGGCCATAATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATTTTTGCTGGTTTTGGAAAAAAAGCCCAGCCCGGACAAAATCATTTATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTcaca < 1:1256205/223‑1 (MQ=255)
aCCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTc > 2:1173028/1‑208 (MQ=255)
aCCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTcaca < 2:478787/238‑1 (MQ=255)
aCCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTcaca > 1:478787/1‑238 (MQ=255)
aCCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACaa > 2:34293/1‑239 (MQ=255)
aCCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCACCATCCTGTGTCTGATTTACGGTCTTGGTGAAGTTTTCAACATCTTTTCTGGCGTTGGTAAAAAAGACCAGACCGGACAAAATCATTGCTTCCCTGTATGCCCGCATAGTCGGGCATTTTCTTTTTCCAAATTTCTTCCTTTTACTCCCGACATTTTTTTTTATTTAACTCACaa > 1:809832/1‑239 (MQ=255)
tttt‑AGAGCTATTAAAAAAACTCGGATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAGGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGATTAGTCGGGCATTTTCTTTTTCTCACCTTCCTGCTTTTCTTGCCGTTATTTTTTTTTATCTACCTCACAACGGt > 1:254907/3‑239 (MQ=255)
tGTT‑AGAGTTATTAAAAAGACTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGCCTGATTTACGGTCTGGGGGAAGCATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATAATGGATTACCTGAATGCCAGCTTAGACGGGCCTTTTCTTTTTCTCAACTTCCGCATTTTCCTGCCAAAATtttttttttactcatctacaaaggt > 1:801399/1‑222 (MQ=255)
gTT‑AGAGTTTTTAAAAAGTTTGGTTTTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGtt < 2:1006001/239‑1 (MQ=255)
ttattaAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTTTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATa > 2:505815/1‑239 (MQ=255)
ttattaAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGACGGCCATCATCCTGGGTCTGATTTACGGTCTTGTTAAAGCTTTCAACATCTTTTCTGGTGTTGGTAAAAAAGCCCAGCCCGGCCAAAACCATTGCTTCCCTGAATGCCCGCTTACCAGGGACTTTTCTTTTTCTCAACTTCCCGCATTTCCTTCCGAAATTTTTTTTTATCTACCTCAAAAAGGTTAgacaaa > 1:602712/1‑234 (MQ=255)
attaAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGAttggaaaaaaa > 1:765509/1‑230 (MQ=255)
ttaAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATa > 2:692693/1‑236 (MQ=255)
taAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCCCAAAGGTTAGCAATAAcct > 2:1018660/1‑237 (MQ=255)
tCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCCCTATTTTTTCTTATCTACCTCACAACGGTTAGCAATAACTGCTGGGaa > 2:1260187/1‑239 (MQ=255)
ttGGTTTTCGCCGTAATCCTGGTCCCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGa < 2:765509/236‑1 (MQ=255)
ttttccccttaatctgtgttccTGTGTTGTTGGCCTTCTTCCGGGGTCTGTTTTACGGTCTGGGTGAATTATACAACATCTTTTCTGGTGTTGGTAAAAAAGCCCGGCCCGGAAAAATTCATTGATTCCCTGAATGCCCGTTTATTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTc < 1:934918/219‑1 (MQ=255)
gCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACTTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGt > 2:796033/1‑239 (MQ=255)
cccGTAATCAGGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGt < 2:935911/238‑1 (MQ=255)
cGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGCTTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCACTAACTGCTGGGAAAATTCCGAGTTa > 2:757363/1‑239 (MQ=255)
cGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGACTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTa > 2:1050640/1‑239 (MQ=255)
tAATCATGGTACCTGTCGTGAGGGCCAGCATCCTGGTTCTTATTTACGGTTTTGGGGAATTATTCAACATCTTTTCTGGGGTTGGTAAAAAAGCCCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGt < 2:526258/239‑1 (MQ=255)
cggtCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAg < 2:882930/235‑1 (MQ=255)
ccTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATAttt > 2:342904/1‑237 (MQ=255)
ccTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTg > 2:819064/1‑238 (MQ=255)
gTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTTTCTACCTCACAAAGGTTAGCAATAACTCCTGGGAAAATTCCGCTTTAATCGTTATAtttcgtg > 1:882930/1‑234 (MQ=255)
gTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTATTTTTCTCAACTTCCTGCTTTTCCTGCCGATCTTTTTTCTTATCTACCTCACAAAGGTTAGCAATAAATGCTGGGAAAATTCCGAGTTAGTCGTAAAAtttacg > 1:1045743/1‑234 (MQ=255)
tCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGcc < 2:787422/239‑1 (MQ=255)
tagtccccttattcTGGGTCTGTGTTACGGTTTGGGTAAAGTTTTCAACATTTTTTCGGGGTTTGGTAAAAAAGCCCAGCCCGGATAAAATCATTTATTCCCTGATTGCCCGTTTAGTCGGGAATTTTCTTTTTCTCAACTGCCGTCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACa < 1:800841/226‑1 (MQ=255)
gATGGCCATCATCCGGGGTCTGATTTACGGTCTTGGTGAAGTATTAAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACa < 2:643275/239‑1 (MQ=255)
gtGGCCTTCATCTTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACa < 2:254907/237‑1 (MQ=255)
aTGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACATCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTCAGCAATAACTGCTGAGAAAATTCCGCGTTAGTCGTTATATTGTCCCCTACAt > 2:919915/1‑239 (MQ=255)
aTGCCCATCCTCCTGGTTCTGATTTACGGTCTTGGTAAAGTATTCAACATCTTTTCGGGTGTTGGTAAAAAAGTCCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACa < 2:801399/238‑1 (MQ=255)
cattcttgtGGGTCTTATTAATGGTCTTGGGTGTGTATCCAACATTTTTTCTGGTGTTGGTAAATAAGACCAGCCCGGTCAATATCATGGATCCCCGGATTGCCCGCTTAGTCGGGCAGTGTCTTTTCCTAAGCCGCCTGCTTTTCCTGCCGATATTTTGTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGt < 1:43755/231‑1 (MQ=255)
ttttcgtGGGTTTGGTTACCGGTCTTGGTAAAGATTCCAACATTTTTTCGGGTGTTGGTAAAAAAGCCCAGCCCGGACAAAATCATGACTTCCCTGAATGCCCTGTTAGTCGGGCATTTTCTTTTACTCAATTGCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACg < 1:383110/230‑1 (MQ=255)
tGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATCTTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTAAATTTTCGCCTACAAAACGTTACAta > 1:361571/1‑236 (MQ=255)
gTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATCTTGTCGCCTACATAACGTTCCATTAAggg > 2:55216/1‑239 (MQ=255)
tCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAg > 2:383110/1‑236 (MQ=255)
tCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGGGTTGGTAAAAAAGCCCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAggg < 2:84516/238‑1 (MQ=255)
aTTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTa > 2:878103/1‑238 (MQ=255)
ttGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTa > 1:1121028/1‑143 (MQ=255)
ttGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTa < 2:1121028/143‑1 (MQ=255)
ttGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGATCg > 2:600729/1‑239 (MQ=255)
ttGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTAATCTGTTATATTGTCGCCTACATAAAGTTAAATTAAAGGGTAACAAATGGccgc > 1:83331/1‑236 (MQ=255)
ggTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGTCCCGTa > 2:708555/1‑239 (MQ=255)
gggAAGTATTCAACTTTTTTTCTGGGTGTGGTAAAAAAGACCAGCCCGAAAAAACTCTGTGATCCCCGGAAGGCCCGTTTACTCGGGCATTTTATTTGTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTaa < 1:1072057/237‑1 (MQ=255)
gTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACa < 2:567712/199‑1 (MQ=255)
tATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAggg > 2:1283039/1‑215 (MQ=255)
aaCATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTTTTGCCTACTTAACGTTACATTAATGGGTAACCAATAGCTCGCCAATGGGTGaaat > 1:1079835/1‑237 (MQ=255)
cATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTTTCGCCTCCATAACGTTACATTAAGGGGGTACCCATGGCTCGTAAATGGTTGAAATTg > 1:691518/1‑239 (MQ=255)
cTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGttt > 2:1230687/1‑239 (MQ=255)
cTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAACGTTAGCAATAACTGCTGGGAAAATTCCTAGTTAGTCGTTATATTGTCGCCTACATAACGTTCCATTAAGGGGTTACCAATGGCTCGGAAATTGTTGGAATTGttt > 1:885400/1‑239 (MQ=255)
ttCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAAtt < 2:1062407/156‑1 (MQ=255)
gtgtggtgTAAAAAAACCCCGACGGGAAAAAATTATTACTCTCCTTACTGCCCGCTTAGGCGGGCCTTGTCTTTTTCCTAACTCCCTGCTTTTCCTGCCGATATTTTTTCTTATCGTCCTCACAAAGGTGAGCAATAACGGCGGGTAAAATTCCGAGTTAGTCGTTATATTGTCGTCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCgggg < 1:661089/232‑1 (MQ=255)
gtTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTATTCGTTAGATTTTCGCCTACCTACCGTTACATTAAGGGGGTACCACTGGATCGTAAATGGTTGGACTTTTTTGCCGGggcg > 2:85132/1‑238 (MQ=255)
ttGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGCATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGGTATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGACAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACCTTAAGGGGTTACCAAGGGCTCGTAAAAGGGGTAACTTTTTTTCGGGgggggc > 1:679390/1‑239 (MQ=255)
ttGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGTggcggc > 2:634785/1‑239 (MQ=255)
ggTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGTCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCTAGTTAGTCGTTATATTGTCGCCTACATAACGTTAAATTAAGGGGTTACCAATGGCTTGTAAATGGTTGTAACTGTTTTCCGGggcggga > 1:611298/1‑236 (MQ=255)
gaaaaaaaGACCAGCCCGGACAAACTCATTGATTCCCTGAATGCCCGTTTAGTAGGGCACTTTCTTTTCCCCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGTACTTGTTTGCCGGGGCGGCAct < 2:1287887/237‑1 (MQ=255)
gTAAAAAAGCCCAGCCCGGAAAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCAct < 2:1103484/239‑1 (MQ=255)
ccAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTTGCt > 2:503725/1‑239 (MQ=255)
cAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCCCTCTCTTTc > 2:1187436/1‑235 (MQ=255)
gCCCGGAAAAAATCCTTGATTCCCTGAATGCCCGTTTATTCGGGCTTTTTCTTTTTCTCATCTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGtt < 2:603164/239‑1 (MQ=255)
ccGGACAAAATCATTGATTCCCTGAATGCCCGTTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGtt < 1:98140/166‑1 (MQ=255)
aggagttgttaataagagacaggAATGCCCGTTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGc < 2:277605/216‑1 (MQ=255)
gACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATCTTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTTCATAACGTTCCATTAAGGGGTTACCAATGGCCAGGAAATGTGTTAAATTTTTTGCCGTGGGGGAATCCTCTTTTGGTGTTgtgg > 1:603164/1‑235 (MQ=255)
aTCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTTGCAATGc > 2:339598/1‑239 (MQ=255)
tCATTGGTTCCCTGAATGCCCGTTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCa < 2:4872/239‑1 (MQ=255)
tCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTa > 1:1285471/1‑77 (MQ=255)
tCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTa < 2:1285471/77‑1 (MQ=255)
ccTGAATGCCTGCTTATCCGGGATTTTTCTTTTTCACAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATg < 2:530153/239‑1 (MQ=255)
catGAATGCCCGTTTAGTTGGGTATTGTCTTTTTGTCAACTTCCTGCTTTTCCTGCCGATATTTTTACTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAGCTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATg < 2:826486/237‑1 (MQ=255)
cccGTTTAGTCGGGCATTTTCTTTTCCTCACCTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGa < 2:972636/237‑1 (MQ=255)
cGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGGAAATGGTTTAACTTGTTTGCCGGGGGGGCACTCTCTTTTGCTGTTTCTGGGAATGAACTGGCAGAAGAAAGGaaaaa > 1:953205/1‑238 (MQ=255)
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ACCGCACAAAAGGGGAGTGCTTTTCTGTGCTTAGCGGTTAGAATAGTCTCATGACTATATCTGGAGTTGACCATGTT‑AGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAAT > NC_000913/794701‑795174
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
