Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
142 |
103.7 |
2603848 |
81.8% |
2129947 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,150,395 |
T→A |
11.6% |
intergenic (‑131/+51) |
eptC ← / ← ppc |
LPS heptose I phosphoethanolamine transferase/phosphoenolpyruvate carboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,150,395 | 0 | T | A | 11.6%
| 349.0
/ 6.0
| 137 | intergenic (‑131/+51) | eptC/ppc | LPS heptose I phosphoethanolamine transferase/phosphoenolpyruvate carboxylase |
| Reads supporting (aligned to +/- strand): ref base T (64/46); new base A (14/4); total (85/52) |
| Fisher's exact test for biased strand distribution p-value = 1.28e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 137 total aligned reads displayed.
AATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAGCTGAATAGACTCTGCAATCCACG > NC_000913/4150160‑4150630
|
aataatGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGATGCAGGAAATATATTGAAAACGAAGGG‑GTTAGAAAAAAAGAAtt > 1:362999/1‑239 (MQ=255)
aataatGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGAGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAACAAGAAAAATATTTTAAAAAAGGGG‑GTTGGAAAAAAAGAAtt > 1:971968/1‑239 (MQ=255)
tGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGAATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGG‑GTTAGAACAGAAGAATTTCAGa > 2:423992/1‑239 (MQ=255)
tGGCCTGTAGCAGAGTACAGAAAAACCCAAAGTAGAGCAGAGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGATTAGCCTGGACTTCTGTGGAATGAATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAATGACAATTCCTTAAGGTAAACTGAAGGGATATTACAAATTTGAATAAAATGACGAAAGAAAAAAATTGAAAAAGAGAGG‑GTTGGAAAAGAAAAATTTAAGa > 1:27923/1‑239 (MQ=255)
tGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACGGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGAATTTCAGAAAAc > 2:400221/1‑238 (MQ=255)
gagaAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCaaaa > 2:430241/1‑238 (MQ=255)
aaaCCAAAATGAGGTCAATGCCCAACCCAGGGGTTTCCAGCTAAAAAGAGGTTTAGACGGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGa < 1:79412/239‑1 (MQ=255)
aaCCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAg > 2:125628/1‑239 (MQ=255)
aGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAagag < 2:53017/238‑1 (MQ=255)
tGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACTCGGGTTTGCGGAATAGGac > 2:829187/1‑238 (MQ=255)
tGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAAAGGaa > 2:646375/1‑239 (MQ=255)
tGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAAAAGAATTTCAGAAAAAC‑CTAGCGCAAAAGC‑AAGAGGGTTTGAAAAAAAGGaa > 1:1129470/1‑239 (MQ=255)
cccAGGGCTTTCCAGGTAAAAAGGGGTTTAGGCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAATCGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TGAGc < 2:167977/239‑1 (MQ=255)
cccAGGGCTTTCCAGCTAAAAAGGGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGc < 2:971968/239‑1 (MQ=255)
ccAGGTCTTTCCCGCAAAAAAGAGGTTTGGCCGGGACTTCGGTGGCAAGAATAGTAAAAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAACCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGcc < 1:1259336/239‑1 (MQ=255)
ggCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACCATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATAAATTGAAAACATGGGT‑GTTAGAACAGAAGAATTTCAGAAAACCTCTCGC‑CAAAGGC‑ACGAGGGTTT‑CAAAAAAGGaaaaataaaccggaa > 1:282538/1‑226 (MQ=255)
ggCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTa > 2:1259336/1‑239 (MQ=255)
tCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTGCCGCAAAAGC‑ACGAGGGTTTGCAGAAGGGGAAGA‑TTAGCCGGTATTACg > 2:998149/1‑239 (MQ=255)
tCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAAA‑TAAGCCGGAATTACg > 1:550123/1‑239 (MQ=255)
gTTTAGCCTGGATTTCTGTGGAATGCTTGGAAAGAACCTGTTTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATAGCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATAAATGGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAAt < 1:204038/239‑1 (MQ=255)
tttGGATTTTTGTGGAAGTCATAGTAAGAACCTTTCTTAAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATCCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGc < 1:993043/237‑1 (MQ=255)
gACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTACCCGGTATTACGCAAACCTGCCGCAATCCCGGCaaaa > 1:759109/1‑237 (MQ=255)
cTTTTGGGGAATGCATAGTAAGAACCTGTCTGGAAAAAATATCGCCGAATGTAACGAAAATTCCTAAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGGTGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGt < 1:299211/239‑1 (MQ=255)
aggtgggggaagcaaaataaaaaaCCTTTCTGTAAAAAAGAGCGCAGAATTTAACGAAAATTCCTTAAGGATTTCTGAAGTTATATTCGAAATTGGAAAAAAAGGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAATAATTTCAGAAAACC‑CGCGCCCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATCCCTGCCGCAATCCCGGCAATAGt < 1:659428/217‑1 (MQ=255)
ttCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTg < 2:322807/239‑1 (MQ=255)
ttCTGTGGAATGAATATTAAGAACCGTGCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAACCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGt < 2:27923/238‑1 (MQ=255)
ttCTGGGGAATGCATAGTAAGAACCTGTCTTGAAAAAATACCGCCGAATGTAACGACAATTCCTTAAGGATATCGGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTg < 2:283646/239‑1 (MQ=255)
tCTGGGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGa < 2:798409/239‑1 (MQ=255)
tgtgGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGAATTACGCATACCTGCCGCAATCCCGGCAATAGTGAcc > 2:139468/1‑239 (MQ=255)
aaTGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGA‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTa > 2:1277822/1‑238 (MQ=255)
tGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAAc > 2:121526/1‑238 (MQ=255)
cATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGA‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGAAGAAGAGGAAGA‑TTAGCCGGTATTACCCAAACCTGCCCAAATCCCGGAAAAAGTGAACATAAACGCt > 1:1219048/1‑239 (MQ=255)
aGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAAATCCTTAATGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAAGATATTGAAAACGAGGGA‑GTTAGAACAGAAGACTTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTTCAGAAGAGGAAGT‑TAAGACGGTATTACGAAACCCTGACGCCATCCCGGCAAAAGTGAACATTAACGCtttt > 1:1013425/1‑237 (MQ=255)
aaGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCCCAATCCCGGCAATAGTGACCATTAACGCTTGTTCg > 2:997394/1‑239 (MQ=255)
acatGTATTGGAAAAATATCCCCGAATGGAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACCGAAATATATTGAAAACGAGGGG‑GTTAGAACAGAAGCATTTCAGAAAAAC‑CTCGCGCAAAAGC‑ACAAGGGGTTGGAGAGAGGGCAGC‑TTAGCCGGACTTACGAATACCAGCCGCAATACAGGAAAAAGGGACCCTTCACGCATGTTGGaggg > 1:961268/4‑236 (MQ=255)
aCCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCGGACTTTGAATAAAATGCAGACAGAAATATATTGAAAATGAGGGC‑GTTAGAACAGAAGCATTCAAGAAAACC‑CTCGCGCAAAAGC‑ACGCGAGTTTGCTGAAGAGGAAGA‑TTAGCCGGTAGTAAGCATTCCGGCCTAAATCCCGCCAATTGGAACAATTaaaacttattgaagcc > 1:107987/1‑225 (MQ=255)
aCCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGGGACCATTAACGCTTGTTCGagcc > 2:950087/1‑236 (MQ=255)
aCCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGAATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAACCGGTATTACGCATACCTGCCGCAATCCCGGAAAAAGTGAACATTAACGCTTGTacgacgg > 1:1288178/1‑238 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTCAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGC‑GTTAGAACAGAAGCATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCGTACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTGTACGCGAgg > 2:689627/1‑238 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGACTAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAgg > 2:1219234/1‑238 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCaga < 1:411385/160‑1 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGa > 1:422666/1‑213 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGa < 2:422666/213‑1 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAgg > 2:112665/1‑238 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGCATTACGCATACCTGCCGCAATCCCGGCAATAGTGCCCATTAACGCTTGTTCGACGCGAGGa > 2:920783/1‑239 (MQ=255)
tCTTGAAAAAATATCGCCGAATGTAAAGACAATTCCTTAAGGGTATCTGAAGGGATATACAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGG‑GTTAGAACAGAAGCATTTAAGAAAACC‑CTCGCGCAGAAGC‑ACGAGGGTTTGCGGAAAAGGAAAA‑TTAGACGGCATTAGGCATCCCTGCCGACATCCCCGCAAGAATACACATTAATCATTTTTCGACCCGAgaa > 1:885452/1‑237 (MQ=255)
ttGAAAAAATATCGCCGAATGTAACGAAAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATc < 2:550123/239‑1 (MQ=255)
tAACGAAAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGGGGGT‑TTTAGAACAGAAGTATTTCAGAAACCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTc < 2:1288178/239‑1 (MQ=255)
ttCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCCTTTTCTGCCTGGCg > 2:623175/1‑239 (MQ=255)
ttCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTCCTTTTTCTGCCTGGCg > 2:516911/1‑239 (MQ=255)
ttCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGAGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTCTTACGCATACCTGCCGCAATCCCGGCAAAAGTGACCATTAAACTATGTTTGCCTGGTGGACCCGGTCCCGGGCCTCCTTTTTCTGCCTGGCg > 1:508214/1‑239 (MQ=255)
tCCTTAAGGATTTGCGAAGTGTGATTAAGAATTGAAATAAAAAGCAACAAGAAATAAATTGAAAGCGGGGGT‑TATAAAACAGAATGTTTGTATAAAACC‑GCCGGGCCAAAGA‑CCGAGACTTTGGGGAAAAGGAAGT‑TTAGCGCGTATTACGCATCCCTCCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTGCCTGGCCTTCTTTTTCTGCCTGGCgg < 1:920783/239‑1 (MQ=255)
ttAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATCTATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CGCGCGAAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAg < 2:1145763/239‑1 (MQ=255)
ttAAGGATATCAGAAGGTATTTTCGAAATTTAAATAAAATGCAGACAGAAATATATTGAAAACGGGGGT‑GTTAGAACAGAAGAATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCATAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAg < 2:1013425/239‑1 (MQ=255)
ttAAGGAGATTTGAAGGAAATATAAAAAGTAGAAAAAATTGCAAACAAAAATA‑ATTGAAAAAGGGGGTGGTTAAAACAGAAGTTTGTAAGAAAACC‑CCCGCGAAAAACC‑CAGAGGGTTGGAAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGGGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAg < 1:430241/239‑1 (MQ=255)
aaGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGGATTACGCATACCTGCCGCAATCCCGGCAATAGTGGCCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTTTGCCTGGCGGGAggg > 2:639401/1‑237 (MQ=255)
tatCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGCGGGT‑GTTAGAACAGCAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGGgca > 2:488775/1‑239 (MQ=255)
atCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgca > 2:1139797/1‑238 (MQ=255)
tCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGCGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgcagc > 2:128835/1‑239 (MQ=255)
tCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGGGACAATTAACGCTTGTTCGACCCGAGGATCCGGTTCCTGGCCTTCTTTTTTTGCCTGTCGGGAGCGGAgcacg > 1:532574/1‑237 (MQ=255)
atgatatttaaaGATTTTTAATAAAAGGTAGACAAAAATATATGGAAAACGAGGGT‑GGATGAACAGAAGTATTCCAGAAACCC‑CTGCCGAAAAATC‑AGGCGGGTTGGCAGAAGAGGAATA‑TTCCACGGTAGTACGCATACCTGCCGCAATCCCGGCAATAGTGCCCATTAACGCTTGTTCGACGCGAGGACCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGAAACt < 1:128835/228‑1 (MQ=255)
ggTATATTCAGACTTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGA‑GTTAGAACAGAATGATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGAAAGA‑TTATCAGTGATTACGCATACCGAACGCAATCCCGGCAATAGTGACCATTAACGCTTGATTGACGCCAGGACGCGGTTCCCGCCCTTTCTTTTCTGCCTGCCGGGAGCgtggaaccaacccg > 1:818826/1‑226 (MQ=255)
ggTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGCGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGCGACCATTACAGCTTGTTCGACGCGGGGATCCGGTTCCTGGCCTGCTTTTTCTGCCTGGGGGGAGccggccgagaaaccg > 1:195786/1‑225 (MQ=255)
tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCgg < 2:971297/149‑1 (MQ=255)
tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCgg > 2:213384/1‑236 (MQ=255)
tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGGGCAGCAACTCgg > 2:1120489/1‑236 (MQ=255)
tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGACCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGccg > 2:537792/1‑238 (MQ=255)
tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGGTCCTGGCCTTCTTTTTCTGCCAGGGGGGGAGGGTGGAGCAAACCGGccc > 1:595261/1‑238 (MQ=255)
cAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCaa > 2:660403/1‑239 (MQ=255)
aaTTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATAc > 2:721823/1‑239 (MQ=255)
gAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGCGGATCCGGTTCCTGCCCTTCTTTTTCTGCCTGGCGGGAGCGGGGCAGCCACTCGGCCCGCAAAACGTTCa > 1:375268/1‑239 (MQ=255)
aaTAAAATGAAAAAAGAAATATATGGAAAAGGGGGGT‑GTTAGAAAAGAAGTATTACACAAACCC‑CCACCGCAAAGGC‑CCGGGGGTTTGAAGAAGGGGAAGA‑TTAGCCGTTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAg < 1:121526/239‑1 (MQ=255)
aaagggagacagaAATATATTGAAACCGAGGGT‑GTTAGAACAGAAGTATTTCAGAAACCC‑CTCGGGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCggg < 2:205046/233‑1 (MQ=255)
agacaggacaaaAAAATATTGAAAACGAGGGT‑GTAAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑CCGAGGGTTTGCAAAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGt < 2:507273/233‑1 (MQ=255)
aagccaaaaaaaaaTTTTTTGAAAACGGGGGT‑GGTAAAACGGAACTTTTTCAAAAACCC‑CTCCAGCAAACAC‑CCGAGGGTTTGCAGAAGAGGAAGA‑ATGGCCGGTTTTACGCATCCCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGt < 1:1120489/228‑1 (MQ=255)
aaTGCAGACAGAAATATTTTGAAAACGAGGGT‑GTTAAAACAGAAGTATTTCAGAAACCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGt < 2:375268/239‑1 (MQ=255)
aggCAGACAGAAATATTTTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTc < 2:362999/237‑1 (MQ=255)
aggCAGAAAGAAATATATTGAAAACGAGGTT‑GTTAGAACAGAAGATTTTCAGAAACCC‑CTCGCGAAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTc < 2:1020116/237‑1 (MQ=255)
agacagaAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGTTCGgtg > 2:734082/1‑239 (MQ=255)
acagaAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGCATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGGTCGACCCGAGGAACCGGTTCCTGGCCTTCTTTTTCTGCCTGGCTGGGGCGGTGCAGCAACTCGCGCTGCAATACGTTCAGCggtgcggggga > 1:289621/1‑230 (MQ=255)
aaattttgtaaaaagggtggT‑TTTAAAACAAAATTTTTACAAAAAACC‑CTCGGCAAAAAGC‑GCGGGGGTTTGCAAAAGGGGAAGT‑TTGGCCGGTTTTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGGCGCGAGGATCCGGTTCCTGGCCTTCCTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAata < 1:623175/221‑1 (MQ=255)
aaTATTTTGAAAACGGGGGG‑TTTAAAAAGAAATTATTCCGAAAAACC‑CCGGCGGAAAGGC‑GTGGGGTTTTGCAGAAGAGGAAAG‑TTCGCCGGTATTACGCATCCCTGCCGCCATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAat < 1:721823/237‑1 (MQ=255)
tatTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAACCC‑CTCGCCCAAAAGC‑ACGAGGGTTTGCAGAAGGGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCg < 2:282538/239‑1 (MQ=255)
tatTGAAAACGAGGGT‑GTTAGAAAAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCg < 2:1122502/239‑1 (MQ=255)
atTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACT‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAGGAGGAAGA‑TTAGCAGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGGTCCTGGCTTTCTTTTTCGCCCTGGCGCGCGCGCGGCAGCAACTCGGCCTGCAAAACGTTCAGCGGGTCgggggaacaaaagt > 1:507273/1‑225 (MQ=255)
atTGAAAACGAGGGT‑GTTAGAAAACAAGGATTGTAGAAAAAC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAATAGGAAGA‑TTATCCGGTATTCCGCATACCTGCCGCAATCACGGCCATAGTGACCATTCACGATTGTTCTAAGCGAGGAACCGGACCCTGGCCTTCTTTTTCTGCCTGTCGCGATCGGTGCCGCAACACGGCCTGCAATACGTTCAgggaggaggggagactatac > 1:1031238/1‑217 (MQ=255)
tGAAAACGAGGGT‑TTTAGAACAGAAGTATTACAAAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAAA‑TTAGCCGGTATTACGCTTACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAg < 2:176421/239‑1 (MQ=255)
tGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGGGTAAATATTCCGTa > 2:492570/1‑238 (MQ=255)
aaaaCGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTTCCTGGCGGGAGCGGTGCAGCAACTCCGCCTGCAATCCGTTCCGCGGGTGGGGGTAAAAATTcccga > 1:865508/1‑233 (MQ=255)
aaaaCGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGGGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAGCt > 2:1209339/1‑239 (MQ=255)
aaCGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGCCCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTATTTTTTTGCCGGGCGGGAGCGGTGGAGCAACTCGGCCCGCCATAAGTTCAGAGGGGAGGTGGAAATATTCCGTAGCTGa > 1:176421/1‑239 (MQ=255)
ggT‑GTTAGAACAGAATTTTTTCAGAAAACC‑CTAGCACAAAAGC‑CCGGGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATCCCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAGCTGAATAGa < 2:107987/238‑1 (MQ=255)
ggT‑GTTAGAACAGAAGTATTTCAAAAACCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATCCCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAGCTGAATAGa < 2:567912/238‑1 (MQ=255)
t‑gtTAGAACAGAAGTATTTCAGAAAGCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGAAAGA‑TTAGCCGGTATTACGCATCCCTGCCGCAAt < 2:392191/95‑1 (MQ=255)
t‑gtTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGCGCGGGCAAGCAACTCGGCCTGCAATACGTTCAGCGGGTGGGTGTAACGATTCCGTAGCTGAATAGaat > 2:1161008/1‑236 (MQ=255)
ttAAAACAAAATTTTTTAAAAAACCC‑CTC‑CGCAAAACCTACGAGGGTTTG‑AGAAAGGGAAAATTTAGCCGGTATTCCGCAGCCCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAGCTGAATAGACTCTg < 1:213384/239‑1 (MQ=255)
gAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGGGGCAGA‑TTAGCCGTTATTACGCATACCTGCCCCAATCTCGGCACTa > 1:392191/1‑95 (MQ=255)
gAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGGCCATTAACGCTTGTTCAACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGCACGGTGCAGCAAACCGGCCTGCAATCTGCTCACCGGGCTGGGGTAAAATTTCAGCAGCTGAAAAAGCTCTCCAATCCAc > 1:1019742/1‑239 (MQ=255)
aaGTATTTCAGAAACCC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGCCCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTACCTGGCGGGAGCGGGTCTGCAACTCGGCCTGCACTACTTTCATAGGGTCGGTGTAAATATTCCGAAGCGCAAAAGAGTCGGAAATCCACg > 1:561305/1‑239 (MQ=255)
aaGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTGGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGGGTAAATATTCCTTAGCTGAATAGATCCTGCAACCCACg > 2:74372/1‑239 (MQ=255)
|
AATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGT‑GTTAGAACAGAAGTATTTCAGAAAACC‑CTCGCGCAAAAGC‑ACGAGGGTTTGCAGAAGAGGAAGA‑TTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAACTCGGCCTGCAATACGTTCAGCGGGTCGGTGTAAATATTCCGTAGCTGAATAGACTCTGCAATCCACG > NC_000913/4150160‑4150630
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
