Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 495,599 T→G 10.4% G160G (GGT→GGG)  htpG → protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent, heat‑shock protein, ATPase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913495,5990TG10.4% 284.0 / 2.7 117G160G (GGT→GGG) htpGprotein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent, heat‑shock protein, ATPase
Reads supporting (aligned to +/- strand):  ref base T (41/58);  new base G (16/2);  total (57/60)
Fisher's exact test for biased strand distribution p-value = 2.02e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 118 total aligned reads displayed.

GCGTGGGGATGACCCGCGACGAAGTGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGACTCGTAACA  >  NC_000913/495364‑495831
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
gCGGGGGGATGACCCGCGACGAAGTGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGt                                                                                                                                                                                                                                              <  1:602468/236‑1 (MQ=255)
  ttGGGGATGACCCGGCACGAAGGGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAACCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGAGCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAAt                                                                                                                                                                                                                                          <  1:662727/237‑1 (MQ=255)
    ggggATGCCCCGCGGCGGAGTGTTTGTCCATCTGGGGAATATCGCTAAATCCGGGCCCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATaca                                                                                                                                                                                                                                       <  2:328781/239‑1 (MQ=255)
    ggggATGACCCGGCACGAAGTGATTGGCCATTTGGGGACTATCGCTAAAGCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATaca                                                                                                                                                                                                                                       <  2:2263/239‑1 (MQ=255)
          gACCCGCGACGAAGTGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGGCTTCTGGGAAACGGCTGGGGGAGGGGaaaaacccggcg                                                                                                                                                                                                                                 >  2:602468/1‑229 (MQ=255)
                     aagttatgtcccATCGGGGGGCTTCCGCTAAGTCCGTTAACAAAGAAGTCCTGGAATGCCTGGTTTCTGGCCAGGCGAAAGACATCCAGCTGATCGGTCAGTTTGGTGTGGGTTTCTACGTTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCAcc                                                                                                                                                                                                                     <  2:900548/229‑1 (MQ=255)
                                catttggggccatgcGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCGGCCCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCg                                                                                                                                                                                                          <  2:1297442/225‑1 (MQ=255)
                                caccgggggATTCTCGTCAAAACCGGTACCAAATCATTCCGCGATTCCCTGGGTTCTGACCAGCCGAAAGACAGCCAGCTGGTCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCg                                                                                                                                                                                                          <  2:1033928/234‑1 (MQ=255)
                                cATCTGGGGATTATTGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCCGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCg                                                                                                                                                                                                          <  2:433574/239‑1 (MQ=255)
                                cATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCg                                                                                                                                                                                                          >  1:865936/1‑239 (MQ=255)
                                cATCTGGGGACTACCGCTAAATCCGGTACCAAATTATTCCGCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTGCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCg                                                                                                                                                                                                          <  1:1340671/239‑1 (MQ=255)
                                cATCGGGGGACTAGCGGTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCg                                                                                                                                                                                                          <  1:1243730/239‑1 (MQ=255)
                                  tCTGGGGTCTATCCCTAAATCCGGTACAAAATCAGTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGCCAGCCAGCTGATCGGTAAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑g                                                                                                                                                                                                       <  2:1079989/239‑1 (MQ=255)
                                      gggACTTTCGCTAACACCGGTACCAAATCATTCCTCGGATCCCTGGGTTCTTACCAGGCGCAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCGACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTTGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTAc                                                                                                                                                                                                   <  1:1353507/239‑1 (MQ=255)
                                          cTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCCGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAAGGGAAAAAACCCTTGCCGAC‑AACACCaaaaaaaaggcgggaaacgaa                                                                                                                                                                                                >  2:672173/1‑224 (MQ=255)
                                            aTCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGTCGAAAAACCCGAAAATGGCGTCTTCTGGGAATCGGCTGGCGCAGGGGAATA‑ACCCCTTCCGACAACCACCAAaaaagacagcgggcagcaaa                                                                                                                                                                                               >  2:215197/1‑224 (MQ=255)
                                            aTCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAAt                                                                                                                                                                                             <  1:125882/239‑1 (MQ=255)
                                             tCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGTTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCCCGGCAGGCGCAAAACCAGAAAATGGCTGCTTCTGGGACTCGGCTGGCGAGGGTGAATACACCCGTGACGCC‑ATCACCaaaaaaaaaccggggacagaaaaa                                                                                                                                                                                             >  2:285634/1‑221 (MQ=255)
                                             tCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAACAACCAGAAAATGGCGTCTTCTGGGAATCGACTGGCGTAGTGGAATACACCGTTGCCCAC‑ATAACCAAAGAAGATCGT‑GGCACTGCAATc                                                                                                                                                                                            >  1:866041/1‑239 (MQ=255)
                                             tCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGCAGGGGAAAAACCCGTTGCCGGC‑AACACAAaacaaatcagtggaacggaaaaa                                                                                                                                                                                             >  2:742075/1‑221 (MQ=255)
                                             tCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCCCCAAAGAAGATCGT‑GGTACTGAAAt                                                                                                                                                                                             >  1:1042341/1‑238 (MQ=255)
                                             tCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGaa                                                                                                                                                                                               >  1:109171/1‑236 (MQ=255)
                                             tCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCCAAGGGGAAAACACCGTTTCCGAA‑AACCCCaaaaaaaaacgggggaaggaaaaa                                                                                                                                                                                             >  2:442862/1‑221 (MQ=255)
                                              ccgtAAATCCGGTACCAAATCATTCCCCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCCACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCa                                                                                                                                                                                           <  2:322527/236‑1 (MQ=255)
                                                   aaTCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGAAAAAACCGTTGCCGAA‑ATCACCAAAGAAGACCGG‑GGGACTGAAATCACCCt                                                                                                                                                                                       >  1:593302/1‑238 (MQ=255)
                                                      ccGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACCCTGCGTTTAGCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAGGATCGT‑GGTACTGAAATCACCCTGCAt                                                                                                                                                                                   <  1:115092/239‑1 (MQ=255)
                                                          tACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGGGTCTTCTGGGAATCGGCTGGCGAAGGGGAATACACCGTTGCCGAC‑AACTCCAAAAAAAATAGG‑GGGACCGAAAACAACCTGCaccgag                                                                                                                                                                               >  2:1313477/1‑234 (MQ=255)
                                                                  cATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTTTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGc                                                                                                                                                                      <  1:1299021/239‑1 (MQ=255)
                                                                   aTTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGCCAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCg                                                                                                                                                                     <  1:1008693/239‑1 (MQ=255)
                                                                    ttCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGAATACACCGTTGCCGAC‑ATCACCAAAAAAGATCGT‑GGTACTGAAATAACCCTGCATCTGC‑GTGAAGGcaa                                                                                                                                                                    >  1:941199/1‑237 (MQ=255)
                                                                    ttCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGGACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAACTAAGATCGT‑gg                                                                                                                                                                                                      >  1:602898/1‑206 (MQ=255)
                                                                        ctgAATTCCTGGGTTCTGACCAGGCGAAAGACCGCCAGCTGGTCGGTCAGTTTGGTGTTGGTTCCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGAc                                                                                                                                                                <  2:241325/237‑1 (MQ=255)
                                                                         cGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGAATACACCGTTGCCGGC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTCC‑GGTGAGGCGAAGaac                                                                                                                                                               >  1:326891/1‑237 (MQ=255)
                                                                            aTCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGGGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAg                                                                                                                                                             <  1:238692/238‑1 (MQ=255)
                                                                             ttccttgtttttGACCAGTCGAAAGCCAACCAGCTGATCGGTCATTTTGGTGTTGGTTTCTCCTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGtt                                                                                                                                                           <  2:1042341/228‑1 (MQ=255)
                                                                                        tGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGCCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACAACGTTGCCGCC‑ATCACCAAAGCAGCTCGG‑GGAAATGAAATCACCCTGCCTCCGA‑GTGGAGGCGAAGACGAGGTCCTCCAAGAcc                                                                                                                                                >  2:1290794/1‑238 (MQ=255)
                                                                                              ggCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGGC‑ATCCCCCAAGAA‑AACGTGGGGACTGAAATCACCCCCCACCTCC‑GGGAAGGGGAAACCGGGTTCCCCGATACCTgggggc                                                                                                                                          >  2:814397/1‑235 (MQ=255)
                                                                                              ggCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGCC‑ATCACCAAAGAAGATCGG‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGGGAAAACGAGTTCTTTGTTGACTGTcgcg                                                                                                                                          >  1:167037/1‑239 (MQ=255)
                                                                                               gCGAACGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAAAACACCGTTCCCGAC‑ATCACCACAAGAGATCGT‑GGGAATGAAATACCCCCGCATCTGC‑GTGAAGGGGAAAAAGGGTTACCGGATGACTGGcgcgg                                                                                                                                         >  2:732061/1‑238 (MQ=255)
                                                                                               gCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAc                                                                                                                                                                                                                            >  2:1318964/1‑159 (MQ=255)
                                                                                               gCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAc                                                                                                                                                                                                                            <  1:1318964/159‑1 (MQ=255)
                                                                                               gCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCgcgt                                                                                                                                         >  1:912596/1‑239 (MQ=255)
                                                                                               gCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGGAAACCCCGTTTCGGGC‑CTCACCCAAAAAAACCGT‑GGGACTGAAAAAACCCCCCAACTCG‑GGGAAGGCGAAGAAGAGGTcccccagaacatgggcgg                                                                                                                                         >  2:738051/1‑223 (MQ=255)
                                                                                                         gccagcTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCCCCAAAAAAGATCGT‑GGGACTGAAATCACCCTGCATCCGC‑GTGAAGGCGAAAACGAGTTCCCCGAAGACTGGCGGGGGGG‑TTCcata                                                                                                                              >  2:1126916/1‑238 (MQ=255)
                                                                                                         gccagcTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCAt                                                                                                                                                                                   <  2:43171/188‑1 (MQ=255)
                                                                                                         gccagcTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCAt                                                                                                                                                                                   >  1:43171/1‑188 (MQ=255)
                                                                                                            cgtttgccGGTTAGTTTGGTGTTGGTTTCTACTCGGGTTTTATGGTGGCCGAAAAAGTGACCGTGCGTACTCGCGCGGCAGGAGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCatcatc                                                                                                                           <  2:1365823/232‑1 (MQ=255)
                                                                                                            ccttGACCGGTCATTTTGTGGTTGGTTCCCTCTCGGCGTTTCCCGTGGCCGAAAAAGTGCCCCGGCGTACTCGCGCGGAAGGCGAAAAGCCAGAAAATGGCGTCTTCGGGGAATCGGCTGGAGAAGGTGGATACACCGTTGCCGAC‑ATCACCAAAGAATATCGT‑GGTACTGAAATCACCCTGCCTCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCatcatc                                                                                                                           <  2:221253/236‑1 (MQ=255)
                                                                                                               tGATCGGTCAGTTTGGTGTTTGTTTCTACTCTGCGTTTAGCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCatcatc                                                                                                                           <  1:215197/236‑1 (MQ=255)
                                                                                                               tGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCatcatc                                                                                                                           <  1:738051/236‑1 (MQ=255)
                                                                                                                taTCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGGAAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCa                                                                                                                       <  1:285634/238‑1 (MQ=255)
                                                                                                                 aTCGGTCAGTTTGGTGTTGGTTTATACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGGGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCa                                                                                                                       <  1:448699/238‑1 (MQ=255)
                                                                                                                  atgtggataagagacagggTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCaa                                                                                                                      <  1:64186/221‑1 (MQ=255)
                                                                                                                           ttGGTGTTGGGTTCTACTCTGCGTTTAACGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGGCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGa                                                                                                             <  1:785788/238‑1 (MQ=255)
                                                                                                                                   ggTTTCTACTCTGCGTTTAGCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATcgc                                                                                                    <  1:1126916/239‑1 (MQ=255)
                                                                                                                                    gTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGCAGGTCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGGG‑TTCCACACTCAGCAAATACTCCGACCATATcgc                                                                                                    >  1:1200569/1‑238 (MQ=255)
                                                                                                                                    gTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATAAACCGTTGCCGAC‑ATCACCAAAAAAGATCGG‑GGGACGGAAATCACCCTGCA‑CTCCGGGGAAGGCGAAGACGGGTTCCCCGATGCAGGGCCCG‑GCGCGTCCCTCATCAGCaaaaaacccgcccacacgcgg                                                                                                   >  2:1272362/1‑221 (MQ=255)
                                                                                                                                     tttCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATcgcg                                                                                                   <  1:524024/238‑1 (MQ=255)
                                                                                                                                     tttCTACTCTGCGTTTATCGGGGCCGACAAAGGGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATcgcg                                                                                                   <  1:535107/238‑1 (MQ=255)
                                                                                                                                      ttCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCgcgc                                                                                                  <  1:814397/238‑1 (MQ=255)
                                                                                                                                      ttCTACCCTGCGTTTTCCGGGGCCGGAAAAGTGACCGTGGGTACCCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCCGGGAATCGGCTGGCGAAGGTGAATACACGGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCCCCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCgcgc                                                                                                  <  2:1221742/238‑1 (MQ=255)
                                                                                                                                        cTACTCTGCGTTTATCGGGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGc                                                                                               <  1:104839/239‑1 (MQ=255)
                                                                                                                                         tACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCCTCAGAAAATAACCCGACCaattcccgcgtcc                                                                                              >  1:1303239/1‑227 (MQ=255)
                                                                                                                                              tGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGCAATCACCCTGCATCTGC‑GTGCAGGCGAGCACGAGTTCCTCGTTGGCTGGCGCGTGCG‑TTCCATCACCACCAAATACTCCGACCATATCGCGCTGCCGGTag                                                                                         >  1:682991/1‑239 (MQ=255)
                                                                                                                                              tGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCca                                                                                                                                >  1:1201029/1‑200 (MQ=255)
                                                                                                                                              tGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATAACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGGTGAATGGCGCGGGGG‑TTCCATCATCAGCAAAAACCCCCACCCAAACCCGCGGCCggggg                                                                                         >  2:524024/1‑236 (MQ=255)
                                                                                                                                                cGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCCCTGCCGGTagag                                                                                       >  1:1268336/1‑239 (MQ=255)
                                                                                                                                                cGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGAATACACCGTTGCCGAC‑ATCCCCAAAGAAGATCGT‑GGTAATTAAATCACCCTGCCTCTGC‑GTGAAGGCGAAGACGAGTGCCCCGATGACTGGCGGCGGCG‑GTCCCACCTCAGCAAATACCCCACCCataacagccggccgggaaga                                                                                       >  2:1320504/1‑222 (MQ=255)
                                                                                                                                                     aTCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTAATGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACGGGCGCGGGGG‑TTCCATCATCAGCAAAAACTCCGACCATATCCGACTGCCGGTAGAGATCGa                                                                                  >  1:511272/1‑239 (MQ=255)
                                                                                                                                                          ggCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCCTATCGCGCTGCCGGTAGAGATCGAAAAAc                                                                             >  1:940949/1‑239 (MQ=255)
                                                                                                                                                          ggCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGGGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTCGGGGTCGaaaaa                                                                              >  1:288217/1‑238 (MQ=255)
                                                                                                                                                          ggCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGGGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCCATGACTGGCGCGGGGG‑TTCCATCATCAGCAAAAACTCCCACCACATCGGCCGCCCGGCAGAGAACAAAAAAc                                                                             >  2:827203/1‑239 (MQ=255)
                                                                                                                                                          ggCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAAGTGCATACACCGTTGCCGAC‑ATCACCAAAGAAGATAGT‑GGGACTAGAATCACCCTGCATCTCG‑GTGAAGGGGAAAACGAGTTTCTCGATGACTGGGCCGAGCG‑GTCCACACTCAGCAAAAAAACCAACCAAAACGGGCGCCCGGgagagaggaaaaaaa                                                                             >  2:574665/1‑230 (MQ=255)
                                                                                                                                                            ccaaCAAAGTGACCGGGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAAcg                                                                            <  2:469927/235‑1 (MQ=255)
                                                                                                                                                             cggcAAAGTGACCGTTGGTACTCCCGGGGCAGGGGAAAAACCAGAAAATGGGGTCTTCTGGGAATCGGCTGGCGAAGTGGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAAcgcg                                                                          <  2:288217/236‑1 (MQ=255)
                                                                                                                                                                           tGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCTCCGGCAAAAACTCCGACCATACCGGCCCGCCGGTAGAGATCCAAAAACCAGAAAAAAAAGagagg                                                            >  2:694853/1‑235 (MQ=255)
                                                                                                                                                                           tGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATGGAACAACGCGAAGGGAAAGAAGGc                                                            >  1:184692/1‑239 (MQ=255)
                                                                                                                                                                           tGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATAAGCAAATACTCCGACCATATACCGCTGCCGGTAGAGATCGCAAAACGCGAAGAGAAAGACggg                                                            >  1:130568/1‑238 (MQ=255)
                                                                                                                                                                             tgttttCGTGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAACCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGa                                                          <  2:120335/234‑1 (MQ=255)
                                                                                                                                                                             cGTACCCGCGGCGCAGGCGAAAAACCAGAAAATGGCGTCTTCCGGGAATCGGCTGGGGAAGGTGAATACCCCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGa                                                          <  2:593302/239‑1 (MQ=255)
                                                                                                                                                                             cGTACCCGCGCGGCCGGGGAAAAACCAGAAAAGGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACCCCGTTGCCGAC‑ATCACCAAAGAGGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGa                                                          <  2:1327597/239‑1 (MQ=255)
                                                                                                                                                                              ttcctcccccgcagggCGAAAAACCAGAAATTGGGGTTTTCTGGGAATCGGCTGGCGAAGGTGAATCCACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCGCCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGGCTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGa                                                          <  2:682991/224‑1 (MQ=255)
                                                                                                                                                                                aCTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATCCACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGaaa                                                        <  1:732061/238‑1 (MQ=255)
                                                                                                                                                                                     cgcgGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCCTCCTCAGCAAATACTCCGCCCATATCGCGCTGCCGGGAGAGATCGAAAAACGCCAAGAGAAAAACGGCGAAACCGTTa                                                  >  2:873403/1‑239 (MQ=255)
                                                                                                                                                                                           aGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTcc                                             <  1:742075/238‑1 (MQ=255)
                                                                                                                                                                                                aaaaaCCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGGGTTCCTCGCTGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGAACGAAAAAACCGAAGAAAAAAACGGCGAAAACGtacaccccaggggg                                       >  2:633686/1‑226 (MQ=255)
                                                                                                                                                                                                 aaaaCCAGAAAATTGCGGCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGGTGCCGAC‑ATCAACAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGgag                                       <  1:509004/238‑1 (MQ=255)
                                                                                                                                                                                                 aaaaCCAGAAAAGGGCGTCTTCTGGGAATGGGCTGGGGAAGGTGAATACCCCGTTGCCGAC‑ATCACCAAAGAAGATAGT‑GGTAATGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGgag                                       <  1:1284977/238‑1 (MQ=255)
                                                                                                                                                                                                     cccaaaaaTGGCGTTTTCGGGGAATCGGCTGGCGGAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAAt                                  <  2:380946/235‑1 (MQ=255)
                                                                                                                                                                                                                cGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGCGATCGAAAAACGCGAAGAGAAAGTCGGCGAAACCGTTATCCCCTGGGGGCAAATCAAAAAAacgc                       >  1:739217/1‑239 (MQ=255)
                                                                                                                                                                                                                cGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATTTCCTGGGAGAAAATCAACAAAgcgc                       >  1:996762/1‑239 (MQ=255)
                                                                                                                                                                                                                cGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAccg                        >  1:380946/1‑238 (MQ=255)
                                                                                                                                                                                                                    ttctGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCCCGCTGCCGGTAGAGATCGACAAACGCGAAGAGAAAGACGGCGCAACCGTTATCTCCTGGGAGAAAATCAACAAAGAGCAGgc                   >  1:1288230/1‑239 (MQ=255)
                                                                                                                                                                                                                          gaactggttGGGGAAGGTTAATACACCGGTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCtgt              <  2:580195/230‑1 (MQ=255)
                                                                                                                                                                                                                           aaacggcggGGGAAGGTGAATACACCGGGGCCGAC‑ATCACCAAAGAAGAGCGT‑TGTACTGAAATCACCCTGCATCTGC‑GCGAAGGCGAAGACGAGTTCCTTGATGACTGGCGCGTGCG‑TTCCATAATCAGCAAATACGCCGCCCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCtgtg             <  2:866041/235‑1 (MQ=255)
                                                                                                                                                                                                                             tCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGG‑GGTACTGAAATCAACCTGCATTTGC‑GTGAAGGCTAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCAACAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGa           <  1:812508/238‑1 (MQ=255)
                                                                                                                                                                                                                              cGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCg                                                           >  1:57375/1‑189 (MQ=255)
                                                                                                                                                                                                                                   ggggAAAGTGAAAACACCGTGGCCGAC‑ATCAACAAAGAAGATCGT‑GGTACTGAAATCACCCTGGACTTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGACTCGTaa    <  2:206864/236‑1 (MQ=255)
                                                                                                                                                                                                                                    gCGAAGGTGAATACCCCGTTGCCGGC‑ATCACCAAAGAAGATCGG‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGACTCGTAAc   <  2:184692/239‑1 (MQ=255)
                                                                                                                                                                                                                                     cGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCCTCATCAGCAAATACTCCGCCCATATCACGCTGCCGGGAGAGATCGCAAAACGCGAAAAGAAAGACGGCGAAAACGTTTTTTCCCGGGGGAAAATCCAAAAAGCGCAgggccctgtgcaccccaaca  >  2:418660/1‑221 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
GCGTGGGGATGACCCGCGACGAAGTGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGAC‑ATCACCAAAGAAGATCGT‑GGTACTGAAATCACCCTGCATCTGC‑GTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCG‑TTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGACTCGTAACA  >  NC_000913/495364‑495831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A