Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,614,336 T→C 14.3% E123G (GAG→GGG)  sad ← succinate semialdehyde dehydrogenase, NAD(P)+‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,614,3360TC14.3% 237.8 / 7.4 104E123G (GAG→GGG) sadsuccinate semialdehyde dehydrogenase, NAD(P)+‑dependent
Reads supporting (aligned to +/- strand):  ref base T (55/32);  new base C (4/12);  total (59/45)
Fisher's exact test for biased strand distribution p-value = 5.95e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 104 total aligned reads displayed.

TAATCATCTGACTGACACCGTCGTTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGATAATCTATATTTGTCTCG  >  NC_000913/1614103‑1614566
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                      
tAATCATCTGACTGACACCGTCGTTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCCCGCATCCCCTG‑CCCTAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCCTCCCCAAC‑GGCCGAAACCCaaaa                                                                                                                                                                                                                                   >  2:162631/1‑237 (MQ=255)
          actgacACCGTCGTTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑CCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGCCCCCAAC‑GCACGATACCCAAAAACCCCctgca                                                                                                                                                                                                                         >  2:239340/1‑238 (MQ=255)
               cacCGTCGTTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGAttt                                                                                                                                                                                                                    >  1:330293/1‑239 (MQ=255)
                 ccGTCGTTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCACC‑GGTCGATACTCAATAACCGCCTGCTGCtttt                                                                                                                                                                                                                   >  1:930326/1‑238 (MQ=255)
                    tcgtTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGCAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGAAACTCAATAACCGCCTGCTGGTTTTgcac                                                                                                                                                                                                               >  1:562579/1‑239 (MQ=255)
                    tcgtTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGCAACTCAATAACCCCCCCCTGATTTTcca                                                                                                                                                                                                                >  2:896450/1‑238 (MQ=255)
                    tcgtTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCCCCTGCTGATTTTccc                                                                                                                                                                                                                >  1:1009008/1‑237 (MQ=255)
                    tcgtTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACCCAATAACCGCCTCCTGATTTTcca                                                                                                                                                                                                                >  1:815125/1‑238 (MQ=255)
                    tcgtTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCCGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGTAT‑GATGCGACAA‑GCCCCACGCATCACCTG‑CCATCACGGAAAATTCCACGGCATAAACGCCCGA‑ATCTTCCCCAAC‑GGTCGCTACTCAATAACCACCTTCTGAATTTcca                                                                                                                                                                                                                >  2:660975/1‑238 (MQ=255)
                     cgtTGTCGGCATTCAGCCAGCCATATACGCCTTGGGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTccacc                                                                                                                                                                                                              <  1:827017/239‑1 (MQ=255)
                          tCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTT‑CCCTAACGGTCAATTTCACGGCATAATAGCCATA‑ATCGTCCCCCAC‑GGTCGATACTTCAAAACCGCctccggccttttcacacccgt                                                                                                                                                                                                         >  1:986918/1‑220 (MQ=255)
                               atccctccccccaTATACTCCTTGGGGGCTACCCCCATCTTTAACACCCTGGGAAAGGACGTGTG‑CCAAGCCCAACCCATGCGGGGCG‑GTTTTAGGTACGAAGCGCTTCTCTGAAAGAAT‑GATGGGAACA‑GCCCCACGAATACCCTG‑CAATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑TGTCGATATTCAATAACCGCCTGCTGATTTACCACCAGCGTAGGtt                                                                                                                                                                                                    <  2:936846/229‑1 (MQ=255)
                                    gccagccaTATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGCCAATGAGCTGTG‑CACAGCCCATCCCATTCGGCGCA‑TGTTTAAGTACGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCAACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑CGGCCATACTCACAAACACCCGGCTGATTTTCCACTACCGAAGGTTCCg                                                                                                                                                                                                 >  1:567417/1‑237 (MQ=255)
                                                   tgtgggggaaccccctaattttAACCCCCTGGGAAATGGGCGGGC‑CACCGCCAATC‑CATTTGGCGGAGTGTTTAAGTAAGAAGCCGTTCCCTG‑AAGAATGGATGGGAACA‑GCCCCCCGCATCCCCTG‑CCATAACGGAAAATTCCCCGGCATAATCGCCAGA‑ACCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGa                                                                                                                                                                                <  2:1040982/220‑1 (MQ=255)
                                                   cTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCgg                                                                                                                                                                                 >  1:1067262/1‑238 (MQ=255)
                                                   cTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGCCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGGAGGTTCCGCCTTCACAATTCCCgg                                                                                                                                                                                 >  2:1320661/1‑238 (MQ=255)
                                                   cTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGCCCCCAAC‑GGTCGATACTCAATAACCACCTGCTGCTTTTCCACCACCGTAGGTTCCGCCTTCAGCCTTGCCgg                                                                                                                                                                                 >  1:615150/1‑238 (MQ=255)
                                                   cTTGGGGTATTCCCGTATTTTGAAACCCCGGGGAAATGGGCTGTG‑CACAGCCCTTCACTTTCGGCCCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCCCCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGa                                                                                                                                                                                <  1:772223/239‑1 (MQ=255)
                                                    ttGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGCAAATTCCACGGCATAATCGCCAGA‑ATCGTACCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGCAGGTTCCGCCTTCAGCATTGCCGGa                                                                                                                                                                                >  1:939003/1‑238 (MQ=255)
                                                     tgtgGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GTTGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCCTAATCGCCAGA‑ATCGTCCCCAAC‑GGGCGATACTCAATAACCGCCTGCGGCTTTTCCACCAGCGTTGGTTCCCCCTTCAGCATTGCCGGAcc                                                                                                                                                                              >  1:1260010/1‑239 (MQ=255)
                                                      gtgGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTc                                                                                                                                                                                            >  2:207692/1‑224 (MQ=255)
                                                      gtgGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTc                                                                                                                                                                                            <  1:207692/224‑1 (MQ=255)
                                                      gtgGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCacccatcccgggcca                                                                                                                                                                             >  1:462285/1‑225 (MQ=255)
                                                       tgGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCAt                                                                                                                                                                            >  1:901861/1‑239 (MQ=255)
                                                        gggtctccccattCTTT‑AACACCTTGGGAAAGAGCCGTGCCACCGCCCCTCCCATCCGGCGAT‑TTTTTATGTAAGTGCCCGTTCCTTAAAAAAAT‑GAGGGGAAAC‑GCCCCACGCATCCCCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATg                                                                                                                                                                           <  2:1009008/227‑1 (MQ=255)
                                                         ggcaaCCCTCATCTTTAAACCCCTGGGCAATGGGCTGTG‑CACAGCCCATCCCATGCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAATAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATg                                                                                                                                                                           <  1:405383/234‑1 (MQ=255)
                                                         gaaTACCCGCATTTTAAAACCCTGGGGCAATGAGCCGGG‑CACAGCCCATCCCATCCGGCGCA‑TGTTTAATTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATg                                                                                                                                                                           <  1:896450/236‑1 (MQ=255)
                                                                 gCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCACCATTGCCGGACCATGTTCTGCAt                                                                                                                                                                   >  1:534025/1‑238 (MQ=255)
                                                                      tttAACCTCCTGGGTAATGTG‑TCTGCCACAGCCCATCACTGTCGGCGCA‑TGTTAAAGTAAGGAGCCGTTTCCGTAAAGAAT‑CAGGGCAAAA‑GCGCCAGGCATCACCGA‑CCATAACGGAAAATGCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGt                                                                                                                                                             <  2:462285/239‑1 (MQ=255)
                                                                      gttacaaccgtGGGCAATGGGCGTGG‑CAGACCCCTGCACGTTCGACGAT‑AGTTTAAATAAGTGGCGGTCACATGCAAGAAT‑GATCGGAACA‑GCGCCCAGCCTCCCCGG‑CCATAACGGAAAATTCCACGGCAAAATCGCCAGA‑TTCGTCCCCAAC‑GGTCGATACCCAAGAACCGCCTTCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGt                                                                                                                                                             <  2:567417/229‑1 (MQ=255)
                                                                               cTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGTTACTCAATAACCGCCTGCTGATTTTCCACCACCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCAGACCAGTCACACAAAt                                                                                                                                                    >  1:544900/1‑239 (MQ=255)
                                                                               cTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCTCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCACCATTCCCGGACCATGTTCTCCCTACCCGCCACACAAAt                                                                                                                                                    >  2:781988/1‑239 (MQ=255)
                                                                               cTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GACCGCTACTCAATAACCGCCTGCTGCTTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATTGTCTGCAAACCAGACCCCCAAAt                                                                                                                                                    >  2:1085855/1‑239 (MQ=255)
                                                                                 gggCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCCGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGCTTTTCCACCAGCGAAGGTTCCGCCTTAAGCAATGCCGGAACAATTTCTGCATAACAGACAAACAAATTc                                                                                                                                                  >  2:1237562/1‑239 (MQ=255)
                                                                                  ggCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCCTAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATCCCCAATAACCGCCTGCTGATTTTCCACCACCGTAGGTTCCGCCTTCAGCATTCCCGGCCCATGTCCTGCATACCAATCACCCCAAtta                                                                                                                                                  >  2:700611/1‑237 (MQ=255)
                                                                                       tGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATAc                                                                                                                                                                 >  1:1047350/1‑218 (MQ=255)
                                                                                       tGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTcacacttgtctcttata                                                                                                                                            >  1:379092/1‑227 (MQ=255)
                                                                                       tGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGAt                                                                                                                                            >  1:432962/1‑239 (MQ=255)
                                                                                           ttggg‑CAAAGCCCATACCATTGGGCCAA‑TGTTTAAGTAAGTACCCGTTACCGGCAAAAAT‑GATGGGAAAA‑GCGCCCCGCACCCCCGG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCGGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCg                                                                                                                                        <  1:633735/235‑1 (MQ=255)
                                                                                            tgtt‑CAAAGCCAATCCCATCCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGAAAGAAT‑GATGGGAACA‑GCGCCACGCATCCCCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCg                                                                                                                                        <  1:1057094/238‑1 (MQ=255)
                                                                                            tgtg‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCCTAATCGCCAGA‑ATCGTCCCCAAC‑GGCCGATAATCAATAACCGCCTGCTGCTTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTTCCGGACCATGTTCTGCCTACCAGTCAAACAAATTCGCCGATTTCg                                                                                                                                        >  2:693920/1‑238 (MQ=255)
                                                                                              tg‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATTTTCTGCAAACCAGTCAAACAAATCCGCCGATTTCGcc                                                                                                                                      >  2:624133/1‑238 (MQ=255)
                                                                                              tg‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTACCACAAATTCCCCAATTTcccc                                                                                                                                      >  2:363243/1‑238 (MQ=255)
                                                                                              tg‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGACATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCGGTTGATTTTCCCCCAGCGTAGGTTCCGCCTTCAGCATTCACGGCACATGTTCTGCATACCACTcaccaaaacttccccatttccgc                                                                                                                                      >  2:1300905/1‑218 (MQ=255)
                                                                                                      cccATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGGTACTCAATAACCGCCTGCTGCTTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCCCCAATTTCCCCCCCTCAgc                                                                                                                              >  2:1355702/1‑239 (MQ=255)
                                                                                                      cccATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGCTTTCTCCACTTCAgc                                                                                                                              >  1:1147145/1‑239 (MQ=255)
                                                                                                      cccATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAg                                                                                                                               >  1:166617/1‑238 (MQ=255)
                                                                                                        ccctccccttcggccattttttAAGTAAGGAGCCGTTACCTCAAAAAAT‑GATGGGAACG‑CCCCCCCTCACCCCCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTTCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAgcg                                                                                                                             <  2:545719/220‑1 (MQ=255)
                                                                                                         aTCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAgcgc                                                                                                                            >  1:123881/1‑238 (MQ=255)
                                                                                                         aTCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCACCATTGCCGGACCATGTTCTCCATACCAGTCACCCAAATTCGCCCATTTCCCCCCCTCAgcgcg                                                                                                                           >  2:1354047/1‑239 (MQ=255)
                                                                                                           cacaTTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCCCTTCAgcgcgc                                                                                                                          >  1:781547/1‑238 (MQ=255)
                                                                                                             attgcGGCGCT‑TTTTTAAATAAGTGCCCTTTTCCGAAAAAAAT‑GATGGGAACC‑GCGCC‑CCCACCCCCCGACCATAACGGAAAATTCCCCGGCAAAATCCCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGcc                                                                                                                       <  2:123881/235‑1 (MQ=255)
                                                                                                                tCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATCCCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCCCGCGCCTgg                                                                                                                    >  1:933973/1‑239 (MQ=255)
                                                                                                                tCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTCCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCACCGCGCGCCTgg                                                                                                                    >  1:481314/1‑239 (MQ=255)
                                                                                                                           ttttAGTAATTAGCCTTTCCCTGCAAGATT‑GATGGGAACA‑GCGCCCCGCAACCCCTG‑CCAAAACGGAAAATTCCACGGAATAATCGCCAGA‑ACCGTCCCCAAC‑GGTCGATACTCAAAAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGtt                                                                                                          <  2:330293/239‑1 (MQ=255)
                                                                                                                           tttAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGAAACG‑GCGCCCCGCATCACCTG‑CCAAAACGGAAAATTCCCCGGCATAATCGCCAGA‑ATCGTCCCAAAC‑GGTCGATACCCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGtt                                                                                                          <  1:665628/239‑1 (MQ=255)
                                                                                                                                    gtaGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGCTTGGTTTGCCCAtt                                                                                                  >  1:331655/1‑238 (MQ=255)
                                                                                                                                    gtaGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGACGATACTCAATAACCGCCTGCTGGTTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCCTCTTCTGCATCCCAGTAACACAAATTCGCCGAATTGGCCCCTTAAGAGCCCGCCTGGTTGATTGGATTGCCCAtt                                                                                                  >  2:258433/1‑238 (MQ=255)
                                                                                                                                     taGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTc                                                                                                >  1:1058480/1‑239 (MQ=255)
                                                                                                                                      acccGTTACCTGAAAGAAG‑TATGGGAACA‑GGCCCCCGCCTCCCCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTc                                                                                                <  1:700611/236‑1 (MQ=255)
                                                                                                                                      aGCCGTTTCCTGAAAGAAT‑GATGGGAACA‑GCGCCACGCATCCCCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTcg                                                                                               <  1:624133/239‑1 (MQ=255)
                                                                                                                                      aGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACCCAAATTCCCCGATTTCGCCCCTTCAGCGCGCGCCTGGTTGATAGGTTTGCCCATTTcg                                                                                               >  2:278255/1‑239 (MQ=255)
                                                                                                                                                  cAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGGGACCAtt                                                                                   >  1:1012890/1‑239 (MQ=255)
                                                                                                                                                      aaatagggggAACACGCCCCCCGCACCCCCTC‑CAATAACGGAAAATTCCCCGGCATAACCCCCAGA‑ACCTCCCCCAAC‑GGTCGATCCTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTg                                                                                 <  2:1283538/232‑1 (MQ=255)
                                                                                                                                                           gtgGGAACA‑GCGCCACGCATCCCCTG‑CCATAACGGAAAATTCCACGGCAAAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCAtt                                                                                   <  1:143023/230‑1 (MQ=255)
                                                                                                                                                             gggAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACGAATTCGCCGATTTCGCAACTTAATCGCGCGCCTGGTTGATTGGTTTGCCCATTTCACGGGGTGTCATTTGCGCCAtt                                                                          >  1:135725/1‑238 (MQ=255)
                                                                                                                                                                gaaagcgccccgccctccccTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATttc                                                                        <  1:838431/220‑1 (MQ=255)
                                                                                                                                                                      cgcCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGTTTGGTTTGCCCATTTCTCGGGGGATCATTTGCGCCAttt                                                                         >  2:143023/1‑231 (MQ=255)
                                                                                                                                                                      cgcCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGCTTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTa                                                                 >  2:569803/1‑239 (MQ=255)
                                                                                                                                                                      cgcCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGGGATCATTTGCGCCATTTCTTCGCt                                                                  >  1:293274/1‑238 (MQ=255)
                                                                                                                                                                      cgcCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGGGATCATTTGCGCCATTTCTTCGCt                                                                  >  1:402171/1‑238 (MQ=255)
                                                                                                                                                                       cccaccaaTCCCCTG‑ACAAAACGGAAAATTCCACGGCATAATCGCCAGA‑ACCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGc                                                                   <  1:693920/229‑1 (MQ=255)
                                                                                                                                                                          ccggctccacaggcaaagccGGAAAATTCCCCGCAATCGTCGCCAGC‑ATCTTCCCCAAC‑GTGAGAAACCAAATATCGGCCTGCTGATTTTCCACCACCGTAGGTTCCGCCTTCAGCGTTGCCGGACCATGTTCTGCCTACCAGTCACACAAATTCGCCGATTGCGCCACTCCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGa                                                              <  2:562579/220‑1 (MQ=255)
                                                                                                                                                                          accgccccccTT‑CCATAACGGAAAATTCCCCGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAg                                                             <  1:242306/231‑1 (MQ=255)
                                                                                                                                                                               tccccTG‑CTAAAACGGAAAATTCCCCGGCACAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATCCTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAgcgcgc                                                        <  2:382304/236‑1 (MQ=255)
                                                                                                                                                                               tacccTG‑CCATAACGGAAAATTCCACGGCATAAGCCCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGTGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAgcgcgc                                                        <  1:828990/236‑1 (MQ=255)
                                                                                                                                                                               ctccccgcccAAAACGGAAAATCCCCGGGCCTAATCGCCAGC‑ACCGCCCCCAAC‑GGTCGATCCCCAATAACCGCCTGCTGATTTTCCCCCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAgcgcg                                                         <  2:1058480/231‑1 (MQ=255)
                                                                                                                                                                                ccccTG‑CCATAACGGAAAATTCCACGGCATAATCCCCAGA‑ATCGCCCCCAAC‑GGTCGACTCCCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCa                                                       <  1:1061535/237‑1 (MQ=255)
                                                                                                                                                                                cACCTG‑CCATAACGGAAAATTCCACGGCATAACCGCCAGA‑ATCGTCCCCAAC‑GGTCCATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCa                                                       <  1:951804/239‑1 (MQ=255)
                                                                                                                                                                                cACCTG‑CCAAAACGGAAAATTCCACGGCCTAAGCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCa                                                       <  1:1320661/239‑1 (MQ=255)
                                                                                                                                                                                   cTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTCCGAGCGCGCaga                                                     >  1:272020/1‑238 (MQ=255)
                                                                                                                                                                                    tG‑CCATAACGGAAAATTCCAAGGCTTAATTGCAAGA‑TTCGTCCCCAAC‑GGTCGATACTCAATACCCTCCTGCTGATTTTCCACCAGCGGAGGTTCCGCCTTCAGCATTGCCGGACCATTTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGc                                                   <  1:678514/239‑1 (MQ=255)
                                                                                                                                                                                    tG‑CCAAACCGGAAAATTCCCAGGCATAATCGCCAGA‑ATCGGCCCTAAC‑GGTCGATACCAAATATCCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGc                                                   <  1:597613/239‑1 (MQ=255)
                                                                                                                                                                                            ccgtaaatTTCCCCGGCATAA‑CGCCACATATCGCCCCCATC‑GGTGCATTCTCAAAAACCGCCTGGTGATTTCCCCCCCGCGTAGGGTCCGCCTTCAGTATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCg                                            <  2:331655/235‑1 (MQ=255)
                                                                                                                                                                                                  aaTTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATc                                       >  1:916753/1‑238 (MQ=255)
                                                                                                                                                                                                  aaTTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCCCGGGGGATCATTTGCGCCCTTTTTTCGCTACGAGCGCCCAGAGCCTTACGGaaatac                                      >  2:1210197/1‑237 (MQ=255)
                                                                                                                                                                                                  aaTTCCACGCCATAATCCCACTA‑ATCG‑CCCCAACAGGGCGACACCCAAAACCCGCCTGCTGATTTTCCGCCAGGCGAGGTCCCGCCTCTAGCATTGCCGGACCATGTTCTGCATTCCAGGCACACAAATGCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCa                                      <  2:834618/239‑1 (MQ=255)
                                                                                                                                                                                                    ttCCCCGGCATAACCCCCAGA‑ATCGTCCCACAC‑GGTCGATACCCAATAACCGCCTGCTGATTTTCCCCCAGCGGAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACg                                    <  2:293274/239‑1 (MQ=255)
                                                                                                                                                                                                             aTAATCGCCAGA‑ATCGTCCCCACC‑GGTCGATACCCAATAGCCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGGTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGttttt                            <  1:278255/238‑1 (MQ=255)
                                                                                                                                                                                                               aaTCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACCCAATAACCGCCTGGTGATTTTCCACCAGCGTAGGGTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAg                         <  1:821014/239‑1 (MQ=255)
                                                                                                                                                                                                                   cccAAA‑ACCGCCCCCATC‑GGCCGATCACAAATACCCGCCGGTTGTTTTCCCACCAGGGTGGGTGCCGCCTGTAGCATTGCCGGATCATTGGCTGCATACCAGTCACACAAATTCGCCGATGGCGCCACCTCAGCGCGCGCATGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACg                     <  2:815125/238‑1 (MQ=255)
                                                                                                                                                                                                                     ccctcaTCGTCCCCAAC‑GGCCGTTCCACACAACACCCCTGCTGAGTTCCCACCAGCGTAGGTTCCGCCTTGCGCATTTCCGGCCCATTTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTGCAGCGCGCGCCTGGTTGATTGGTGTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGa                    <  2:939003/234‑1 (MQ=255)
                                                                                                                                                                                                                     ccaaactccgccccAAC‑GGGCAAGACCAAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATTCCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAACGCGAAGAGGGCTACCGATATCACGCAGTTTTTCAGCACGa                    <  1:1300905/229‑1 (MQ=255)
                                                                                                                                                                                                                       aaaaccGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCCCCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATTCCAGTCACACAAATTCGCCGATTCCGCCACTTCAGCGCGCGCCTGGGTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGATa                  <  1:239340/234‑1 (MQ=255)
                                                                                                                                                                                                                         attcccccccAAC‑GGTTGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTAAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATTATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGATAAt                <  2:534025/233‑1 (MQ=255)
                                                                                                                                                                                                                          accccccccAAC‑GGGCGTTACTCAATAACCCCCTGCTTATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGATAATc               <  2:1262703/234‑1 (MQ=255)
                                                                                                                                                                                                                              tCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCa                          >  1:474943/1‑224 (MQ=255)
                                                                                                                                                                                                                              tCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGATAATCtata           >  1:286157/1‑239 (MQ=255)
                                                                                                                                                                                                                              tCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCCACGAGCGCGCAGAGCCTTACCGATATCACGCCGTTTTTAAGCACGAAAATccaaa           >  2:1269351/1‑235 (MQ=255)
                                                                                                                                                                                                                                         tCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTAGCCACTTCAGCGCGCGCCTGGTTGCTTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGCTATACCGCAGTTTTTCAGCCCGATAATCTATATTTGCCTcg  >  1:1374228/1‑238 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                      
TAATCATCTGACTGACACCGTCGTTGTCGGCATTCAGCCAGCCATATACGCCTTGTGGGATACCCGCATCTTTAAACACCTGGGCAATGAGCTGTG‑CACAGCCCATCACATTCGGCGCA‑TGTTTAAGTAAGTAGCCGTTACCTGCAAGAAT‑GATGGGAACA‑GCGCCACGCATCACCTG‑CCATAACGGAAAATTCCACGGCATAATCGCCAGA‑ATCGTCCCCAAC‑GGTCGATACTCAATAACCGCCTGCTGATTTTCCACCAGCGTAGGTTCCGCCTTCAGCATTGCCGGACCATGTTCTGCATACCAGTCACACAAATTCGCCGATTTCGCCACTTCAGCGCGCGCCTGGTTGATTGGTTTGCCCATTTCGCGGGTGATCATTTGCGCCATTTCTTCGCTACGAGCGCGCAGAGCCTTACCGATATCACGCAGTTTTTCAGCACGATAATCTATATTTGTCTCG  >  NC_000913/1614103‑1614566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A