Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,842,798 |
T→G |
17.1% |
V143G (GTG→GGG) |
gdhA → |
glutamate dehydrogenase, NADP‑specific |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,842,798 | 0 | T | G | 17.1%
| 202.8
/ 2.7
| 90 | V143G (GTG→GGG) | gdhA | glutamate dehydrogenase, NADP‑specific |
| Reads supporting (aligned to +/- strand): ref base T (30/39); new base G (16/4); total (46/44) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTA > NC_000913/1842562‑1843008
|
cgTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGGCTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGCTTTCCATCCGAAACGAAAAAGCG‑AAGGGGAAGGGa > 2:312128/1‑239 (MQ=255)
cgTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGGGGTAAAGGCGGCAGCGACTTCGATCCGAAAGGAAAAAGCG‑AAGGGGAAGGGa > 1:338208/1‑239 (MQ=255)
cgTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGGACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAAACTTCAAAAATGACCTGACTACTCTGCCGTGTGCCGGTGGTAAAGGGGGAACCGCTTTCGCTCTGAAAGGAAAAAAGG‑AAGGGGAAGGGa > 1:1327810/1‑239 (MQ=255)
tggtttggttTGATTATCGCAACCAGATCCAGGCCAACCGGGCATG‑GCGGGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAt < 2:759746/238‑1 (MQ=255)
gggccggggTTGATGAACGCAACCAGATCACGGTCAAGCGTGCATG‑GCGTTTTGAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAt < 2:653067/232‑1 (MQ=255)
cGCAACCCTCTACAGGTCAACCGTGCGTGTGGGTG‑GCAGTTTAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCt < 2:33002/239‑1 (MQ=255)
cGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATTGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑ctttttc > 1:653067/1‑229 (MQ=255)
cGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATTGGCGGGGGTAAAGGCGGCAACGATTTCCAACCGAAAGGAAAAAGCG‑GAGGGGAAGGGGT‑GCG‑TTTTTGGCAgggggt > 2:851281/1‑235 (MQ=255)
cGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGGGAT‑GCG‑TTTTTGCCAGgc > 1:434693/1‑236 (MQ=255)
cGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACCCTGCCGATGGGCGGTGGTAAAGCAGGCAACGATTTCGACCCGAAAGCACAAAGCG‑AAGGGGAAGGGAA‑GGG‑TGTTTGccgaggggt > 2:658878/1‑232 (MQ=255)
gCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCCTCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGCACAAACCTTCAAAACTGCCCTAACTACTCTGCCGATGGGCGGAGGTAAAAGCGGCAGCGGTTTCGATCCCAAAGGAAAAAGCG‑AAGGGGCAAGGCG‑GCG‑TTTTTTCCAGgggccg > 2:748947/1‑237 (MQ=255)
ccAACCAGATGCAGGTCAACCGTGGATG‑GGGTGGGCCAGTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCt < 2:465543/237‑1 (MQ=255)
cccgATACAGTGCACCCGGGCTGG‑GCGGGTGCAGTTCACCCCTGCCATCGGCCCGTTCAAAGGCGGTATGCCCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCtgatga < 2:338208/236‑1 (MQ=255)
aTACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGa < 1:920676/239‑1 (MQ=255)
aTACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGGGAAGGGAT‑GCG‑GTTTTGCCAGGCGCTGATGACTGa > 1:1016579/1‑239 (MQ=255)
atcAGGTCAAACGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTg < 1:496116/235‑1 (MQ=255)
gTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGGATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGCCTACCCTGCCGGTGGGCGGGGGTAAAGGCGACAGCGGTTTCGAACCGAAAGGAAAAAGAG‑CAAGGGAAGGGAA‑GCG‑TTTTTTCCAgagcctgaggaaggaaaggaa > 2:1345930/1‑219 (MQ=255)
gTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGGATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGGGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTa > 1:522170/1‑239 (MQ=255)
gTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGCATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAAGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAA‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTa > 1:72432/1‑239 (MQ=255)
ccccGGGCGTG‑GCGTGTCCCGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGGAAGCGCTTCCAGCCGTCAGGTAACCTTTCCATTCTCAAATTCCTCGGCTTGGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCg < 2:693872/237‑1 (MQ=255)
aCCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAAATCCTCGGCCTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAACGATTTCGATCCGAAAGGAAAAACGG‑AAGGGGAAGGGAG‑TCG‑GTTTTGCCAGGCGCTGATGTATGAACTGTATCg > 1:93422/1‑238 (MQ=255)
tGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCGAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGCTTTCGATCCGAAAGGAAAAAGCG‑AAGGGGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCAcc > 1:117373/1‑239 (MQ=255)
tGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAACGATTTCGCTCCGCAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGTGGACTGAACTGTATCGCCAcc > 1:185002/1‑239 (MQ=255)
tgCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGGGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCCCCTTGGGGC‑GGAt > 1:1026065/1‑239 (MQ=255)
ttCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑GTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGGTCCCg > 1:856594/1‑238 (MQ=255)
ctctGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGTTGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGGTACCGACGtt > 1:539637/1‑238 (MQ=255)
gCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGc < 1:154658/239‑1 (MQ=255)
ccATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATTGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGCAAGGAAAAAGCG‑AAGGGGAAGTGCT‑GCG‑TTTTTGCCAGGCGCTGAGGACTGAACTGTATCGCCACCT‑GGCGCGGGAAACCGACGTTCCGGCa > 2:706490/1‑239 (MQ=255)
ccATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGGG‑AAGGTGAAGGGATGGCG‑TTTTT‑CCCGGCGCTGGTGACTGAACTGTATCGGCAACTGGGGCC‑GGGAACCCACGTTCgggga > 2:1098720/1‑237 (MQ=255)
ccATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑GTTTTGCCAGGCGCTGATGACTGGACTGTATCGCCACCTGGGCGC‑GGGTACCGACGTTCCGGcc > 1:1337865/1‑238 (MQ=255)
ctCGGCCCGTAAAAAGGGGGTCTGCGTTTCCATCCGTAAGTTAACCTTTCCATTCCCAAATTCCTCGGCTTTGAACAATCCTTCAAAAAGGCCCTAACTACTCGGCCTAGTGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAgg < 2:1036462/238‑1 (MQ=255)
accGGCCCGTACAAAGGCGGTATGCGCTTCCATCCAGCAGTTAACCTTTCCAGTCCCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAgg < 1:1305039/237‑1 (MQ=255)
aTCGGCCCTTACAAAGGCGGTTTGGGCTTCCAGCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAgg < 2:434693/239‑1 (MQ=255)
ggCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGGG‑AAGGGGAAGGGCT‑GCG‑TTTTTTCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCCAGGTTCCGGCAGgaga > 1:762462/1‑239 (MQ=255)
aGGCGTTTTGCGCTTCCACCCGTCAGTTAACCTTTCCATTCCCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACGACTCTGCCGATGGGCGGTGGT‑AAGGCGGCAGCGATTTCGAGCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTtgg < 2:374110/239‑1 (MQ=255)
aGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGCTCCGAAAGGCAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGGTGACTGAACTGTATCGCCACCTGGGCGC‑GGAGACCGACGTTCCGGGAGGGGGGAACGGGGTtg > 2:303697/1‑239 (MQ=255)
gTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGGGCTTTCGGGGTtggtgg > 1:206768/1‑238 (MQ=255)
gTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGGGATATCGGGGTtggtgg > 1:1100295/1‑238 (MQ=255)
gTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGAG‑AAGGGGAAAGGAT‑GCG‑TTTTTGCCAGGCGCGGATGACTGAAACGGATCCCCCCCAGGGCGC‑GGGTACCGCCGTTCGGGGAGGGGAATTCGGGGTGgggggt > 2:1178416/1‑239 (MQ=255)
gTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGAAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGGT‑GCG‑TTTTTTCCAGGCGCGGATGACTGAACGGTATCGCCACCCGGGCGC‑ggt > 2:349890/1‑201 (MQ=255)
gTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGT‑AAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTc > 1:374110/1‑239 (MQ=255)
gggcTTCCACTCTTCATTTAACCTTTCCATTCCCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTg < 2:72432/237‑1 (MQ=255)
cTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCt < 2:1005018/162‑1 (MQ=255)
cTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCt > 1:1005018/1‑162 (MQ=255)
cTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGCTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGACGTGAT‑GCG‑TTTTTGCCAGCCGCCGAGGACTGAACTGTATCGCAAACTCGGCGC‑GGGTACCGACGTCCCGGCAGGGGAAATAGGGGTatgtgggggggaaa > 2:316321/1‑231 (MQ=255)
gtCCATCCGTAAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCGGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGAACCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGt < 1:303697/238‑1 (MQ=255)
cATCCGTCAGTTAACCTTTCCATTCTCAAATTCCCGGGCTTTGAAAAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGt < 2:63230/236‑1 (MQ=255)
tCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGCGATCTCGGGGGTGGGGGGCGCGAAGTCGGCt > 1:551358/1‑239 (MQ=255)
gTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGc < 2:1230929/201‑1 (MQ=255)
gTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGc > 1:1230929/1‑201 (MQ=255)
cAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGCCGCTGATGACTGAACTGTATCGCAACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGCCGGCTTTATg > 1:434959/1‑239 (MQ=255)
cgTTAACCTTTCCATTCTCAAATTCCTCGGCTTAGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATgg < 1:1004240/238‑1 (MQ=255)
cattAACCTTTCCATTCTCAAATTCCCCGGCTTTGAACAAACCTGAAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGTCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATgg < 2:539637/237‑1 (MQ=255)
ttAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGGGATATCGGGGTTGGGGGTCGTGAAGTCGGCTTTATGGCg > 1:63230/1‑239 (MQ=255)
cTTTCCATTCTCAATTTCCGCGGCTTTGAAAAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGgat < 2:522170/239‑1 (MQ=255)
ttCCATTCTCAAATTCCTTGGTTTTGAACAAAACTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGgatga < 2:434959/239‑1 (MQ=255)
tCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGTGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑CAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGCTATCGTGGTTGGTGGCCGTGAAGCCGCCTTTATGGCggggggatg > 1:1308284/1‑234 (MQ=255)
tCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAACAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGAATGTACTGTATCGCCACCTGGGCAC‑GGATACCGACGTTCCGGCCGGGGCTATCGGGGTTGGTGGCCGCGAAGTCGGCTTTATGGCGGGgatgac > 1:1080398/1‑238 (MQ=255)
tCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCgg < 2:1182090/187‑1 (MQ=255)
tCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCgg > 1:1182090/1‑187 (MQ=255)
tCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGGGAAGTCGGCTTTATGGCggggggggg > 1:5264/1‑234 (MQ=255)
tCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCCG‑GGATACCGCCGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGGGGGggtgga > 2:1075610/1‑237 (MQ=255)
ccATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGGGGTCGTGAAGTCGGCTTTATGGCggggggtggg > 1:432814/1‑233 (MQ=255)
ccATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGGGATATCGGGGTTGGTGGGCGTGAAGTCGGCTTTATGGCgggggggcgg > 1:520570/1‑233 (MQ=255)
tctcAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGaaaa < 1:981218/239‑1 (MQ=255)
ccAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACCCCGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAg < 1:658878/238‑1 (MQ=255)
ccAAATTCCCGGGCTTTGAACAAACCTTCAAAAATGCCCTGAATAACCCGCCGAGGGGCGGGGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAg < 2:1026065/238‑1 (MQ=255)
cAAATTCCCCGGCTTTGAACAAACCTTCAAAAATGCCCTGGCTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGc < 1:748947/239‑1 (MQ=255)
aaaTTCC‑CCGCTTTGAACAACCCTTCAATAATGGCCTGACCACCCGGCCGATGGGCGGTGGTAAAGGCGGCAGCGATGTCTGTCCGAAAGGAAAAAGCG‑GAGGTGCAGTGAT‑GCG‑TTTTTGCCAGGCGATGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTGGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGcgc < 2:363082/239‑3 (MQ=255)
tcttCCTCGGCTTTGAACAAACCTTAAAAAATGCCCTGACTACCCGGCCGATGGGGGGTGGTAAAGGGGGGCGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGctc < 2:372513/237‑1 (MQ=255)
aaTTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTTCTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGctc < 1:312128/239‑1 (MQ=255)
aaTTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCGGCCGATGGGGGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGctc < 1:781744/239‑1 (MQ=255)
aaTTCCGTGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACCCTGCCGATGGGCGGTGGTAAAGGCGGCAGGGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGctc < 2:206768/239‑1 (MQ=255)
aaTTCCCCGGCTTTGAACAAACCTTCAAAAAAGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGctc < 1:1178416/239‑1 (MQ=255)
aaTCCCGCGGTTTTGAACCAACCTTCAAAAATGCCCTGACTACTCGGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGctc < 1:839784/239‑1 (MQ=255)
cGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCgggggaggggcaaaaagtcttcacac > 1:400813/1‑217 (MQ=255)
ttGAACAAACCTTAAAAAATGCCCTGACTTCTTGGCCAGGGGGGGGGGGTAAAGGGGGCAGGTTTTTCGATCCGAAAGGAAAAAGGG‑AAGGTGAAGTTAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCGGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGTTCTCCAACAATAcc < 2:1026842/239‑1 (MQ=255)
aaCAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGaa < 1:273084/125‑1 (MQ=255)
aaCAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGGGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGaa > 2:273084/1‑125 (MQ=255)
taaaaaaggcctgtgcgatccggCCGGTGGGGGGTTGTAAAGGCGGCAGCGATGTCGATCCGAAGGGAAAAATGG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCGGGCGCTGATGCCTGAACTGTACCGCCACCGGGGCGC‑GGATACCGACGTTCCGGCCGGTGATATGGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTc < 2:1308284/217‑1 (MQ=255)
aaaTGCCCTGGCTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCca < 1:533838/215‑1 (MQ=255)
gccttgacctcttggggtaTGGGGGGGGGTAAGGGGGGCAGGGAGTTCGATCCGAAAGGAAAAGGGG‑AGGGTGAAG‑GTA‑GCGTTTTTTGCCGGGCGCTGATGCCTGACCTGTATCGCGACCTGGGCGC‑GGATCCCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTaa < 2:1016579/221‑1 (MQ=255)
tGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGAGTGAAAAAACTC‑CCCACACAACCCCCACCGTCTTC‑TCCGGGAAggg > 1:992765/1‑238 (MQ=255)
cGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGGGAAGTCGGCTTTATGGCGGGGGTGA‑TGGGAAAGAACGCCAACAAAAAACCCCCCGTCGTCTACCGGTAAGGGctctctcttttg > 1:1249168/1‑228 (MQ=255)
aTGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGA‑TGGAAAAGCACTCCCACAAAACACCCTCGGCCGTT‑CCCCGAAAGGGCCCTTCAtttttcgg > 1:315345/1‑234 (MQ=255)
tGGGGGGGGGTAAGGGCGGCCGGGTTTTGGGTCGGAAAGAAAAAAGCG‑AAGGGGAGTGGAG‑GGG‑TTTTTGCCAGGCGCTGATGAATGAACTGTTCCGCCACCTGGGCGG‑GGATCCCGACGTTCCGGCAGGTGATAGCGGGGTTGGTGGTCGGGAATCCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTggcgg < 2:1192346/238‑1 (MQ=255)
ggggCGGTGGTAAAGGCGGCAGCGTTTTCGATCCGAAAGGAAAAAGGG‑AAGGTGAAGTGAT‑GGT‑TTTTTGCCAGGCGTTGATGACTGAACTGTATCGCCCCCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTggcgg < 1:851281/237‑1 (MQ=255)
gtgccaaaaGG‑AAAAGCGCAAGGTGAAGGTAT‑GCT‑TTTTTCCCAGGCGCTGATGACTGACTTGTATCGCCACCGGGGCCG‑GGATACGGAGGTTCCGGCAGTTGATATCGGGTTTGGTGGTCTTGAAGTCGGCTTTATGGGGGGGAGGA‑TGAAAAAGCTTTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa < 2:185002/233‑1 (MQ=255)
gcgcgaaaaGGAAAAAGGG‑AGGGTTAAGGGGG‑GGG‑TTTTTGCCAGGCTGGGAGGGCTGAAGTGTCCCGCCCCCGGGGCGG‑GGAAACCGGCGTCCCGGAAGGTGATATCGGGGTGGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa < 2:856594/233‑1 (MQ=255)
acccGAAAGGAAAAGGGA‑AGGGTGAAGGGAG‑GGG‑TTTTGGCAAGGCTGGGGTGACTGAATTGGATCGCCCCCGGGGGGC‑GGATCCCGACGTTCCGGCGGGTGATATCGGGGTTGGGGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa < 1:1094038/236‑1 (MQ=255)
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CGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATG‑GCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCG‑AAGGTGAAGTGAT‑GCG‑TTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGC‑GGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGA‑TGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTC‑ACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTA > NC_000913/1842562‑1843008
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
