Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,861,244 A→C 11.7% V30G (GTG→GGG)  ydjL ← putative Zn‑dependent NAD(P)‑binding oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,861,2440AC11.7% 363.6 / 7.8 151V30G (GTG→GGG) ydjLputative Zn‑dependent NAD(P)‑binding oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (61/68);  new base C (3/17);  total (64/87)
Fisher's exact test for biased strand distribution p-value = 7.12e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 151 total aligned reads displayed.

TTTCTGTACAACACAGAAAATCACCTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCTGGGTCT  >  NC_000913/1861008‑1861478
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                           
tttCTGTACAACCCAGAAAATCCCCTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACt                                                                                                                                                                                                                                           <  1:323260/239‑1 (MQ=255)
  tCTGTACAACACAGAAAATCACCTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTAc                                                                                                                                                                                                                                         >  1:515871/1‑239 (MQ=255)
  tCTGTACAACACAGAAAATCACCTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTAc                                                                                                                                                                                                                                         >  2:243250/1‑239 (MQ=255)
  tCTGTACAACACAGAAAATCACCTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCCCCGCAGATTGCCGCGGCTTTAATTTCAATCACTAc                                                                                                                                                                                                                                         >  1:1057669/1‑239 (MQ=255)
   ctttccaacccgtaaaacacccTTGTTCACAGGC‑CGGCCACACCCCGCCAAC‑GTGACCGCTGTTACCAGATACGACTCGTTGCCCCACTGTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACa                                                                                                                                                                                                                                        <  2:770428/219‑1 (MQ=255)
       aaaaccaaaaaaaTC‑CCTTTTTCCCAAGCGCGGACAAACCCCGCAAAC‑TTGACCCCTGTTATCCGGTACGACGCGTTGCCCCCCTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATCCA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTTTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCtt                                                                                                                                                                                                                                    <  2:1089979/230‑1 (MQ=255)
            ccaGAAAATCCCCTGTTTCACAGGC‑CGGACAAACCCCGAAAAC‑GTGACCGCTGTTATCCGATACGCCGCGTTGCCCCCCTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCggg                                                                                                                                                                                                                               <  2:1293016/238‑1 (MQ=255)
             caGAAAATCCCCTTTTTCCAAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGc                                                                                                                                                                                                                              <  1:1067807/239‑1 (MQ=255)
                  aaaccccTTTTTCACGGGC‑CGGACAAACCCCGCAAACTGTG‑CCGCTTTTTTCCGATACGGCGCGTTGCCCCACTTTCCAGTCTTTTGCTTTTTCAACAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCcacac                                                                                                                                                                                                                         <  2:683247/234‑1 (MQ=255)
                   aTCCCCTTGTTCACCGGC‑CGGACAAACCCCCCAAAC‑TGTCCCGCTGTTATCCGATACGACGCGTTGCCTCACTTTCCAGTCTTTGATTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCcacaca                                                                                                                                                                                                                        <  2:82648/239‑1 (MQ=255)
                       ccTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACAACATCTTCCGGGCCACAAATggg                                                                                                                                                                                                                    >  2:1278832/1‑239 (MQ=255)
                            ttCACAGGC‑CGGACAAACCCCCCAAAC‑GGGCCCGGTGTTTTCCGATACCGCGCTTTGCCCCACCTCCCAGTCTTTGACTTTTTCACCAACCCGCCCAATACA‑ACCGGCGAACGCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTtgtg                                                                                                                                                                                                               <  2:822056/239‑1 (MQ=255)
                            ttCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCCCGCCTTTAATTTCAATCCCTCCATCTTCCGGGCCACACATGGGtttgg                                                                                                                                                                                                               >  1:1360748/1‑236 (MQ=255)
                            ttCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCCGTGTTTTCCGATACGACGCGTGGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTtgtg                                                                                                                                                                                                               <  2:1173346/239‑1 (MQ=255)
                              cacaGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCcaccaagggggtggggg                                                                                                                                                                                                             >  2:1158785/1‑225 (MQ=255)
                                        gACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACatcgg                                                                                                                                                                                                      >  1:794569/1‑235 (MQ=255)
                                              cacCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCTACACATGGGTTGTGGGACATCAATCATCTTg                                                                                                                                                                                              >  1:205008/1‑239 (MQ=255)
                                               acCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGGGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCCGATTGCCGCGGCTTTAATTTCAATCAATACATCTTCCGGGCCAAACAAGGGTTGTGGGAAatcaaaaatatata                                                                                                                                                                                             >  2:585240/1‑230 (MQ=255)
                                                   cAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTAAATCTTCCGGGCCACCAATGGGTTGTGGGACATAAACCATCTTTTacc                                                                                                                                                                                          >  2:799596/1‑236 (MQ=255)
                                                      aC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCCGATTGCCGCGGCTTTAATTTCAATCACCACATCTTCCGGGCCACACATGGGTTGTGGGACATCAAACACCTTGTAcccccc                                                                                                                                                                                      >  2:1179556/1‑239 (MQ=255)
                                                                    tATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCa                                                                                                                                                                         <  1:243250/239‑1 (MQ=255)
                                                                           tACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑CCCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAg                                                                                                                                                                  <  1:762405/239‑1 (MQ=255)
                                                                           tACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCTCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGa                                                                                                                                                                   >  2:1340017/1‑238 (MQ=255)
                                                                           tACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTATCCGCCAAAAGCCTGGCCAAAccag                                                                                                                                                                   >  2:29298/1‑236 (MQ=255)
                                                                           tACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGa                                                                                                                                                                   >  1:372406/1‑238 (MQ=255)
                                                                           tACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCCTTAATTTCAATCCCTCCATCTTCCGGGCCCCCCATGGGTTGTGGGCGCTCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCgt                                                                                                                                                                   >  1:74555/1‑237 (MQ=255)
                                                                            aggacgCGTTGCCCCATTTTCCAATCTTTGACTTGTTCAACAACCTGAGGAATACA‑CCCTGCGAACTCATGGCCGCGGATAGAGTTAAACTGATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAAGCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGc                                                                                                                                                                 <  1:269005/237‑1 (MQ=255)
                                                                             ccccggtttcccccccTTTCCATTCTTTTACTTTTTCCCCAACCGGCCCAATACA‑ACCCGCGAACTCATGGCCGGCGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGcc                                                                                                                                                                <  2:387177/229‑1 (MQ=255)
                                                                                cgcgTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATTCA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAg                                                                                                                                                              <  1:983240/238‑1 (MQ=255)
                                                                                    ttGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCCATCATCTTGTATCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCtt                                                                                                                                                         >  1:832784/1‑239 (MQ=255)
                                                                                       ccccACTTTCCAGTGTTTGACTTTTTCCCCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCa                                                                                                                                                      <  1:614835/239‑1 (MQ=255)
                                                                                         ccccTTTCCCGTTTTTTCCTTTTTCCCCAACCT‑CCCCATCCACACCCTCCAACTCATGGCCGCGGTTATAGTTAACCTCATCAGAACCTCTTTCATCTTTGTAGTTCTTCATGTCTGGCCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACGTCTTCCGGGCCACCCATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCAtt                                                                                                                                                    <  2:581288/236‑1 (MQ=255)
                                                                                         ccccTTTCCCGTCTTTTGCTTTTTCAACAACCTGCGCAAGACA‑ACCTGCGAACCCATGGCCGCGGAAAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGAAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCAtt                                                                                                                                                    <  2:49931/236‑1 (MQ=255)
                                                                                            cTTTCCCGTCTTTTCCTTTTTCCCCATCCCGCCCAATACA‑GCCAGCGACCTCAGGGCCGGGGATAGAGTTAAACTCTCCAGAACCGCTACCGACATTGTAGTGCTTCGTGTGTGCGCCGCAGATTGCCGTGGCTTTAATTTCAATCTCTGCGTCTTCCGGGCCACCCATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCg                                                                                                                                                 <  2:205008/239‑1 (MQ=255)
                                                                                             tttCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCCCTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGt                                                                                                                                                <  1:461935/239‑1 (MQ=255)
                                                                                              ttcatgTCTTTGCTTTTTCCCCCACCCTCCGAAATAAA‑ACCGGCGAACTGACGGGCGCGTATAGAGTTAACCGCATCAGAGCCGCTATCGACAGTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAAGTACTACACCTTCCGGGCCACACATGGGTTTTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTc                                                                                                                                               <  2:1071660/234‑1 (MQ=255)
                                                                                                   ttttttGATTTTTTCCCCACCCGGGCCAATACA‑ACCTGCGAACTCTGGGCCGCGGATAGATGTAAACTCATCAGAACCGCTAGCGACATTGTATTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCCCACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCct                                                                                                                                          <  2:363499/236‑1 (MQ=255)
                                                                                                   ttCTTTGATTTTTTCCCCAACCTGCCCAATACA‑CCCTGCGACCTCTTGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCct                                                                                                                                          <  2:496509/238‑1 (MQ=255)
                                                                                                     ttttGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCctct                                                                                                                                        <  1:35187/238‑1 (MQ=255)
                                                                                                     cTTTGACTTTTTCCCCAACCTGCGCAATCCA‑ACCTGCGAACTCATGGCCGGGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCctc                                                                                                                                         <  1:1296270/238‑1 (MQ=255)
                                                                                                              tttCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCCCCCATGGGTTGTGGGACATCAATCATCTTGTAGCCCCCAAAGGCCTTGCCAAACCGCGCCAGAGCTTTCATTGCGTCATCCCCTGGGTTTAGt                                                                                                                               >  2:35187/1‑239 (MQ=255)
                                                                                                              tttCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGt                                                                                                                               <  1:246334/239‑1 (MQ=255)
                                                                                                               ttcccccaccttgccAATACA‑ACCTGGCATCTCAGGGCCGGGGTAAGTGTTAACCTCACCGGAACCGCTATCGACATGTTAGGTCTTCAGGGCTGCGCCGAAGTTGGCCGGGGGTTTAATTCCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGtt                                                                                                                              <  2:664387/225‑1 (MQ=255)
                                                                                                                         tGCCCAATACA‑ACCGGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGAt                                                                                                                    <  1:1179556/239‑1 (MQ=255)
                                                                                                                         cgcgcAATACA‑CCCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGAt                                                                                                                    <  1:1158785/238‑1 (MQ=255)
                                                                                                                         cccccAATCCA‑CCCTGCGAACTCTTGGCCGCGGTTAGGGTTAAACTCATCATAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTCCATCTCCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGAt                                                                                                                    <  2:1062747/235‑1 (MQ=255)
                                                                                                                         cccccAATACA‑CCCGGCGAACCCAGGGCCGGGGATAGAGTTAAACTCATCAGAACCGCTATCGACATGTGAGTGCTTCAGGTCTGCGCCGCAGATTGCCGGGGCTTTAATTTCAACCACTACATCTTCCGGGCCACACATGGGTTGTGGGACAGCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGAt                                                                                                                    <  2:1164558/235‑1 (MQ=255)
                                                                                                                           cgcAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGtt                                                                                                                              >  1:577650/1‑227 (MQ=255)
                                                                                                                              aaTACA‑ACCTGGGAACTCATGGCCGCTGATATAATTAAACTCATCAGAACCGCTTTCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTTCCGCGGCTTTAATTTCAATCCCTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCca                                                                                                               <  1:927736/239‑1 (MQ=255)
                                                                                                                               aTACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGATCCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCcat                                                                                                              <  1:271646/239‑1 (MQ=255)
                                                                                                                                      ccTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTtgtg                                                                                                                                                                                                               >  1:1308745/1‑136 (MQ=255)
                                                                                                                                      ccTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGCCGTCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGTGCCCGTGTTTTCCTTGCGTCAACACCTGTGTTTAGTTTTGCTTAGATgtacataaaac                                                                                                         >  2:1094549/1‑228 (MQ=255)
                                                                                                                                         gCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTa                                                                                                      >  1:535321/1‑238 (MQ=255)
                                                                                                                                                        cgGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCGTGGGTTAGTTTTGCTTAAATGGCCATCAAACTTACCCACATGTTTTTTgt                                                                                      >  2:758663/1‑238 (MQ=255)
                                                                                                                                                            tAGAGTTAAACTCATCAGACCCGCTATCGACATTGTAGTGCTTCATGTCGGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCCCTACTTCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGt                                                                                   <  1:1278832/238‑1 (MQ=255)
                                                                                                                                                                    aaCTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAg                                                                                                                                                                  >  2:931660/1‑151 (MQ=255)
                                                                                                                                                                         atcaGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGCCCTTGCCAAACCGAGCCAGTGCTTTCATTCCGTCATCCTCTGCGGTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGCATTTTGCGGCCAACATTAAATCTg                                                                     >  1:889926/1‑239 (MQ=255)
                                                                                                                                                                         atcaGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAACCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTTCGTCATCCTCTTTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAACCTg                                                                     >  1:1022911/1‑239 (MQ=255)
                                                                                                                                                                         atcaGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATCACCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCATCCAAAGGACTTGCCAAACCGAGCTCGTGCTTTCATTGCGACATCCACTGTGGTTAGTTTTGCCTAGCTGGCCCTACTACCTACACACATAATATTTGAGGGCAACATTAAATCtt                                                                     >  2:788710/1‑238 (MQ=255)
                                                                                                                                                                           caGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCCAACCGCGCCAGTGCTTTCCTTGCGTCATCCCCTGTGTTTGGTTTTGCTTAGATGGCCATCATACTTACCCACATAATTTTTGAGGCCAACATTAAATCTTT‑a                                                                  >  2:384501/1‑239 (MQ=255)
                                                                                                                                                                              aaCCGATATCGCAAATGTTGTGCTTCAAGGCTGCCCCGCAGATTGCCGCGGCTTTAATTTCAATCCCTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑aaaa                                                               <  1:29298/239‑1 (MQ=255)
                                                                                                                                                                                 ccttattctcttttttgtctttCATTTCGGCCGCGGAGGTTGCCGCGGTTTTAATTTCAATCCAGACATTTTCCGGGGCGCCAATGGGTTGTGGGCCATCTATCCTCTTGGAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAacac                                                            <  2:74555/219‑1 (MQ=255)
                                                                                                                                                                                 cctcttggagattgtattttctaaTGTCTGCGCCGCAGTTTGCCGCGGTTTTAATTTCAATCACTCCATCTCCCGGGCCACCCATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAacac                                                            <  2:285693/216‑1 (MQ=255)
                                                                                                                                                                                   cTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGTGCCCGTGCTTTCCTTTAGTCGTCCTCTGTGTTTCGTTTTGCTTAGATGGCCATCATCCTTACCACCATGATTTTTTAGGTGAAATTTAAATTTGT‑AAAaccaaa                                                          >  2:252208/1‑235 (MQ=255)
                                                                                                                                                                                   cTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAg                                                                                                                                                              <  2:200677/140‑1 (MQ=255)
                                                                                                                                                                                   cTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAg                                                                                                                                                              >  1:200677/1‑140 (MQ=255)
                                                                                                                                                                                   cTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAg                                                          >  1:501497/1‑239 (MQ=255)
                                                                                                                                                                                   cTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGCCATCCTCTGTGTTTCGTTTTTCTTAGATGGCCCTATTACTTACCCACATGATTTTTTAGGTACACCTTAAATCGGA‑AAAAaacaa                                                          >  2:489034/1‑238 (MQ=255)
                                                                                                                                                                                             tgttgggCTTCATGTCTGCGCCGCAGATTGCCGGGGTTTTAATTTCAATCACTGCATCTTCCGGGCCACACATGGGTTGTGGGACACCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGtt                                                                                                                                   <  2:555421/151‑1 (MQ=255)
                                                                                                                                                                                             tGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTCAATGGCCATCATACTTACCCCCATGATTTTTGAGGTCAAAATTAATTCTGT‑aaaaacaagaaaagga                                                   >  2:908629/1‑224 (MQ=255)
                                                                                                                                                                                                tgtgtttttggccTGCGCCGCAGATTGCCGCGGCTTTAATTTCAAACCCTTCATCGTCCGGGCCACACATGGGTTGGGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCg                                             <  2:947003/227‑1 (MQ=255)
                                                                                                                                                                                                  tGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCCCTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGAttttt                                                                                        <  2:974041/195‑1 (MQ=255)
                                                                                                                                                                                                  tGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGAttttt                                                                                        >  1:974041/1‑195 (MQ=255)
                                                                                                                                                                                                    cTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGtttt                                         >  1:947003/1‑239 (MQ=255)
                                                                                                                                                                                                       cATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACCCATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGGGTTTAGTTTTGCt                                                                                                                         >  1:555421/1‑157 (MQ=255)
                                                                                                                                                                                                       cATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACa                                      >  1:75749/1‑239 (MQ=255)
                                                                                                                                                                                                       cATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACa                                      >  1:471740/1‑239 (MQ=255)
                                                                                                                                                                                                         tGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCCCTGATTTTAGTTTTGCTTAGTTGGCCATCATCATTACCCACTTGATTTTTTAGGTCTAAATTAAATCTTTAAAAACACA‑ATAACGATCTGCGTTTTaaaa                                     >  2:737049/1‑238 (MQ=255)
                                                                                                                                                                                                         tGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGAACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACCTTAAATCTGT‑AAAACACAGATAATAATCTGCGTTTTaaaaa                                    >  2:521091/1‑238 (MQ=255)
                                                                                                                                                                                                          ttCTGCGCCGCGGATGGCCGGGGCTTTAATTTCAAACCCTTAACCCTCCTGGCCACACATGGGTTGTGGGACACCAATCATCTTGTAGCCCGCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTACGTCAACCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATGCTTTCCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACt                                   <  1:788710/238‑1 (MQ=255)
                                                                                                                                                                                                          gtgtGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACt                                   <  1:370817/236‑1 (MQ=255)
                                                                                                                                                                                                               cgccgcAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCGATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGGGCTTTCATTGCGTCATCCTCTGGGTTTAGTTTTGCTTAGAGGGCCATCATACTTACCACCATGTTTTTTTAGGTCAACATTAAAATTGT‑AAAACAAAaataataactgacgtttaccaacccaaca                              >  2:558053/1‑216 (MQ=255)
                                                                                                                                                                                                               cgccgcAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCCATCATCTTGAAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTAACCACATGATTTTTGAGGTCAACATTAAATCTGT‑TAAACAACGTTAATGATCTGCGTTTTACAATTCAGAt                              >  1:88553/1‑239 (MQ=255)
                                                                                                                                                                                                               cgccgcAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑aa                                                                 >  1:779451/1‑204 (MQ=255)
                                                                                                                                                                                                               cgccgcAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑aa                                                                 <  2:779451/204‑1 (MQ=255)
                                                                                                                                                                                                               cgccgcAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATAATCTGCGTTTTACAACTCAGa                               >  1:721066/1‑238 (MQ=255)
                                                                                                                                                                                                               cgccccAGTTTGCCCGGTCTTTAATTTAAATCACTACGTCTTCCGGGCCCCACATGGGTTGTGGGACATCAACCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGAt                              <  2:501497/239‑1 (MQ=255)
                                                                                                                                                                                                                cccgaAGATTGCCGCGTGTTTAATTTCAATCCCTACATCGTCCGGGCCCCACGTGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGAt                              <  1:920884/237‑1 (MQ=255)
                                                                                                                                                                                                                        ttgccgggttgttatattCAATCACTACGTCCTCCGGGCCCATCAATGTTTGTGGGACATCAATCATCTTGTGGCCCCCAAAGGCGTGGACAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGTCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTa                      <  2:52981/222‑1 (MQ=255)
                                                                                                                                                                                                                          gCCGCGGCTTTAATTTCAATCACTTCATCCTCGGGTCCTGACTTGGGTTTTGGGAAATCCATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACg                    <  1:1124010/238‑1 (MQ=255)
                                                                                                                                                                                                                            cgcgTCTTTAATTTCAATCACTACATCTTCCCGGCCACACATGGGATGTGGGACATCAATCATCTTGCAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTAATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTCCCCACATGATTTTTGATGTCAAAATTAAATCTTTCAAAACCCA‑ATAATAATCTGCGTTTTACAACTCAGACcaacactaaccaa                 >  2:141057/1‑228 (MQ=255)
                                                                                                                                                                                                                               ggttttAATTTCAATCCCTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGaaa              <  1:812265/236‑1 (MQ=255)
                                                                                                                                                                                                                                     taTTTTAATCCCTATAACCTCCGGGCCCAATCGGGGTGGTGGGAAACCAATCATCTTGTCGCCGCCAAAGGCCTTGCCAAACCGGTCCAGTGCGTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCt        <  2:786897/238‑1 (MQ=255)
                                                                                                                                                                                                                                     aaTTTCAATCCCTACACCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCt        <  1:1373797/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aaTTTCAATCACTACATCTTCCGGGCCAAACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCt        <  1:585240/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCTGGGt    <  1:1076743/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tCAAACACTACATCTTCCGGGCCACACATGGGTGGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCTGGGt    <  1:737049/239‑1 (MQ=255)
                                                                                                                                                                                                                                           aaTCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGAttttt                                                                                        <  1:654320/154‑1 (MQ=255)
                                                                                                                                                                                                                                           aaTCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGAttttt                                                                                        >  2:654320/1‑154 (MQ=255)
                                                                                                                                                                                                                                           aaTCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCTGGGTCt  >  1:329514/1‑239 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                           
TTTCTGTACAACACAGAAAATCACCTTGTTCACAGGC‑CGGACAAACACCGCAAAC‑GTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATACA‑ACCTGCGAACTCATGGCCGCGGATAGAGTTAAACTCATCAGAACCGCTATCGACATTGTAGTGCTTCATGTCTGCGCCGCAGATTGCCGCGGCTTTAATTTCAATCACTACATCTTCCGGGCCACACATGGGTTGTGGGACATCAATCATCTTGTAGCCGCCAAAGGCCTTGCCAAACCGAGCCAGTGCTTTCATTGCGTCATCCTCTGTGTTTAGTTTTGCTTAGATGGCCATCATACTTACCCACATGATTTTTGAGGTCAACATTAAATCTGT‑AAAACACAGATAATGATCTGCGTTTTACAACTCAGATCACAATTACGCAGAAAATGGCTGGGTCT  >  NC_000913/1861008‑1861478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A